BLASTX nr result

ID: Salvia21_contig00000949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00000949
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]   130   1e-28
ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana] gi|...   130   1e-28
ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata sub...   124   6e-27
ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein...   117   1e-24
ref|XP_004134905.1| PREDICTED: putative F-box/LRR-repeat protein...   117   1e-24

>gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]
          Length = 302

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/83 (73%), Positives = 67/83 (80%)
 Frame = +3

Query: 105 WLELPREITSAILHKLGAIEILTTAQSVCTAWQSVCRDPSMWRCIDMRNTGDLWDMPYNL 284
           W ELP E+TSAILH+LGAIEIL  AQ VC +W+ VC+DPSMWR IDM N GDL DM YNL
Sbjct: 19  WTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNL 78

Query: 285 EKMCRHAVDRSQGQLIDINIEYF 353
           E MCRHAVDRSQG L+DI I YF
Sbjct: 79  EIMCRHAVDRSQGGLVDIGIWYF 101


>ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana]
           gi|75335768|sp|Q9M0U9.1|SKI19_ARATH RecName: Full=F-box
           protein SKIP19; AltName: Full=F-box/LRR-repeat protein
           20; AltName: Full=SKP1-interacting partner 19
           gi|7267306|emb|CAB81088.1| N7 like-protein [Arabidopsis
           thaliana] gi|27765050|gb|AAO23646.1| At4g05460
           [Arabidopsis thaliana] gi|110742947|dbj|BAE99368.1| N7
           like-protein [Arabidopsis thaliana]
           gi|332657123|gb|AEE82523.1| F-box protein SKIP19
           [Arabidopsis thaliana]
          Length = 302

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/83 (73%), Positives = 67/83 (80%)
 Frame = +3

Query: 105 WLELPREITSAILHKLGAIEILTTAQSVCTAWQSVCRDPSMWRCIDMRNTGDLWDMPYNL 284
           W ELP E+TSAILH+LGAIEIL  AQ VC +W+ VC+DPSMWR IDM N GDL DM YNL
Sbjct: 19  WTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNL 78

Query: 285 EKMCRHAVDRSQGQLIDINIEYF 353
           E MCRHAVDRSQG L+DI I YF
Sbjct: 79  EIMCRHAVDRSQGGLVDIGIWYF 101


>ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320679|gb|EFH51101.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/83 (68%), Positives = 67/83 (80%)
 Frame = +3

Query: 105 WLELPREITSAILHKLGAIEILTTAQSVCTAWQSVCRDPSMWRCIDMRNTGDLWDMPYNL 284
           W ELP E+TS ILH+LGAIEIL  AQ VC +W+ VC+DPSMWR IDM N GDL DM +NL
Sbjct: 18  WTELPPELTSLILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLEDMEFNL 77

Query: 285 EKMCRHAVDRSQGQLIDINIEYF 353
           + MCRHAVDRSQG L++I+I YF
Sbjct: 78  DIMCRHAVDRSQGGLVEIDIWYF 100


>ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 273

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = +3

Query: 105 WLELPREITSAILHKLGAIEILTTAQSVCTAWQSVCRDPSMWRCIDMRNTGDLWDMPYNL 284
           WLELP E+   ILHKLGAIEILTTAQ+VC+ W  +C+DP +WR IDM N+GDL    + L
Sbjct: 12  WLELPAEVIFVILHKLGAIEILTTAQNVCSLWYKICKDPFLWRVIDMHNSGDLNSFDH-L 70

Query: 285 EKMCRHAVDRSQGQLIDINIEYF 353
           E MC+HAVDRS GQL++INIE+F
Sbjct: 71  EIMCKHAVDRSCGQLVEINIEHF 93


>ref|XP_004134905.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 277

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = +3

Query: 105 WLELPREITSAILHKLGAIEILTTAQSVCTAWQSVCRDPSMWRCIDMRNTGDLWDMPYNL 284
           WLELP E+   ILHKLGAIEILTTAQ+VC+ W  +C+DP +WR IDM N+GDL    + L
Sbjct: 12  WLELPAEVIFVILHKLGAIEILTTAQNVCSLWYKICKDPFLWRVIDMHNSGDLNSFDH-L 70

Query: 285 EKMCRHAVDRSQGQLIDINIEYF 353
           E MC+HAVDRS GQL++INIE+F
Sbjct: 71  EIMCKHAVDRSCGQLVEINIEHF 93


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