BLASTX nr result
ID: Rheum21_contig00039393
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00039393
(268 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531691.1| pentatricopeptide repeat-containing protein,... 102 7e-20
gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis] 101 1e-19
gb|EMJ16564.1| hypothetical protein PRUPE_ppa005588mg [Prunus pe... 98 1e-18
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
emb|CBI28420.3| unnamed protein product [Vitis vinifera] 92 5e-17
ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citr... 91 2e-16
gb|EOX93464.1| Pentatricopeptide repeat superfamily protein, put... 91 2e-16
ref|XP_004295356.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 86 4e-15
ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi... 86 5e-15
ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15
ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutr... 78 1e-12
gb|EXB60277.1| hypothetical protein L484_005875 [Morus notabilis] 75 7e-12
ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays] 73 3e-11
ref|XP_004965044.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
ref|XP_004493626.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Caps... 71 1e-10
gb|EMJ28052.1| hypothetical protein PRUPE_ppa017194mg, partial [... 71 1e-10
ref|XP_003596872.1| Pentatricopeptide repeat-containing protein ... 71 1e-10
gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula] 71 1e-10
>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 434
Score = 102 bits (253), Expect = 7e-20
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Frame = -2
Query: 267 SRNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXX 88
SRNL SWN MINGYMK+GD A +LFD M EKNLI+WNSM+AGY+ N+R+
Sbjct: 232 SRNLVSWNAMINGYMKAGDFVLASELFDKMPEKNLISWNSMVAGYDLNERFKEALDLFLT 291
Query: 87 XXEIGAVPNHATLVSVFAAISGLALV--GMW 1
E PNHATLVS F+A+SGLA + G W
Sbjct: 292 MLERDFTPNHATLVSTFSAVSGLASLSTGKW 322
>gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis]
Length = 686
Score = 101 bits (251), Expect = 1e-19
Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Frame = -2
Query: 267 SRNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXX 88
SRNL SWN MINGYMKSGD AR+LFD M +++ITWNSMIAGYEFN ++
Sbjct: 244 SRNLVSWNAMINGYMKSGDVEMARRLFDEMPTRDVITWNSMIAGYEFNGKFMEALYLFIA 303
Query: 87 XXEIGAVPNHATLVSVFAAISGLALV--GMW 1
+ G VPNH T V +A+SGLA++ G W
Sbjct: 304 MLKEGLVPNHTTFVGALSAVSGLAVLSKGKW 334
>gb|EMJ16564.1| hypothetical protein PRUPE_ppa005588mg [Prunus persica]
Length = 453
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/91 (54%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Frame = -2
Query: 267 SRNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXX 88
+RNL SWN MINGYMKSGD AR+LF LM +++ITWNSMIAGYEFN ++
Sbjct: 11 NRNLVSWNAMINGYMKSGDFEMARQLFGLMPTRDIITWNSMIAGYEFNGQFMEALELFQE 70
Query: 87 XXEIGAVPNHATLVSVFAAISGLALV--GMW 1
E +P+HATLVS +A+SGLA + G W
Sbjct: 71 ILEEDIMPSHATLVSALSAVSGLATLSKGRW 101
>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 94.4 bits (233), Expect = 1e-17
Identities = 47/86 (54%), Positives = 60/86 (69%)
Frame = -2
Query: 264 RNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXXX 85
RNL SWN MINGYMKSGD SA +LF M +L+TWN MIAGYE N ++
Sbjct: 238 RNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMM 297
Query: 84 XEIGAVPNHATLVSVFAAISGLALVG 7
++G+ P+HATLVSV +A+SGLA++G
Sbjct: 298 LKLGSRPSHATLVSVLSAVSGLAVLG 323
>emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 92.4 bits (228), Expect = 5e-17
Identities = 46/85 (54%), Positives = 59/85 (69%)
Frame = -2
Query: 261 NLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXXXX 82
NL SWN MINGYMKSGD SA +LF M +L+TWN MIAGYE N ++
Sbjct: 191 NLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMML 250
Query: 81 EIGAVPNHATLVSVFAAISGLALVG 7
++G+ P+HATLVSV +A+SGLA++G
Sbjct: 251 KLGSRPSHATLVSVLSAVSGLAVLG 275
>ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citrus clementina]
gi|568830445|ref|XP_006469509.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Citrus sinensis]
gi|557550368|gb|ESR60997.1| hypothetical protein
