BLASTX nr result

ID: Rheum21_contig00039459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00039459
         (251 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40486.1| putative polyprotein [Solanum demissum]                 82   7e-14
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...    78   1e-12
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t...    76   4e-12
ref|XP_006414770.1| hypothetical protein EUTSA_v10027425mg, part...    74   2e-11
ref|XP_006392205.1| hypothetical protein EUTSA_v10023972mg, part...    74   2e-11
ref|XP_006415896.1| hypothetical protein EUTSA_v10009346mg, part...    72   6e-11
ref|XP_006403356.1| hypothetical protein EUTSA_v10003354mg [Eutr...    70   3e-10
ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661...    68   1e-09
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    67   3e-09
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    67   3e-09
gb|AAD11595.1| putative reverse transcriptase [Arabidopsis thali...    66   4e-09
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia...    66   5e-09
gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsi...    65   7e-09
emb|CAN79868.1| hypothetical protein VITISV_011481 [Vitis vinifera]    65   1e-08
emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera]    65   1e-08
gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ...    64   2e-08
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]    64   2e-08
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]                64   2e-08
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]    64   2e-08
emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]    64   2e-08

>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = +2

Query: 56  SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVDLD 235
           SPY+L  +DH G+ I P++LKG NYEEW  AMRN+FRAK KLGF DG I +   +  +LD
Sbjct: 6   SPYFLLSADHTGICITPVVLKGYNYEEWAKAMRNAFRAKKKLGFIDGLITQPKEEGFELD 65

Query: 236 DW 241
           DW
Sbjct: 66  DW 67


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 37/77 (48%), Positives = 46/77 (59%)
 Frame = +2

Query: 11  STMTTDKTVAAPAVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFT 190
           ST TT  +       SPYYLH SDHP   + P++L G+NYE W    RN+ +AK KLGF 
Sbjct: 8   STATTASSEKDAISASPYYLHPSDHPHHVLTPMLLNGENYERWAKLTRNNLQAKQKLGFI 67

Query: 191 DGTIKKLVADSVDLDDW 241
           DGT+ K  +DS D   W
Sbjct: 68  DGTLTKPSSDSPDYPRW 84


>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 370

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 34/68 (50%), Positives = 45/68 (66%)
 Frame = +2

Query: 38  AAPAVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVA 217
           A+  V SPY L +SD+PG  I  ++L GDNY EW   M N+ +AK K GF DGTI+K  +
Sbjct: 22  ASSVVQSPYTLSNSDNPGTLITSVVLNGDNYNEWSEEMLNALQAKRKTGFIDGTIQKPAS 81

Query: 218 DSVDLDDW 241
           DS D ++W
Sbjct: 82  DSPDFENW 89


>ref|XP_006414770.1| hypothetical protein EUTSA_v10027425mg, partial [Eutrema
           salsugineum] gi|557115940|gb|ESQ56223.1| hypothetical
           protein EUTSA_v10027425mg, partial [Eutrema salsugineum]
          Length = 224

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/70 (47%), Positives = 44/70 (62%)
 Frame = +2

Query: 32  TVAAPAVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKL 211
           +  A A+ SPYYLH SD+ G  + PI+L G NYE W   M NS R K K+GF DGT+K+ 
Sbjct: 16  STTAAALVSPYYLHPSDNTGQVLTPILLNGSNYERWAKLMLNSLRTKRKIGFVDGTLKRP 75

Query: 212 VADSVDLDDW 241
             +S + + W
Sbjct: 76  SDNSDEAEKW 85


>ref|XP_006392205.1| hypothetical protein EUTSA_v10023972mg, partial [Eutrema
           salsugineum] gi|557088711|gb|ESQ29491.1| hypothetical
           protein EUTSA_v10023972mg, partial [Eutrema salsugineum]
          Length = 198

