BLASTX nr result

ID: Salvia21_contig00000068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00000068
         (1619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193777.1| small nuclear ribonucleoprotein associated prot...   185   3e-44
ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arab...   185   3e-44
ref|XP_002529898.1| small nuclear ribonucleoprotein-associated p...   184   6e-44
ref|XP_002529896.1| small nuclear ribonucleoprotein-associated p...   184   6e-44
ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a...   183   1e-43

>ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|30685110|ref|NP_849414.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|79325195|ref|NP_001031682.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|238480869|ref|NP_001154258.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|5262167|emb|CAB45810.1| putative snRNP
           protein [Arabidopsis thaliana]
           gi|7268840|emb|CAB79044.1| putative snRNP protein
           [Arabidopsis thaliana] gi|28393634|gb|AAO42236.1|
           putative snRNP protein [Arabidopsis thaliana]
           gi|28827492|gb|AAO50590.1| putative snRNP protein
           [Arabidopsis thaliana] gi|222423490|dbj|BAH19715.1|
           AT4G20440 [Arabidopsis thaliana]
           gi|332658930|gb|AEE84330.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658931|gb|AEE84331.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658932|gb|AEE84332.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658933|gb|AEE84333.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana]
          Length = 257

 Score =  185 bits (469), Expect = 3e-44
 Identities = 97/149 (65%), Positives = 104/149 (69%), Gaps = 2/149 (1%)
 Frame = +1

Query: 151 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSK--EEREDRRTL 324
           LQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  EEREDRRTL
Sbjct: 10  LQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTL 69

Query: 325 GLVLLRGEEVISLTVEGPPPPDDSRLKTASATXXXXXXXXXXXXXXXXXXXLSQAQXXXX 504
           GLVLLRGEEVIS+TVEGPPPP++SR K  SA                    L QAQ    
Sbjct: 70  GLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGPLVQAQPGLS 129

Query: 505 XXXXXXXXXXXXMMQPQISRPPQISVPPM 591
                       MMQPQISRPPQ+S PP+
Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPQLSAPPI 158


>ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
           lyrata] gi|297313716|gb|EFH44139.1| hypothetical protein
           ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score =  185 bits (469), Expect = 3e-44
 Identities = 97/149 (65%), Positives = 104/149 (69%), Gaps = 2/149 (1%)
 Frame = +1

Query: 151 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSK--EEREDRRTL 324
           LQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  EEREDRRTL
Sbjct: 10  LQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTL 69

Query: 325 GLVLLRGEEVISLTVEGPPPPDDSRLKTASATXXXXXXXXXXXXXXXXXXXLSQAQXXXX 504
           GLVLLRGEEVIS+TVEGPPPP++SR K  SA                    L QAQ    
Sbjct: 70  GLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGPLVQAQPGLS 129

Query: 505 XXXXXXXXXXXXMMQPQISRPPQISVPPM 591
                       MMQPQISRPPQ+S PP+
Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPQLSAPPI 158


>ref|XP_002529898.1| small nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis] gi|223530625|gb|EEF32501.1| small
           nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis]
          Length = 275

 Score =  184 bits (467), Expect = 6e-44
 Identities = 100/153 (65%), Positives = 106/153 (69%), Gaps = 4/153 (2%)
 Frame = +1

Query: 151 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSK--EEREDRRTL 324
           LQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  EEREDRRTL
Sbjct: 10  LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 325 GLVLLRGEEVISLTVEGPPPPDDSRLKTASATXXXXXXXXXXXXXXXXXXXLSQAQXXXX 504
           GLVLLRGEEVIS+TVEGPPP ++SR K  SAT                   L QAQ    
Sbjct: 70  GLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLA 129

Query: 505 XXXXXXXXXXXXMMQPQISRP--PQISVPPMSY 597
                       MMQPQISRP  PQ+S PPMSY
Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSY 162


>ref|XP_002529896.1| small nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis] gi|223530623|gb|EEF32499.1| small
           nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis]
          Length = 275

 Score =  184 bits (467), Expect = 6e-44
 Identities = 100/153 (65%), Positives = 106/153 (69%), Gaps = 4/153 (2%)
 Frame = +1

Query: 151 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSK--EEREDRRTL 324
           LQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  EEREDRRTL
Sbjct: 10  LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 325 GLVLLRGEEVISLTVEGPPPPDDSRLKTASATXXXXXXXXXXXXXXXXXXXLSQAQXXXX 504
           GLVLLRGEEVIS+TVEGPPP ++SR K  SAT                   L QAQ    
Sbjct: 70  GLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLA 129

Query: 505 XXXXXXXXXXXXMMQPQISRP--PQISVPPMSY 597
                       MMQPQISRP  PQ+S PPMSY
Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSY 162


>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
           [Vitis vinifera] gi|147774905|emb|CAN61706.1|
           hypothetical protein VITISV_001610 [Vitis vinifera]
          Length = 276

 Score =  183 bits (465), Expect = 1e-43
 Identities = 98/152 (64%), Positives = 105/152 (69%), Gaps = 3/152 (1%)
 Frame = +1

Query: 151 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSK-EEREDRRTLG 327
           LQYINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K EERE+RRTLG
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNEEREERRTLG 69

Query: 328 LVLLRGEEVISLTVEGPPPPDDSRLKTASATXXXXXXXXXXXXXXXXXXXLSQAQXXXXX 507
           LVLLRGEEVIS+TVEGPPPP++SR K   A                    L QAQ     
Sbjct: 70  LVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAPLIQAQPGLAG 129

Query: 508 XXXXXXXXXXXMMQPQISRP--PQISVPPMSY 597
                      MMQPQISRP  PQ+S PPM+Y
Sbjct: 130 PVRGVGGPAPGMMQPQISRPPVPQLSAPPMTY 161


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