BLASTX nr result
ID: Salvia21_contig00000403
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Salvia21_contig00000403 (337 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ... 77 9e-24 gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bamb... 72 4e-23 gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undul... 70 4e-23 gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca] 70 2e-22 dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris] 70 2e-22 >ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis vinifera] gi|147833478|emb|CAN75185.1| hypothetical protein VITISV_001912 [Vitis vinifera] gi|298205231|emb|CBI17290.3| unnamed protein product [Vitis vinifera] Length = 152 Score = 76.6 bits (187), Expect(2) = 9e-24 Identities = 36/42 (85%), Positives = 40/42 (95%) Frame = +2 Query: 212 GLSYGTDDQSLKDAFSSFGEVDFARVVTDRESGRSRGFGFVN 337 GLSYGTDDQSLKDAFSSFG+V ARV+TDR++GRSRGFGFVN Sbjct: 46 GLSYGTDDQSLKDAFSSFGDVVEARVITDRDTGRSRGFGFVN 87 Score = 58.5 bits (140), Expect(2) = 9e-24 Identities = 33/52 (63%), Positives = 39/52 (75%), Gaps = 4/52 (7%) Frame = +3 Query: 15 MACFNKVGTMLRQSISASSAMTGQSS---LFNAIRCMST-KLYIGGLSYGTD 158 MA N+ G +LRQSIS +SA GQ S L N+IRCMS+ KL+IGGLSYGTD Sbjct: 1 MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTD 52 >gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii] Length = 162 Score = 71.6 bits (174), Expect(2) = 4e-23 Identities = 33/42 (78%), Positives = 40/42 (95%) Frame = +2 Query: 212 GLSYGTDDQSLKDAFSSFGEVDFARVVTDRESGRSRGFGFVN 337 GLS+GTDDQSLKDAF+SFGEV ARV+TDR++G+SRGFGFV+ Sbjct: 43 GLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVS 84 Score = 61.2 bits (147), Expect(2) = 4e-23 Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%) Frame = +3 Query: 15 MACFNKVGTMLRQSISASSAMTGQS-SLFNAIRCMSTKLYIGGLSYGTD 158 MA FNK+G++ R S ASSA TG + ++FNA R MSTKL++GGLS+GTD Sbjct: 1 MAAFNKLGSLFRHSALASSASTGSTPAMFNAARLMSTKLFVGGLSWGTD 49 >gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata] Length = 144 Score = 70.5 bits (171), Expect(2) = 4e-23 Identities = 32/42 (76%), Positives = 39/42 (92%) Frame = +2 Query: 212 GLSYGTDDQSLKDAFSSFGEVDFARVVTDRESGRSRGFGFVN 337 GLS+GTDDQSL+DAF++FG+V ARV+ DR+SGRSRGFGFVN Sbjct: 44 GLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVN 85 Score = 62.4 bits (150), Expect(2) = 4e-23 Identities = 31/50 (62%), Positives = 41/50 (82%), Gaps = 2/50 (4%) Frame = +3 Query: 15 MACFNKVGTMLRQSIS--ASSAMTGQSSLFNAIRCMSTKLYIGGLSYGTD 158 MA +NK+G +LRQSIS A SA + S+F+A+RCMSTKL++GGLS+GTD Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPMPSMFDAVRCMSTKLFVGGLSWGTD 50 >gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca] Length = 144 Score = 70.5 bits (171), Expect(2) = 2e-22 Identities = 32/42 (76%), Positives = 39/42 (92%) Frame = +2 Query: 212 GLSYGTDDQSLKDAFSSFGEVDFARVVTDRESGRSRGFGFVN 337 GLS+GTDDQSL+DAF++FG+V ARV+ DR+SGRSRGFGFVN Sbjct: 44 GLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVN 85 Score = 60.5 bits (145), Expect(2) = 2e-22 Identities = 31/50 (62%), Positives = 40/50 (80%), Gaps = 2/50 (4%) Frame = +3 Query: 15 MACFNKVGTMLRQSIS--ASSAMTGQSSLFNAIRCMSTKLYIGGLSYGTD 158 MA +NK+G +LRQSIS A SA + S+ +AIRCMSTKL++GGLS+GTD Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPMPSMLDAIRCMSTKLFVGGLSWGTD 50 >dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris] Length = 144 Score = 70.5 bits (171), Expect(2) = 2e-22 Identities = 32/42 (76%), Positives = 39/42 (92%) Frame = +2 Query: 212 GLSYGTDDQSLKDAFSSFGEVDFARVVTDRESGRSRGFGFVN 337 GLS+GTDDQSL+DAF++FG+V ARV+ DR+SGRSRGFGFVN Sbjct: 44 GLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVN 85 Score = 60.5 bits (145), Expect(2) = 2e-22 Identities = 30/50 (60%), Positives = 40/50 (80%), Gaps = 2/50 (4%) Frame = +3 Query: 15 MACFNKVGTMLRQSIS--ASSAMTGQSSLFNAIRCMSTKLYIGGLSYGTD 158 MA +NK+G +LRQSIS A SA + S+ +A+RCMSTKL++GGLS+GTD Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPMKSMLDAVRCMSTKLFVGGLSWGTD 50