BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00001056
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti...   214   4e-54
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I...   203   1e-50
ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu...   201   7e-50
ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, I...   198   4e-49
emb|CAN62586.1| hypothetical protein VITISV_000776 [Vitis vinifera]   198   4e-49

>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
           gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
           polymerase IIb [Nicotiana tabacum]
          Length = 143

 Score =  214 bits (546), Expect = 4e-54
 Identities = 106/116 (91%), Positives = 109/116 (93%)
 Frame = -3

Query: 496 IEEDNNAAEEIPDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPV 317
           IEEDN   E+IPD + GEG+EK EQE VERPRKTSKYMTKYERARILGTRALQISMNAPV
Sbjct: 27  IEEDNGNNEDIPDPLLGEGEEKTEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPV 86

Query: 316 MVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 149
           MVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 87  MVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 142


>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 isoform 1 [Vitis vinifera]
           gi|297741100|emb|CBI31831.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  203 bits (516), Expect = 1e-50
 Identities = 101/116 (87%), Positives = 107/116 (92%)
 Frame = -3

Query: 493 EEDNNAAEEIPDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVM 314
           E +NN  E++PDA+E +  EK+  E VERPRKTSKYMTKYERARILGTRALQISMNAPVM
Sbjct: 29  EAENNNNEDVPDALEEQ--EKEVHETVERPRKTSKYMTKYERARILGTRALQISMNAPVM 86

Query: 313 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146
           VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 87  VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus
           communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA
           polymerase subunit rpb6, putative [Ricinus communis]
          Length = 124

 Score =  201 bits (510), Expect = 7e-50
 Identities = 104/119 (87%), Positives = 109/119 (91%), Gaps = 3/119 (2%)
 Frame = -3

Query: 493 EED--NNAAEEIP-DAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNA 323
           EED  NN  E++P D +E E  +K+EQEA ERPRKTSKYMTKYERARILGTRALQISMNA
Sbjct: 8   EEDVENNNNEDVPGDPIETE--DKEEQEAAERPRKTSKYMTKYERARILGTRALQISMNA 65

Query: 322 PVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146
           PVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 66  PVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 124


>ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 [Vitis vinifera] gi|302143496|emb|CBI22057.3|
           unnamed protein product [Vitis vinifera]
          Length = 141

 Score =  198 bits (503), Expect = 4e-49
 Identities = 100/116 (86%), Positives = 105/116 (90%)
 Frame = -3

Query: 493 EEDNNAAEEIPDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVM 314
           + DNN  E+IPDA+E     ++EQ  VER RKTSKYMTKYERARILGTRALQISMNAPVM
Sbjct: 29  DADNNNNEDIPDAIE---TAEKEQVPVERSRKTSKYMTKYERARILGTRALQISMNAPVM 85

Query: 313 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146
           VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 86  VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 141


>emb|CAN62586.1| hypothetical protein VITISV_000776 [Vitis vinifera]
          Length = 140

 Score =  198 bits (503), Expect = 4e-49
 Identities = 100/116 (86%), Positives = 105/116 (90%)
 Frame = -3

Query: 493 EEDNNAAEEIPDAVEGEGDEKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVM 314
           + DNN  E+IPDA+E     ++EQ  VER RKTSKYMTKYERARILGTRALQISMNAPVM
Sbjct: 28  DADNNNNEDIPDAIE---TAEKEQVPVERSRKTSKYMTKYERARILGTRALQISMNAPVM 84

Query: 313 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 146
           VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 85  VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 140