BLASTX nr result
ID: Salvia21_contig00001056
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Salvia21_contig00001056 (498 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti... 214 4e-54 ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I... 203 1e-50 ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu... 201 7e-50 ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, I... 198 4e-49 emb|CAN62586.1| hypothetical protein VITISV_000776 [Vitis vinifera] 198 4e-49 >gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum] gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA polymerase IIb [Nicotiana tabacum] Length = 143 Score = 214 bits (546), Expect = 4e-54 Identities = 106/116 (91%), Positives = 109/116 (93%) Frame = -3 Query: 496 IEEDNNAAEEIPDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPV 317 IEEDN E+IPD + GEG+EK EQE VERPRKTSKYMTKYERARILGTRALQISMNAPV Sbjct: 27 IEEDNGNNEDIPDPLLGEGEEKTEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPV 86 Query: 316 MVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 149 MVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG Sbjct: 87 MVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 142 >ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform 1 [Vitis vinifera] gi|297741100|emb|CBI31831.3| unnamed protein product [Vitis vinifera] Length = 142 Score = 203 bits (516), Expect = 1e-50 Identities = 101/116 (87%), Positives = 107/116 (92%) Frame = -3 Query: 493 EEDNNAAEEIPDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVM 314 E +NN E++PDA+E + EK+ E VERPRKTSKYMTKYERARILGTRALQISMNAPVM Sbjct: 29 EAENNNNEDVPDALEEQ--EKEVHETVERPRKTSKYMTKYERARILGTRALQISMNAPVM 86 Query: 313 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD Sbjct: 87 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142 >ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus communis] Length = 124 Score = 201 bits (510), Expect = 7e-50 Identities = 104/119 (87%), Positives = 109/119 (91%), Gaps = 3/119 (2%) Frame = -3 Query: 493 EED--NNAAEEIP-DAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNA 323 EED NN E++P D +E E +K+EQEA ERPRKTSKYMTKYERARILGTRALQISMNA Sbjct: 8 EEDVENNNNEDVPGDPIETE--DKEEQEAAERPRKTSKYMTKYERARILGTRALQISMNA 65 Query: 322 PVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146 PVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD Sbjct: 66 PVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 124 >ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Vitis vinifera] gi|302143496|emb|CBI22057.3| unnamed protein product [Vitis vinifera] Length = 141 Score = 198 bits (503), Expect = 4e-49 Identities = 100/116 (86%), Positives = 105/116 (90%) Frame = -3 Query: 493 EEDNNAAEEIPDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVM 314 + DNN E+IPDA+E ++EQ VER RKTSKYMTKYERARILGTRALQISMNAPVM Sbjct: 29 DADNNNNEDIPDAIE---TAEKEQVPVERSRKTSKYMTKYERARILGTRALQISMNAPVM 85 Query: 313 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD Sbjct: 86 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 141 >emb|CAN62586.1| hypothetical protein VITISV_000776 [Vitis vinifera] Length = 140 Score = 198 bits (503), Expect = 4e-49 Identities = 100/116 (86%), Positives = 105/116 (90%) Frame = -3 Query: 493 EEDNNAAEEIPDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVM 314 + DNN E+IPDA+E ++EQ VER RKTSKYMTKYERARILGTRALQISMNAPVM Sbjct: 28 DADNNNNEDIPDAIE---TAEKEQVPVERSRKTSKYMTKYERARILGTRALQISMNAPVM 84 Query: 313 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD Sbjct: 85 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 140