BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00039357
         (223 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624...    99   7e-19
gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptas...    95   1e-17
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]              92   5e-17
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]              92   5e-17
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]    91   2e-16
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    90   3e-16
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    90   3e-16
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]    89   8e-16
gb|ABD32741.1| hypothetical protein MtrDRAFT_AC150777g16v1 [Medi...    88   1e-15
gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-...    88   1e-15
gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-...    88   1e-15
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...    88   1e-15
gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japoni...    88   1e-15
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]         88   1e-15
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]         87   2e-15
ref|XP_006575997.1| PREDICTED: uncharacterized protein LOC100809...    87   2e-15
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]         86   4e-15
gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thali...    86   4e-15
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664...    86   5e-15
gb|ABA97782.2| retrotransposon protein, putative, Ty3-gypsy subc...    86   5e-15

>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
          Length = 1083

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 42/73 (57%), Positives = 57/73 (78%)
 Frame = +3

Query: 3   VSQQCLISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRV 182
           V++Q L+SFSIG+Y D VLCDV+ M A HILLG PWQ+DRRV HDGYLN Y F  + +++
Sbjct: 289 VNKQVLVSFSIGRYKDDVLCDVVPMHAGHILLGRPWQYDRRVTHDGYLNRYSFVINKRKI 348

Query: 183 TLHPMSPHEILQD 221
           TL P++P ++ +D
Sbjct: 349 TLVPLTPRQVYED 361


>gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 386

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 41/73 (56%), Positives = 54/73 (73%)
 Frame = +3

Query: 3   VSQQCLISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRV 182
           V +Q L++FSIG+Y D +LCDV+ M+A HILLG PWQFDR V HDG  NT+ F +   ++
Sbjct: 13  VDKQVLVNFSIGKYNDEILCDVVPMEAGHILLGRPWQFDRNVFHDGKANTFTFVHKKHKI 72

Query: 183 TLHPMSPHEILQD 221
           +L P+SP EI QD
Sbjct: 73  SLLPLSPKEICQD 85


>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 39/73 (53%), Positives = 54/73 (73%)
 Frame = +3

Query: 3   VSQQCLISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRV 182
           V++Q  I F IG+Y D VLCDV+ M+A+H+LLG PWQFDR+  HDGY N Y F YH +++
Sbjct: 422 VNKQVEICFKIGKYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQKI 481

Query: 183 TLHPMSPHEILQD 221
            L P++P E+ +D
Sbjct: 482 NLVPLNPSEVRED 494


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 39/73 (53%), Positives = 54/73 (73%)
 Frame = +3

Query: 3   VSQQCLISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRV 182
           V++Q  I F IG+Y D VLCDV+ M+A+H+LLG PWQFDR+  HDGY N Y F YH +++
Sbjct: 422 VNKQVEICFKIGKYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQKI 481

Query: 183 TLHPMSPHEILQD 221
            L P++P E+ +D
Sbjct: 482 NLVPLNPSEVRED 494


>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
          Length = 1323

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 40/73 (54%), Positives = 53/73 (72%)
 Frame = +3

Query: 3   VSQQCLISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRV 182
           V++Q L+SFSIG+Y D VLCD++ M A HILLG PWQFDR+V HDG+ N Y F    K +
Sbjct: 450 VNKQVLVSFSIGRYKDEVLCDIVPMHAGHILLGRPWQFDRKVNHDGFKNRYSFXKDNKTI 509

Query: 183 TLHPMSPHEILQD 221
           TL P++P +  +D
Sbjct: 510 TLVPLTPRQEYED 522


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 36/73 (49%), Positives = 53/73 (72%)
 Frame = +3

Query: 3   VSQQCLISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRV 182
           V++QC+ISF++G+Y D +LCDV+ M A H+LLG PWQ+DR   H G  N Y   ++GK+ 
Sbjct: 479 VNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRYSLLHNGKKY 538

Query: 183 TLHPMSPHEILQD 221
           TL P+SP ++ +D
Sbjct: 539 TLAPLSPSQVFED 551


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 36/73 (49%), Positives = 53/73 (72%)
 Frame = +3

Query: 3   VSQQCLISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRV 182
           V++QC+ISF++G+Y D +LCDV+ M A H+LLG PWQ+DR   H G  N Y   ++GK+ 
Sbjct: 479 VNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRYSLLHNGKKY 538

Query: 183 TLHPMSPHEILQD 221
           TL P+SP ++ +D
Sbjct: 539 TLAPLSPSQVFED 551


>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
          Length = 818

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 38/69 (55%), Positives = 52/69 (75%)
 Frame = +3

Query: 3   VSQQCLISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRV 182
           V+++ L+SFSIG+Y D VLCD++ M A HILLG PWQFDR+V HDG+ N Y F  + K +
Sbjct: 472 VNKEVLVSFSIGRYKDEVLCDIVPMHAGHILLGRPWQFDRKVNHDGFKNRYSFIKNNKTI 531

Query: 183 TLHPMSPHE 209
           TL P++P +
Sbjct: 532 TLVPLTPRQ 540


>gb|ABD32741.1| hypothetical protein MtrDRAFT_AC150777g16v1 [Medicago truncatula]
          Length = 187

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 40/69 (57%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3   VSQQCLISFSIGQ-YCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKR 179
           VS+ CL+SFSIGQ Y D+V CDVI+MDA H+LLG PWQ+DR  L+DG+ NTY F  +G +
Sbjct: 29  VSKCCLVSFSIGQKYKDNVWCDVISMDACHMLLGRPWQYDRHALYDGHANTYTFVKYGVK 88