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = +2

Query: 53  NSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVDL 232
           +SPYYL  SDHP   + P++L GDNYE W    RN+  AKHKLGF DG++ K  A+S D 
Sbjct: 16  SSPYYLSSSDHPHHVLTPMLLNGDNYEMWAKLARNNLVAKHKLGFIDGSLSKPSAESNDY 75

Query: 233 DDW 241
             W
Sbjct: 76  QRW 78


>ref|XP_006415896.1| hypothetical protein EUTSA_v10009346mg, partial [Eutrema
           salsugineum] gi|557093667|gb|ESQ34249.1| hypothetical
           protein EUTSA_v10009346mg, partial [Eutrema salsugineum]
          Length = 272

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/65 (49%), Positives = 42/65 (64%)
 Frame = +2

Query: 47  AVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSV 226
           A+ SPYYLH SD+ G  + PI+L G NYE W   M NS R K K+GF DGT+K+   +S 
Sbjct: 23  ALVSPYYLHLSDNTGQVLTPILLNGSNYERWAKLMLNSLRTKRKIGFVDGTLKRPSDNSD 82

Query: 227 DLDDW 241
           + + W
Sbjct: 83  EAEKW 87


>ref|XP_006403356.1| hypothetical protein EUTSA_v10003354mg [Eutrema salsugineum]
           gi|557104469|gb|ESQ44809.1| hypothetical protein
           EUTSA_v10003354mg [Eutrema salsugineum]
          Length = 198

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/76 (44%), Positives = 50/76 (65%)
 Frame = +2

Query: 14  TMTTDKTVAAPAVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTD 193
           +MTT++ +      SP+YLH SD PG  I  + L+G+NYE+W   +RN+ R K KLGF +
Sbjct: 23  SMTTNEVML-----SPFYLHPSDRPGDLITTVQLRGENYEDWAKHVRNALRTKRKLGFIE 77

Query: 194 GTIKKLVADSVDLDDW 241
           GT+KK  A + +L+ W
Sbjct: 78  GTVKKPTA-TKELEQW 92


>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
          Length = 516

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 31/62 (50%), Positives = 42/62 (67%)
 Frame = +2

Query: 56  SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVDLD 235
           SPY L+ SD+PG  I  + LKG+NY+EW  A+R S RA+ K  F DG+IKK    + ++D
Sbjct: 29  SPYDLYSSDNPGNIITQVQLKGENYDEWARAVRGSLRARRKFRFVDGSIKKPDDAAPEID 88

Query: 236 DW 241
           DW
Sbjct: 89  DW 90


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
 Frame = +2

Query: 8   LSTMTTDKTVAAPAVN--SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKL 181
           +S+ T  +T   P V   SPY L  SD+PG  I  ++L GDNY EW   M N+ +AK K 
Sbjct: 7   VSSATHPRTNQQPDVTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKT 66

Query: 182 GFTDGTIKKLVADSVDLDDW 241
           GF +G+I K   D+ D ++W
Sbjct: 67  GFINGSISKPPLDNPDYENW 86


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
 Frame = +2

Query: 8   LSTMTTDKTVAAPAVN--SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKL 181
           +S+ T  +T   P V   SPY L  SD+PG  I  ++L GDNY EW   M N+ +AK K 
Sbjct: 7   VSSATHPRTNQQPDVTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKT 66

Query: 182 GFTDGTIKKLVADSVDLDDW 241
           GF +G+I K   D+ D ++W
Sbjct: 67  GFINGSISKPPLDNPDYENW 86


>gb|AAD11595.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|4263040|gb|AAD15309.1| putative reverse transcriptase
           [Arabidopsis thaliana] gi|7270676|emb|CAB77838.1|
           putative reverse transcriptase [Arabidopsis thaliana]
          Length = 374

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +2

Query: 53  NSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKK 208
           +SPY+L  SDHPGL + P +L G++Y  W++AM  S  AK+KLGF DG+I K
Sbjct: 67  HSPYHLVSSDHPGLVLAPELLDGNSYGTWIIAMTTSIEAKNKLGFVDGSIPK 118


