BLASTX nr result
ID: Rheum21_contig00039459
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00039459
(251 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT40486.1| putative polyprotein [Solanum demissum] 82 7e-14
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 78 1e-12
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t... 76 4e-12
ref|XP_006414770.1| hypothetical protein EUTSA_v10027425mg, part... 74 2e-11
ref|XP_006392205.1| hypothetical protein EUTSA_v10023972mg, part... 74 2e-11
ref|XP_006415896.1| hypothetical protein EUTSA_v10009346mg, part... 72 6e-11
ref|XP_006403356.1| hypothetical protein EUTSA_v10003354mg [Eutr... 70 3e-10
ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661... 68 1e-09
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 67 3e-09
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 67 3e-09
gb|AAD11595.1| putative reverse transcriptase [Arabidopsis thali... 66 4e-09
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 66 5e-09
gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsi... 65 7e-09
emb|CAN79868.1| hypothetical protein VITISV_011481 [Vitis vinifera] 65 1e-08
emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera] 65 1e-08
gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 64 2e-08
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera] 64 2e-08
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 64 2e-08
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] 64 2e-08
emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera] 64 2e-08
>gb|AAT40486.1| putative polyprotein [Solanum demissum]
Length = 1065
Score = 82.0 bits (201), Expect = 7e-14
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +2
Query: 56 SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVDLD 235
SPY+L +DH G+ I P++LKG NYEEW AMRN+FRAK KLGF DG I + + +LD
Sbjct: 6 SPYFLLSADHTGICITPVVLKGYNYEEWAKAMRNAFRAKKKLGFIDGLITQPKEEGFELD 65
Query: 236 DW 241
DW
Sbjct: 66 DW 67
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/77 (48%), Positives = 46/77 (59%)
Frame = +2
Query: 11 STMTTDKTVAAPAVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFT 190
ST TT + SPYYLH SDHP + P++L G+NYE W RN+ +AK KLGF
Sbjct: 8 STATTASSEKDAISASPYYLHPSDHPHHVLTPMLLNGENYERWAKLTRNNLQAKQKLGFI 67
Query: 191 DGTIKKLVADSVDLDDW 241
DGT+ K +DS D W
Sbjct: 68 DGTLTKPSSDSPDYPRW 84
>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 370
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +2
Query: 38 AAPAVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVA 217
A+ V SPY L +SD+PG I ++L GDNY EW M N+ +AK K GF DGTI+K +
Sbjct: 22 ASSVVQSPYTLSNSDNPGTLITSVVLNGDNYNEWSEEMLNALQAKRKTGFIDGTIQKPAS 81
Query: 218 DSVDLDDW 241
DS D ++W
Sbjct: 82 DSPDFENW 89
>ref|XP_006414770.1| hypothetical protein EUTSA_v10027425mg, partial [Eutrema
salsugineum] gi|557115940|gb|ESQ56223.1| hypothetical
protein EUTSA_v10027425mg, partial [Eutrema salsugineum]
Length = 224
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +2
Query: 32 TVAAPAVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKL 211
+ A A+ SPYYLH SD+ G + PI+L G NYE W M NS R K K+GF DGT+K+
Sbjct: 16 STTAAALVSPYYLHPSDNTGQVLTPILLNGSNYERWAKLMLNSLRTKRKIGFVDGTLKRP 75
Query: 212 VADSVDLDDW 241
+S + + W
Sbjct: 76 SDNSDEAEKW 85
>ref|XP_006392205.1| hypothetical protein EUTSA_v10023972mg, partial [Eutrema
salsugineum] gi|557088711|gb|ESQ29491.1| hypothetical
protein EUTSA_v10023972mg, partial [Eutrema salsugineum]
Length = 198
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 53 NSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVDL 232
+SPYYL SDHP + P++L GDNYE W RN+ AKHKLGF DG++ K A+S D
Sbjct: 16 SSPYYLSSSDHPHHVLTPMLLNGDNYEMWAKLARNNLVAKHKLGFIDGSLSKPSAESNDY 75
Query: 233 DDW 241
W
Sbjct: 76 QRW 78
>ref|XP_006415896.1| hypothetical protein EUTSA_v10009346mg, partial [Eutrema
salsugineum] gi|557093667|gb|ESQ34249.1| hypothetical
protein EUTSA_v10009346mg, partial [Eutrema salsugineum]
Length = 272
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +2
Query: 47 AVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSV 226
A+ SPYYLH SD+ G + PI+L G NYE W M NS R K K+GF DGT+K+ +S
Sbjct: 23 ALVSPYYLHLSDNTGQVLTPILLNGSNYERWAKLMLNSLRTKRKIGFVDGTLKRPSDNSD 82
Query: 227 DLDDW 241
+ + W
Sbjct: 83 EAEKW 87
>ref|XP_006403356.1| hypothetical protein EUTSA_v10003354mg [Eutrema salsugineum]
gi|557104469|gb|ESQ44809.1| hypothetical protein
EUTSA_v10003354mg [Eutrema salsugineum]
Length = 198
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +2
Query: 14 TMTTDKTVAAPAVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTD 193
+MTT++ + SP+YLH SD PG I + L+G+NYE+W +RN+ R K KLGF +
Sbjct: 23 SMTTNEVML-----SPFYLHPSDRPGDLITTVQLRGENYEDWAKHVRNALRTKRKLGFIE 77
Query: 194 GTIKKLVADSVDLDDW 241
GT+KK A + +L+ W
Sbjct: 78 GTVKKPTA-TKELEQW 92
>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
