BLASTX nr result

ID: Salvia21_contig00000297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00000297
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
gb|AAF24593.1|AC007654_9 T19E23.14 [Arabidopsis thaliana]              62   5e-08
ref|NP_174420.1| F-box/kelch-repeat protein SKIP25 [Arabidopsis ...    62   5e-08
ref|XP_002891150.1| F-box family protein [Arabidopsis lyrata sub...    62   5e-08
ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
 Frame = -1

Query: 364 PPRREPRPLLQHPPTRLFRSDLRLRQAR------LIAATNDDFLPGLSQPLIYDPLSGKW 203
           PP   P  L+   P+ + R DL ++         L+AAT+  F P LS+PL+++PLSG W
Sbjct: 115 PPPDPPLHLILRHPSFISR-DLPIQSISASYRLILLAATSHSFSPALSRPLVFNPLSGSW 173

Query: 202 TIGSQLASARRWCIAGASHGAVF 134
             G  LA+ RRWC AG++HG V+
Sbjct: 174 AFGPPLATPRRWCAAGSAHGTVY 196


>gb|AAF24593.1|AC007654_9 T19E23.14 [Arabidopsis thaliana]
          Length = 446

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
 Frame = -1

Query: 364 PPRREP---RPLLQHPPTRLFRSDLRLRQAR----LIAATNDDFLPGLSQPLIYDPLSGK 206
           PP  +P   R L +HP    F   ++   A     LIA +N    P +S PLI+DP+S  
Sbjct: 165 PPPPDPPLHRILYRHPSFISFNLPIQCVSAAGKLILIAGSNQQLSPAISHPLIFDPISSS 224

Query: 205 WTIGSQLASARRWCIAGASHGAVF 134
           W+ G ++ S RRWC  GA  GA++
Sbjct: 225 WSSGPRIGSPRRWCATGACDGAIY 248


>ref|NP_174420.1| F-box/kelch-repeat protein SKIP25 [Arabidopsis thaliana]
           gi|75151119|sp|Q8GX29.1|SKI25_ARATH RecName:
           Full=F-box/kelch-repeat protein SKIP25; AltName:
           Full=SKP1-interacting partner 25
           gi|26451966|dbj|BAC43075.1| unknown protein [Arabidopsis
           thaliana] gi|28950983|gb|AAO63415.1| At1g31350
           [Arabidopsis thaliana] gi|332193224|gb|AEE31345.1|
           F-box/kelch-repeat protein SKIP25 [Arabidopsis thaliana]
          Length = 395

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
 Frame = -1

Query: 364 PPRREP---RPLLQHPPTRLFRSDLRLRQAR----LIAATNDDFLPGLSQPLIYDPLSGK 206
           PP  +P   R L +HP    F   ++   A     LIA +N    P +S PLI+DP+S  
Sbjct: 114 PPPPDPPLHRILYRHPSFISFNLPIQCVSAAGKLILIAGSNQQLSPAISHPLIFDPISSS 173

Query: 205 WTIGSQLASARRWCIAGASHGAVF 134
           W+ G ++ S RRWC  GA  GA++
Sbjct: 174 WSSGPRIGSPRRWCATGACDGAIY 197


>ref|XP_002891150.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336992|gb|EFH67409.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 385

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
 Frame = -1

Query: 364 PPRREP--RPLLQHPPTRLFRSDLRLRQAR----LIAATNDDFLPGLSQPLIYDPLSGKW 203
           PP   P  R L +HP    F   ++   A     LIA +N    P +S PLI+DP+S  W
Sbjct: 105 PPPDLPLHRILYRHPSFISFNLPIQCVSAAGKLILIAGSNQQLSPAISHPLIFDPISSSW 164

Query: 202 TIGSQLASARRWCIAGASHGAVF 134
           + G Q+ S RRWC  GA  GA++
Sbjct: 165 SSGPQIGSPRRWCATGACDGAIY 187


>ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|222872684|gb|EEF09815.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
 Frame = -1

Query: 364 PPRREPRPLLQHPPTRLFRSDLRLRQAR------LIAATNDDFLPGLSQPLIYDPLSGKW 203
           PP   P  LL   P  + R DL ++         LIAAT+ +F P LS+PL+++PLSG W
Sbjct: 117 PPPDPPLHLLLRHPCFISR-DLPIQSISACGRLILIAATSHNFSPALSRPLVFNPLSGVW 175

Query: 202 TIGSQLASARRWCIAGASHGAVF 134
             G  L + RRWC AG++   V+
Sbjct: 176 GFGPPLTTPRRWCAAGSAKDTVY 198


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