CICLE_v10014482mg [Citrus clementina]
Length = 689
Score = 90.9 bits (224), Expect = 2e-16
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Frame = -2
Query: 267 SRNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXX 88
+RNL SWN MINGYMK+GD SA +LF+ M ++LITWNSMIAGYE N R+
Sbjct: 247 NRNLVSWNAMINGYMKAGDVDSACELFNDMEIRDLITWNSMIAGYELNGRFMEALEFFET 306
Query: 87 XXEIGAVPNHATLVSVFAAISGLALV--GMW 1
+PN ATLVS +A++GLA++ G W
Sbjct: 307 MLRGDVLPNDATLVSALSAVAGLAVLNKGRW 337
>gb|EOX93464.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 682
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/87 (52%), Positives = 58/87 (66%)
Frame = -2
Query: 267 SRNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXX 88
+RNL SWN MINGYMK+GD SA KLF+ M ++NLITWNS+I G E N +
Sbjct: 240 NRNLVSWNTMINGYMKAGDINSACKLFNRMPKRNLITWNSIIGGLELNLHFVEALEMFKR 299
Query: 87 XXEIGAVPNHATLVSVFAAISGLALVG 7
+ P+HATLVSV +A+SGLA +G
Sbjct: 300 MLKEEFRPSHATLVSVISAVSGLASLG 326
>ref|XP_004295356.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62890-like [Fragaria vesca subsp. vesca]
Length = 488
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -2
Query: 267 SRNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXX 88
S+N+ SWN MINGYMK G+ AR+LF M +++I+WNSMIAGYEFN R+
Sbjct: 148 SKNVVSWNAMINGYMKGGEFEKARELFGQMGSRDVISWNSMIAGYEFNGRFGEALELFRE 207
Query: 87 XXEIGAVPNHATLVSVFAAISGLA 16
E P ATLVSV +A+SGLA
Sbjct: 208 VLEEDVRPTPATLVSVLSAVSGLA 231
>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/86 (45%), Positives = 55/86 (63%)
Frame = -2
Query: 264 RNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXXX 85
RN SWN MINGYMK+GDS +A++LFD M E++L+TWNSMI GYE N+++
Sbjct: 240 RNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVM 299
Query: 84 XEIGAVPNHATLVSVFAAISGLALVG 7
PN+ T++ +A SG+ +G
Sbjct: 300 LREDISPNYTTILGAVSAASGMVSLG 325
>ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 821
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = -2
Query: 267 SRNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXX 88
S+N+ SWN MINGYMK G+ AR+LF M +++I+WNSMI+GYEFN R+
Sbjct: 379 SKNVVSWNAMINGYMKGGEFEKARELFGRMGSRDVISWNSMISGYEFNGRFGEALELFRE 438
Query: 87 XXEIGAVPNHATLVSVFAAISGLA 16
E P ATLVSV +A+SGLA
Sbjct: 439 VLEEDVRPTPATLVSVLSAVSGLA 462
>ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutrema salsugineum]
gi|557096454|gb|ESQ36962.1| hypothetical protein
EUTSA_v10002407mg [Eutrema salsugineum]
Length = 784
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Frame = -2
Query: 267 SRNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYE----FNQRYXXXXX 100
++NL SWN MINGYM+SGD SA +LF+ M E+NLITWNS+IAGYE F +
Sbjct: 340 TKNLVSWNAMINGYMRSGDFESACELFNTMPERNLITWNSIIAGYEVYGRFEEALSMFLR 399
Query: 99 XXXXXXEIGAVPNHATLVSVFAAISGLALV--GMW 1
+ PN+AT S+ +A++ A++ G W
Sbjct: 400 MLQEEEDDFIKPNNATFTSLISAVAASAILSTGKW 434
>gb|EXB60277.1| hypothetical protein L484_005875 [Morus notabilis]
Length = 720
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Frame = -2
Query: 264 RNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXXX 85
RNL SW+ M++GY K+G AR+LFD M E+N+ +WN+MIAGY N +Y
Sbjct: 280 RNLVSWSTMVSGYAKAGHLEEARRLFDEMPERNVGSWNAMIAGYAQNMKYAEAIELFRRM 339
Query: 84 XEI-GAVPNHATLVSVFAAISGLAL--VGMW 1
+ G VPN TLVSV +A + L +G W
Sbjct: 340 QGVEGLVPNEITLVSVLSACAHLGALDLGRW 370
>ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = -2
Query: 264 RNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFN-QRYXXXXXXXXX 88
R++ SW ++NGY K+GD GSARKLFD M E+N+++WN+MIAGY N Q
Sbjct: 317 RDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNM 376
Query: 87 XXEIGAVPNHATLVSVFAAISGLALVGM 4
+G VP TLV V +A L + M
Sbjct: 377 VDVVGLVPTEDTLVCVLSASGQLGCLEM 404
>gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
Length = 683
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = -2
Query: 252 SWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXXXXEIG 73
+WN+MI G+ + GD AR FD M E++ ITWN+MI+GYE N+ Y E+G
Sbjct: 339 TWNLMIRGFTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEVG 398
Query: 72 AVPNHATLVSVFAAISGLALV 10
P+H TL SV AA + LA++