Length = 516
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +2
Query: 56 SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVDLD 235
SPY L+ SD+PG I + LKG+NY+EW A+R S RA+ K F DG+IKK + ++D
Sbjct: 29 SPYDLYSSDNPGNIITQVQLKGENYDEWARAVRGSLRARRKFRFVDGSIKKPDDAAPEID 88
Query: 236 DW 241
DW
Sbjct: 89 DW 90
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +2
Query: 8 LSTMTTDKTVAAPAVN--SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKL 181
+S+ T +T P V SPY L SD+PG I ++L GDNY EW M N+ +AK K
Sbjct: 7 VSSATHPRTNQQPDVTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKT 66
Query: 182 GFTDGTIKKLVADSVDLDDW 241
GF +G+I K D+ D ++W
Sbjct: 67 GFINGSISKPPLDNPDYENW 86
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +2
Query: 8 LSTMTTDKTVAAPAVN--SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKL 181
+S+ T +T P V SPY L SD+PG I ++L GDNY EW M N+ +AK K
Sbjct: 7 VSSATHPRTNQQPDVTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKT 66
Query: 182 GFTDGTIKKLVADSVDLDDW 241
GF +G+I K D+ D ++W
Sbjct: 67 GFINGSISKPPLDNPDYENW 86
>gb|AAD11595.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|4263040|gb|AAD15309.1| putative reverse transcriptase
[Arabidopsis thaliana] gi|7270676|emb|CAB77838.1|
putative reverse transcriptase [Arabidopsis thaliana]
Length = 374
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +2
Query: 53 NSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKK 208
+SPY+L SDHPGL + P +L G++Y W++AM S AK+KLGF DG+I K
Sbjct: 67 HSPYHLVSSDHPGLVLAPELLDGNSYGTWIIAMTTSIEAKNKLGFVDGSIPK 118
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = +2
Query: 53 NSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKK 208
+SPY+LH SDHPGL I IL G NY W +AMR S AK+KL F DG++ +
Sbjct: 65 HSPYFLHSSDHPGLNIVSHILDGTNYNNWSIAMRMSLDAKNKLSFVDGSLPR 116
>gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|17065314|gb|AAL32811.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|21387147|gb|AAM47977.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 411
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/67 (46%), Positives = 40/67 (59%)
Frame = +2
Query: 50 VNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVD 229
V++P LH SDHPGL+I +L G NY W +AMR S AK+KLGF DG++ + D
Sbjct: 63 VDNPLILHSSDHPGLSIVAHVLDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDST 122
Query: 230 LDDW**C 250
W C
Sbjct: 123 FRIWSRC 129
>emb|CAN79868.1| hypothetical protein VITISV_011481 [Vitis vinifera]
Length = 154
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 53 NSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKK 208
+SP YLH SD+PG TI + G+NY+ W A++N+ RAK+KLG DGT+ K
Sbjct: 15 SSPLYLHPSDNPGATITTCVFNGENYDMWEKAVKNALRAKNKLGIIDGTVNK 66
>emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera]
Length = 1171
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +2
Query: 50 VNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIK 205
+++PY+ HHSDHPGL + L GDNY W AM + AK+KLGF +GTIK
Sbjct: 38 LSNPYFTHHSDHPGLVLISKPLNGDNYSAWRKAMTLALNAKNKLGFVNGTIK 89
>gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao]
Length = 1141
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 56 SPYYLHHSDHPGLTIC--PIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVD 229
SPY+LH SDHPGL P+ G+NY W + N+ R+K+K GF DGTI K +S D
Sbjct: 29 SPYFLHSSDHPGLIFVTHPLNENGENYFTWRRSFLNALRSKNKAGFVDGTIVKPDVNSQD 88
Query: 230 LDDW**C 250
D W C
Sbjct: 89 YDSWVQC 95
>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
Length = 334
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = +2
Query: 17 MTTDKT-----VAAPAVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKL 181
M T+KT A P+ LHHSDHPG+ + +L+GDNY W AMR S AK K+
Sbjct: 1 MDTNKTGLTSSKATTEALDPFSLHHSDHPGMVLVSKVLEGDNYSTWSRAMRISLSAKDKI 60
Query: 182 GFTDGTIKKLVADSVDLDDW**C 250
GF G+IK + W C
Sbjct: 61 GFVTGSIKPPSSTDDSFPSWQRC 83
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/65 (47%), Positives = 38/65 (58%)
Frame = +2
Query: 56 SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVDLD 235
+P LH SDHPGL+I IL G NY W +AMR S AK+KLGF DG++ + D
Sbjct: 56 NPLLLHSSDHPGLSIVAHILDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDSTFR 115
Query: 236 DW**C 250
W C
Sbjct: 116 IWSRC 120
>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
Length = 1279
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = +2
Query: 56 SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGT 199
+PY+LHHSDHPG+ + L GDNY W AM S AK KLGF DGT
Sbjct: 16 NPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGT 63
>emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]
Length = 332
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = +2
Query: 56 SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGT 199
+PY+LHHSDHPG+ + L GDNY W AM S AK KLGF DGT
Sbjct: 16 NPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGT 63