BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00001057
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti...   211   6e-53
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I...   199   2e-49
ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu...   197   6e-49
ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-48
ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, I...   194   6e-48

>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
           gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
           polymerase IIb [Nicotiana tabacum]
          Length = 143

 Score =  211 bits (536), Expect = 6e-53
 Identities = 105/116 (90%), Positives = 108/116 (93%)
 Frame = -3

Query: 496 IEEDNNAAEEILDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPV 317
           IEEDN   E+I D + GEG+EK EQE VERPRKTSKYMTKYERARILGTRALQISMNAPV
Sbjct: 27  IEEDNGNNEDIPDPLLGEGEEKTEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPV 86

Query: 316 MVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 149
           MVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 87  MVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 142


>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 isoform 1 [Vitis vinifera]
           gi|297741100|emb|CBI31831.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  199 bits (506), Expect = 2e-49
 Identities = 100/116 (86%), Positives = 106/116 (91%)
 Frame = -3

Query: 493 EEDNNAAEEILDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVM 314
           E +NN  E++ DA+E +  EK+  E VERPRKTSKYMTKYERARILGTRALQISMNAPVM
Sbjct: 29  EAENNNNEDVPDALEEQ--EKEVHETVERPRKTSKYMTKYERARILGTRALQISMNAPVM 86

Query: 313 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146
           VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 87  VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus
           communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA
           polymerase subunit rpb6, putative [Ricinus communis]
          Length = 124

 Score =  197 bits (502), Expect = 6e-49
 Identities = 100/115 (86%), Positives = 105/115 (91%)
 Frame = -3

Query: 490 EDNNAAEEILDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMV 311
           E+NN  +   D +E E  +K+EQEA ERPRKTSKYMTKYERARILGTRALQISMNAPVMV
Sbjct: 12  ENNNNEDVPGDPIETE--DKEEQEAAERPRKTSKYMTKYERARILGTRALQISMNAPVMV 69

Query: 310 ELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146
           ELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 70  ELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 124


>ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|222869446|gb|EEF06577.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  194 bits (493), Expect = 6e-48
 Identities = 97/115 (84%), Positives = 105/115 (91%)
 Frame = -3

Query: 490 EDNNAAEEILDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMV 311
           E+NN  ++  + +E E  +K+EQ  VERPRKTSK+MTKYERARILGTRALQISMNAPVMV
Sbjct: 31  ENNNNEDDTGEPIETE--DKEEQAPVERPRKTSKFMTKYERARILGTRALQISMNAPVMV 88

Query: 310 ELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146
           ELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 89  ELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 [Vitis vinifera] gi|302143496|emb|CBI22057.3|
           unnamed protein product [Vitis vinifera]
          Length = 141

 Score =  194 bits (493), Expect = 6e-48
 Identities = 99/116 (85%), Positives = 104/116 (89%)
 Frame = -3

Query: 493 EEDNNAAEEILDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVM 314
           + DNN  E+I DA+E     ++EQ  VER RKTSKYMTKYERARILGTRALQISMNAPVM
Sbjct: 29  DADNNNNEDIPDAIE---TAEKEQVPVERSRKTSKYMTKYERARILGTRALQISMNAPVM 85

Query: 313 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146
           VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 86  VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 141