Sbjct: 399 ERPDHHTLSSVLAACASLAML 419
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -2
Query: 264 RNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGY 133
RN+ SWN M+ Y+++GD SAR LFD M K+L++WN+MIAGY
Sbjct: 273 RNVVSWNSMMMCYIRTGDVCSARALFDEMPHKDLVSWNTMIAGY 316
>ref|XP_004965044.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Setaria italica]
Length = 682
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = -2
Query: 252 SWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXXXXEIG 73
+WN+M+ G+ + GD AR FD+M E++ ITWN+MI+GYE N+ Y E G
Sbjct: 338 TWNLMMRGFTQKGDVEHARGFFDVMPERSTITWNTMISGYEQNKDYDGTIKLFQRMLEAG 397
Query: 72 AVPNHATLVSVFAAISGLA 16
PNH TL SV AA + LA
Sbjct: 398 ERPNHHTLSSVLAACASLA 416
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -2
Query: 264 RNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGY 133
RN+ SWN M+ Y+++GD SAR LFD M K+L++WN+MIAGY
Sbjct: 272 RNVVSWNSMMMCYIRTGDVCSARALFDEMPGKDLVSWNTMIAGY 315
>ref|XP_004493626.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cicer arietinum]
Length = 666
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = -2
Query: 267 SRNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXX 88
+R++ SW M+NGY K GD SAR+ FD +KN+++WN+MIAGY N +
Sbjct: 311 TRDVYSWTCMVNGYAKCGDLESARRFFDQTPQKNVVSWNAMIAGYSQNNKPEESLKLFHE 370
Query: 87 XXEIGAVPNHATLVSVFAAISGLAL--VGMW 1
G VP+ TLVSV +A L +G W
Sbjct: 371 MVGGGLVPDEHTLVSVLSACGQLTCLNLGYW 401
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/86 (38%), Positives = 47/86 (54%)
Frame = -2
Query: 267 SRNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXX 88
S ++T NVM++ Y K G +A ++F M E+NLI+WNSMIAGY N R
Sbjct: 413 SLSVTLANVMVDMYAKCGSIDAAAEVFSTMPERNLISWNSMIAGYAANGRAKQAINVFDQ 472
Query: 87 XXEIGAVPNHATLVSVFAAISGLALV 10
+G P++ T VS+ A S L+
Sbjct: 473 MRNVGFKPDNITFVSLLTACSHGGLI 498
>ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Capsella rubella]
gi|482575903|gb|EOA40090.1| hypothetical protein
CARUB_v10008784mg [Capsella rubella]
Length = 543
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = -2
Query: 264 RNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXXX 85
+NL +WN MI+GY + GD SAR+LFD+M E+N+++WNSMIAGY N +
Sbjct: 331 KNLVTWNAMISGYTRIGDLTSARQLFDIMPERNIVSWNSMIAGYAHNGQPALAIEFFEEM 390
Query: 84 XEIG-AVPNHATLVSVFAA 31
+ G + P+ T++SV +A
Sbjct: 391 IDYGDSKPDEVTMISVLSA 409
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/79 (39%), Positives = 43/79 (54%)
Frame = -2
Query: 261 NLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXXXX 82
++ SW VMI G+ K D +ARK FDLM EK++++WN+M++GY N
Sbjct: 199 DVVSWTVMITGFAKLKDLENARKYFDLMPEKSVVSWNAMLSGYAQNGFTEETIRLFNDML 258
Query: 81 EIGAVPNHATLVSVFAAIS 25
G PN T V V +A S
Sbjct: 259 RFGVKPNETTWVIVISACS 277
>gb|EMJ28052.1| hypothetical protein PRUPE_ppa017194mg, partial [Prunus persica]
Length = 584
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/87 (37%), Positives = 53/87 (60%)
Frame = -2
Query: 267 SRNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXX 88
++N+ SW +M++GY+KSGD SAR LFD M EKNL++W+++I GY N
Sbjct: 234 NKNVASWTIMMDGYIKSGDVNSARSLFDQMPEKNLVSWSTIIGGYARNGEPRSALKMYKH 293
Query: 87 XXEIGAVPNHATLVSVFAAISGLALVG 7
E+G P+ ++ + +A S L ++G
Sbjct: 294 FKELGVRPDATFILGIISACSQLGILG 320
>ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 517
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = -2
Query: 264 RNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXXX 85
RNL SWN MI+GYMK+GD A KLFD + KN+++W +I G+ + Y
Sbjct: 155 RNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREM 214
Query: 84 XEIGAVPNHATLVSVFAAISGLALVGM 4
G VP+ T++++ +A + L +G+
Sbjct: 215 QLAGVVPDFVTVIAIISACANLGALGL 241
>gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 497
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = -2
Query: 264 RNLTSWNVMINGYMKSGDSGSARKLFDLMTEKNLITWNSMIAGYEFNQRYXXXXXXXXXX 85
RNL SWN MI+GYMK+GD A KLFD + KN+++W +I G+ + Y
Sbjct: 155 RNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREM 214
Query: 84 XEIGAVPNHATLVSVFAAISGLALVGM 4
G VP+ T++++ +A + L +G+
Sbjct: 215 QLAGVVPDFVTVIAIISACANLGALGL 241