>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268497|emb|CAB78748.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1433

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +2

Query: 53  NSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKK 208
           +SPY+LH SDHPGL I   IL G NY  W +AMR S  AK+KL F DG++ +
Sbjct: 65  HSPYFLHSSDHPGLNIVSHILDGTNYNNWSIAMRMSLDAKNKLSFVDGSLPR 116


>gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
           gi|17065314|gb|AAL32811.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|21387147|gb|AAM47977.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 411

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 31/67 (46%), Positives = 40/67 (59%)
 Frame = +2

Query: 50  VNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVD 229
           V++P  LH SDHPGL+I   +L G NY  W +AMR S  AK+KLGF DG++ +   D   
Sbjct: 63  VDNPLILHSSDHPGLSIVAHVLDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDST 122

Query: 230 LDDW**C 250
              W  C
Sbjct: 123 FRIWSRC 129


>emb|CAN79868.1| hypothetical protein VITISV_011481 [Vitis vinifera]
          Length = 154

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +2

Query: 53  NSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKK 208
           +SP YLH SD+PG TI   +  G+NY+ W  A++N+ RAK+KLG  DGT+ K
Sbjct: 15  SSPLYLHPSDNPGATITTCVFNGENYDMWEKAVKNALRAKNKLGIIDGTVNK 66


>emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera]
          Length = 1171

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 50  VNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIK 205
           +++PY+ HHSDHPGL +    L GDNY  W  AM  +  AK+KLGF +GTIK
Sbjct: 38  LSNPYFTHHSDHPGLVLISKPLNGDNYSAWRKAMTLALNAKNKLGFVNGTIK 89


>gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
           cacao]
          Length = 1141

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = +2

Query: 56  SPYYLHHSDHPGLTIC--PIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVD 229
           SPY+LH SDHPGL     P+   G+NY  W  +  N+ R+K+K GF DGTI K   +S D
Sbjct: 29  SPYFLHSSDHPGLIFVTHPLNENGENYFTWRRSFLNALRSKNKAGFVDGTIVKPDVNSQD 88

Query: 230 LDDW**C 250
            D W  C
Sbjct: 89  YDSWVQC 95


>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
 Frame = +2

Query: 17  MTTDKT-----VAAPAVNSPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKL 181
           M T+KT      A      P+ LHHSDHPG+ +   +L+GDNY  W  AMR S  AK K+
Sbjct: 1   MDTNKTGLTSSKATTEALDPFSLHHSDHPGMVLVSKVLEGDNYSTWSRAMRISLSAKDKI 60

Query: 182 GFTDGTIKKLVADSVDLDDW**C 250
           GF  G+IK   +       W  C
Sbjct: 61  GFVTGSIKPPSSTDDSFPSWQRC 83


>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
          Length = 1436

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/65 (47%), Positives = 38/65 (58%)
 Frame = +2

Query: 56  SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGTIKKLVADSVDLD 235
           +P  LH SDHPGL+I   IL G NY  W +AMR S  AK+KLGF DG++ +   D     
Sbjct: 56  NPLLLHSSDHPGLSIVAHILDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDSTFR 115

Query: 236 DW**C 250
            W  C
Sbjct: 116 IWSRC 120


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/48 (58%), Positives = 32/48 (66%)
 Frame = +2

Query: 56  SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGT 199
           +PY+LHHSDHPG+ +    L GDNY  W  AM  S  AK KLGF DGT
Sbjct: 16  NPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGT 63


>emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]
          Length = 332

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/48 (58%), Positives = 32/48 (66%)
 Frame = +2

Query: 56  SPYYLHHSDHPGLTICPIILKGDNYEEWVVAMRNSFRAKHKLGFTDGT 199
           +PY+LHHSDHPG+ +    L GDNY  W  AM  S  AK KLGF DGT
Sbjct: 16  NPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGT 63


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