BLASTX nr result

ID: Salvia21_contig00001200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00001200
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein C...   273   2e-71
gb|ACO51066.1| chloroplast chlorophyll A-B binding protein [Goss...   270   2e-70
gb|ABK96685.1| unknown [Populus trichocarpa x Populus deltoides]      267   2e-69
ref|XP_002329192.1| light-harvesting complex II protein Lhcb5 [P...   267   2e-69
gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotia...   265   5e-69

>ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
           [Vitis vinifera] gi|147770824|emb|CAN76428.1|
           hypothetical protein VITISV_023565 [Vitis vinifera]
           gi|297734735|emb|CBI16969.3| unnamed protein product
           [Vitis vinifera]
          Length = 290

 Score =  273 bits (699), Expect = 2e-71
 Identities = 137/176 (77%), Positives = 140/176 (79%), Gaps = 2/176 (1%)
 Frame = +3

Query: 159 GVSEMLGNKXXXXXXXXXXXXXXXXXTFKTVALFSXXXXXXXXXXXXX--PADEELAKWY 332
           GVSEMLGN                  TFKTVALFS               PADEELAKWY
Sbjct: 14  GVSEMLGNPLNFSGASRTAPSASSPATFKTVALFSKKKAAPAKAKPAPVSPADEELAKWY 73

Query: 333 GPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAML 512
           GPDRRIFLP+GLLDRSEIP YLTGEVPGDYGYDPFGLSKKPEDFAKYQ YELIHARWAML
Sbjct: 74  GPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAML 133

Query: 513 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAVIAEV 680
           GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL+ AV+AEV
Sbjct: 134 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIFAVVAEV 189


>gb|ACO51066.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
          Length = 240

 Score =  270 bits (690), Expect = 2e-70
 Identities = 138/177 (77%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
 Frame = +3

Query: 159 GVSEMLGNKXXXXXXXXXXXXXXXXXT-FKTVALFSXXXXXXXXXXXXX--PADEELAKW 329
           GVSEMLGN                  + FKTVALFS               PADEELAKW
Sbjct: 14  GVSEMLGNPLNFSGGARSSAPTPSNSSIFKTVALFSKKKAAPPKPKAAAVAPADEELAKW 73

Query: 330 YGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAM 509
           YGPDRRIFLP+GLLDRSEIPEYL GEVPGDYGYDPFGLSKKPEDFAKYQ YELIHARWAM
Sbjct: 74  YGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAM 133

Query: 510 LGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAVIAEV 680
           LGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAV+AEV
Sbjct: 134 LGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAVVAEV 190


>gb|ABK96685.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 302

 Score =  267 bits (682), Expect = 2e-69
 Identities = 136/176 (77%), Positives = 140/176 (79%), Gaps = 2/176 (1%)
 Frame = +3

Query: 159 GVSEMLGNKXXXXXXXXXXXXXXXXX-TFKTVALFSXXXXXXXXXXXXX-PADEELAKWY 332
           GVSEMLGN                   TFKTVALFS              PAD ELAKWY
Sbjct: 14  GVSEMLGNPLNFSGATRSASPAATTPATFKTVALFSKKKAAPKPKPSAVSPADVELAKWY 73

Query: 333 GPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAML 512
           GPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP+DF KYQ +ELIHARWAML
Sbjct: 74  GPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFEKYQAFELIHARWAML 133

Query: 513 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAVIAEV 680
           GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV+AV+AEV
Sbjct: 134 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEV 189


>ref|XP_002329192.1| light-harvesting complex II protein Lhcb5 [Populus trichocarpa]
           gi|118487642|gb|ABK95646.1| unknown [Populus
           trichocarpa] gi|222870973|gb|EEF08104.1|
           light-harvesting complex II protein Lhcb5 [Populus
           trichocarpa]
          Length = 290

 Score =  267 bits (682), Expect = 2e-69
 Identities = 136/176 (77%), Positives = 140/176 (79%), Gaps = 2/176 (1%)
 Frame = +3

Query: 159 GVSEMLGNKXXXXXXXXXXXXXXXXX-TFKTVALFSXXXXXXXXXXXXX-PADEELAKWY 332
           GVSEMLGN                   TFKTVALFS              PAD ELAKWY
Sbjct: 14  GVSEMLGNPLNFSGATRSASPAASTPATFKTVALFSKKKPAPKPKPSAVSPADVELAKWY 73

Query: 333 GPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAML 512
           GPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP+DF KYQ +ELIHARWAML
Sbjct: 74  GPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFEKYQAFELIHARWAML 133

Query: 513 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAVIAEV 680
           GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV+AV+AEV
Sbjct: 134 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEV 189


>gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotiana tabacum]
          Length = 285

 Score =  265 bits (678), Expect = 5e-69
 Identities = 129/150 (86%), Positives = 132/150 (88%), Gaps = 2/150 (1%)
 Frame = +3

Query: 237 TFKTVALFSXXXXXXXXXXXXX--PADEELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEV 410
           TFKTVALF                PADEELAKWYGPDRRIFLPDGLLDRSEIPEYL GEV
Sbjct: 35  TFKTVALFKKKAAAAPAKKAVAIAPADEELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV 94

Query: 411 PGDYGYDPFGLSKKPEDFAKYQGYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFK 590
           PGDYGYDPFGLSKKPEDFAKYQ YELIHARWAMLGAAGF+IPEAFNKFGA+CGPEAVWFK
Sbjct: 95  PGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFVIPEAFNKFGADCGPEAVWFK 154

Query: 591 TGALLLDGNTLNYFGKNIPINLVVAVIAEV 680
           TGALLLDGNTLNYFGKNIPINLVVAV+AEV
Sbjct: 155 TGALLLDGNTLNYFGKNIPINLVVAVVAEV 184


Top