Query: 180 VTLHPMSPH 206
           + L P+ P+
Sbjct: 89  IKLVPLPPN 97


>gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550404|gb|ABA93201.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1297

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/67 (58%), Positives = 48/67 (71%)
 Frame = +3

Query: 21  ISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRVTLHPMS 200
           I+F+IG Y D V CDV+ M A +ILLG PWQFDR  +H G  N Y F YH K++ LHPMS
Sbjct: 483 INFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 542

Query: 201 PHEILQD 221
           P +IL+D
Sbjct: 543 PEDILRD 549


>gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group]
          Length = 1238

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/67 (58%), Positives = 48/67 (71%)
 Frame = +3

Query: 21  ISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRVTLHPMS 200
           I+F+IG Y D V CDV+ M A +ILLG PWQFDR  +H G  N Y F YH K++ LHPMS
Sbjct: 461 INFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 520

Query: 201 PHEILQD 221
           P +IL+D
Sbjct: 521 PEDILRD 527


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/67 (58%), Positives = 48/67 (71%)
 Frame = +3

Query: 21  ISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRVTLHPMS 200
           I+F+IG Y D V CDV+ M A +ILLG PWQFDR  +H G  N Y F YH K++ LHPMS
Sbjct: 521 INFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 580

Query: 201 PHEILQD 221
           P +IL+D
Sbjct: 581 PEDILRD 587


>gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1234

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/67 (58%), Positives = 48/67 (71%)
 Frame = +3

Query: 21  ISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRVTLHPMS 200
           I+F+IG Y D V CDV+ M A +ILLG PWQFDR  +H G  N Y F YH K++ LHPMS
Sbjct: 487 INFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 546

Query: 201 PHEILQD 221
           P +IL+D
Sbjct: 547 PEDILRD 553


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/67 (58%), Positives = 48/67 (71%)
 Frame = +3

Query: 21  ISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRVTLHPMS 200
           I+F+IG Y D V CDV+ M A +ILLG PWQFDR  +H G  N Y F YH K++ LHPMS
Sbjct: 636 INFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 695

Query: 201 PHEILQD 221
           P +IL+D
Sbjct: 696 PEDILRD 702


>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
          Length = 1431

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 39/67 (58%), Positives = 48/67 (71%)
 Frame = +3

Query: 21  ISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRVTLHPMS 200
           I+F+IG Y D V CDV+ M A +ILLG PWQFDR  +H G  N Y F YH K++ LHPMS
Sbjct: 542 INFAIGNYHDVVECDVLPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 601

Query: 201 PHEILQD 221
           P +IL+D
Sbjct: 602 PEDILRD 608


>ref|XP_006575997.1| PREDICTED: uncharacterized protein LOC100809438 [Glycine max]
          Length = 527

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 36/73 (49%), Positives = 55/73 (75%)
 Frame = +3

Query: 3   VSQQCLISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRV 182
           V +Q LI FSIG+Y D ++ DV+ M+A+H+LLG PWQ+DR V+H+G  N + F + G++V
Sbjct: 415 VDRQVLIYFSIGKYVDEIMFDVVPMEASHLLLGRPWQYDRDVVHNGVTNKFSFVHKGQKV 474

Query: 183 TLHPMSPHEILQD 221
           TL P+SP E+ ++
Sbjct: 475 TLKPLSPSEVKEE 487


>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
          Length = 2388

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 38/67 (56%), Positives = 47/67 (70%)
 Frame = +3

Query: 21  ISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRVTLHPMS 200
           I+F+IG Y D V CDV+ M   +ILLG PWQFDR  +H G  N Y F YH K++ LHPMS
Sbjct: 433 INFAIGNYHDVVECDVVPMQVCNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 492

Query: 201 PHEILQD 221
           P +IL+D
Sbjct: 493 PEDILRD 499


>gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thaliana]
           gi|7267450|emb|CAB81146.1| putative polyprotein
           [Arabidopsis thaliana]
          Length = 1054

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 36/73 (49%), Positives = 52/73 (71%)
 Frame = +3

Query: 3   VSQQCLISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRV 182
           V +Q  +  SIG+Y D ++CD++ MDA+HILLG PWQ DR+VL DG+ N   F ++G++ 
Sbjct: 416 VKEQVKVPLSIGKYHDEIMCDILHMDASHILLGRPWQSDRKVLQDGFTNRQTFEHNGRKT 475

Query: 183 TLHPMSPHEILQD 221
           TL PM+ HE+  D
Sbjct: 476 TLIPMTLHEVYLD 488


>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
          Length = 1176

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 35/73 (47%), Positives = 51/73 (69%)
 Frame = +3

Query: 3   VSQQCLISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRV 182
           V+QQ  +  +IG+Y D VLCDV+ M+ATH+LLG PWQ+D + +HDG+ N   F    K++
Sbjct: 444 VTQQVEVCLTIGRYNDKVLCDVVPMEATHVLLGRPWQYDTKAVHDGFTNKISFQQADKKI 503

Query: 183 TLHPMSPHEILQD 221
            L P+SP E+ +D
Sbjct: 504 VLKPLSPQEVCED 516


>gb|ABA97782.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1048

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 37/67 (55%), Positives = 48/67 (71%)
 Frame = +3

Query: 21  ISFSIGQYCDSVLCDVIAMDATHILLGSPWQFDRRVLHDGYLNTYVFTYHGKRVTLHPMS 200
           I+F++G Y D V CDV+ M A +ILLG PWQFDR  +H G  N Y F YH +++ LHP+S
Sbjct: 462 INFALGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHARKIVLHPIS 521

Query: 201 PHEILQD 221
           P EIL+D
Sbjct: 522 PEEILRD 528