BLASTX nr result

ID: Salvia21_contig00000403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00000403
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...    77   9e-24
gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bamb...    72   4e-23
gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undul...    70   4e-23
gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]     70   2e-22
dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]                           70   2e-22

>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score = 76.6 bits (187), Expect(2) = 9e-24
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +2

Query: 212 GLSYGTDDQSLKDAFSSFGEVDFARVVTDRESGRSRGFGFVN 337
           GLSYGTDDQSLKDAFSSFG+V  ARV+TDR++GRSRGFGFVN
Sbjct: 46  GLSYGTDDQSLKDAFSSFGDVVEARVITDRDTGRSRGFGFVN 87



 Score = 58.5 bits (140), Expect(2) = 9e-24
 Identities = 33/52 (63%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
 Frame = +3

Query: 15  MACFNKVGTMLRQSISASSAMTGQSS---LFNAIRCMST-KLYIGGLSYGTD 158
           MA  N+ G +LRQSIS +SA  GQ S   L N+IRCMS+ KL+IGGLSYGTD
Sbjct: 1   MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTD 52


>gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
          Length = 162

 Score = 71.6 bits (174), Expect(2) = 4e-23
 Identities = 33/42 (78%), Positives = 40/42 (95%)
 Frame = +2

Query: 212 GLSYGTDDQSLKDAFSSFGEVDFARVVTDRESGRSRGFGFVN 337
           GLS+GTDDQSLKDAF+SFGEV  ARV+TDR++G+SRGFGFV+
Sbjct: 43  GLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVS 84



 Score = 61.2 bits (147), Expect(2) = 4e-23
 Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +3

Query: 15  MACFNKVGTMLRQSISASSAMTGQS-SLFNAIRCMSTKLYIGGLSYGTD 158
           MA FNK+G++ R S  ASSA TG + ++FNA R MSTKL++GGLS+GTD
Sbjct: 1   MAAFNKLGSLFRHSALASSASTGSTPAMFNAARLMSTKLFVGGLSWGTD 49


>gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
          Length = 144

 Score = 70.5 bits (171), Expect(2) = 4e-23
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = +2

Query: 212 GLSYGTDDQSLKDAFSSFGEVDFARVVTDRESGRSRGFGFVN 337
           GLS+GTDDQSL+DAF++FG+V  ARV+ DR+SGRSRGFGFVN
Sbjct: 44  GLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVN 85



 Score = 62.4 bits (150), Expect(2) = 4e-23
 Identities = 31/50 (62%), Positives = 41/50 (82%), Gaps = 2/50 (4%)
 Frame = +3

Query: 15  MACFNKVGTMLRQSIS--ASSAMTGQSSLFNAIRCMSTKLYIGGLSYGTD 158
           MA +NK+G +LRQSIS  A SA +   S+F+A+RCMSTKL++GGLS+GTD
Sbjct: 1   MAFYNKLGGLLRQSISGNAVSATSPMPSMFDAVRCMSTKLFVGGLSWGTD 50


>gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
          Length = 144

 Score = 70.5 bits (171), Expect(2) = 2e-22
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = +2

Query: 212 GLSYGTDDQSLKDAFSSFGEVDFARVVTDRESGRSRGFGFVN 337
           GLS+GTDDQSL+DAF++FG+V  ARV+ DR+SGRSRGFGFVN
Sbjct: 44  GLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVN 85



 Score = 60.5 bits (145), Expect(2) = 2e-22
 Identities = 31/50 (62%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
 Frame = +3

Query: 15  MACFNKVGTMLRQSIS--ASSAMTGQSSLFNAIRCMSTKLYIGGLSYGTD 158
           MA +NK+G +LRQSIS  A SA +   S+ +AIRCMSTKL++GGLS+GTD
Sbjct: 1   MAFYNKLGGLLRQSISGNAVSATSPMPSMLDAIRCMSTKLFVGGLSWGTD 50


>dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
          Length = 144

 Score = 70.5 bits (171), Expect(2) = 2e-22
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = +2

Query: 212 GLSYGTDDQSLKDAFSSFGEVDFARVVTDRESGRSRGFGFVN 337
           GLS+GTDDQSL+DAF++FG+V  ARV+ DR+SGRSRGFGFVN
Sbjct: 44  GLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVN 85



 Score = 60.5 bits (145), Expect(2) = 2e-22
 Identities = 30/50 (60%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
 Frame = +3

Query: 15  MACFNKVGTMLRQSIS--ASSAMTGQSSLFNAIRCMSTKLYIGGLSYGTD 158
           MA +NK+G +LRQSIS  A SA +   S+ +A+RCMSTKL++GGLS+GTD
Sbjct: 1   MAFYNKLGGLLRQSISGNAVSATSPMKSMLDAVRCMSTKLFVGGLSWGTD 50


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