BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00039324
         (274 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40538.2| Integrase core domain containing protein [Solanum...    88   1e-15
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...    88   1e-15
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259...    87   2e-15
ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243...    87   2e-15
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]    85   9e-15
ref|XP_004252430.1| PREDICTED: uncharacterized protein LOC101255...    84   2e-14
ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255...    84   3e-14
gb|AAT40486.1| putative polyprotein [Solanum demissum]                 83   3e-14
ref|XP_004234454.1| PREDICTED: uncharacterized protein LOC101244...    83   4e-14
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab...    83   4e-14
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    83   4e-14
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    82   6e-14
ref|XP_004235091.1| PREDICTED: uncharacterized protein LOC101246...    82   7e-14
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248...    82   1e-13
gb|ABI34329.1| Integrase core domain containing protein [Solanum...    82   1e-13
ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245...    81   1e-13
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    80   2e-13
gb|ACB45081.1| putative polyprotein [Solanum habrochaites]             79   5e-13
gb|AFN88207.1| integrase core domain containing protein [Phaseol...    79   8e-13
gb|ABI34342.1| Polyprotein, putative [Solanum demissum]                79   8e-13

>gb|AAT40538.2| Integrase core domain containing protein [Solanum demissum]
          Length = 635

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/73 (56%), Positives = 51/73 (69%)
 Frame = -3

Query: 221 GIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPTI 42
           GI+HQ TCAYTPQQNGV ERK+RH             +P+ F G  VLT+ Y+INR P+I
Sbjct: 195 GIVHQKTCAYTPQQNGVAERKHRHLLELARALKFQGHIPITFWGHCVLTSAYIINRLPSI 254

Query: 41  VLQGKPPFEVLFS 3
           VLQGK P+E+LF+
Sbjct: 255 VLQGKSPYEMLFN 267


>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 47/89 (52%), Positives = 55/89 (61%)
 Frame = -3

Query: 272 AYEXXXXXXXXXXXXSKGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF* 93
           AYE            S GIIHQTTC  TPQQNGV+ERK+RH             LP +F 
Sbjct: 141 AYELGSGVIPSEFLASLGIIHQTTCVGTPQQNGVVERKHRHLLETCRALLYQSHLPKKFW 200

Query: 92  GDSVLTATYLINRYPTIVLQGKPPFEVLF 6
           GD +LTATYLINR+P+ VL GK P++VLF
Sbjct: 201 GDCLLTATYLINRFPSKVLNGKCPYQVLF 229


>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
           lycopersicum]
          Length = 986

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/73 (56%), Positives = 53/73 (72%)
 Frame = -3

Query: 224 KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
           KGIIHQ +C YTPQQNGV+ERK+++             LP+R+ G+ VLTATYLINR PT
Sbjct: 742 KGIIHQKSCPYTPQQNGVVERKHKYLLETARALLFQSKLPMRYWGECVLTATYLINRLPT 801

Query: 44  IVLQGKPPFEVLF 6
            +LQGK P+E+L+
Sbjct: 802 KLLQGKSPYELLY 814


>ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum
           lycopersicum]
          Length = 957

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/73 (56%), Positives = 52/73 (71%)
 Frame = -3

Query: 224 KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
           KGIIHQ TC YTPQQNGV+ERK+++             LPLR+ G+ VLTATY+INR PT
Sbjct: 741 KGIIHQKTCPYTPQQNGVVERKHKYLLETARSLLFQSKLPLRYWGECVLTATYIINRLPT 800

Query: 44  IVLQGKPPFEVLF 6
            +LQ K P+E+L+
Sbjct: 801 KLLQNKSPYEILY 813


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 42/73 (57%), Positives = 50/73 (68%)
 Frame = -3

Query: 224 KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
           +GI+HQT+C  TPQQNGV+ERK+RH             LP  F GD++LTA YLINR PT
Sbjct: 668 RGILHQTSCINTPQQNGVVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPT 727

Query: 44  IVLQGKPPFEVLF 6
            +LQGK PFE LF
Sbjct: 728 PLLQGKTPFEKLF 740


>ref|XP_004252430.1| PREDICTED: uncharacterized protein LOC101255865 [Solanum
           lycopersicum]
          Length = 506

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 37/72 (51%), Positives = 50/72 (69%)
 Frame = -3

Query: 221 GIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPTI 42
           GI+HQ++C YTPQQNGV+ERK+RH             +P RF G  VLT+ YLINR PT+
Sbjct: 296 GIVHQSSCPYTPQQNGVVERKHRHILEIGRSLKIQSQIPSRFLGTCVLTSVYLINRLPTV 355

Query: 41  VLQGKPPFEVLF 6
           +L GK P+E+++
Sbjct: 356 LLNGKSPYEMMY 367


>ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum
           lycopersicum]
          Length = 1125

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/73 (54%), Positives = 50/73 (68%)
 Frame = -3

Query: 224 KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
           KGIIHQ TC YTPQQNGV+ERK+++             LPLR+ G+ VLTA Y+INR PT
Sbjct: 748 KGIIHQKTCPYTPQQNGVVERKHKYLLETARALLFQSKLPLRYWGECVLTAIYIINRLPT 807

Query: 44  IVLQGKPPFEVLF 6
            +LQ K P+E L+
Sbjct: 808 KLLQNKSPYETLY 820


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/73 (54%), Positives = 49/73 (67%)
 Frame = -3

Query: 224 KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
           +GI+HQTTC  TPQQNG +ERK+RH             LP+ F G+ VL A YLINR PT
Sbjct: 482 QGIVHQTTCVDTPQQNGRVERKHRHILNVTRALRFQANLPISFWGEYVLPAVYLINRTPT 541

Query: 44  IVLQGKPPFEVLF 6
           ++L GK P+EVLF
Sbjct: 542 LILNGKTPYEVLF 554


>ref|XP_004234454.1| PREDICTED: uncharacterized protein LOC101244259 [Solanum
           lycopersicum]
          Length = 1812

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 39/73 (53%), Positives = 48/73 (65%)
 Frame = -3

Query: 221 GIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPTI 42
           GI+H  TCAYTPQQNGV ERK+RH             +PL+F G  +LTA Y+INR P+ 
Sbjct: 647 GIVHYRTCAYTPQQNGVAERKHRHLLEVARALRFQSGVPLKFWGHCILTAVYIINRLPSK 706

Query: 41  VLQGKPPFEVLFS 3
           VL GK P+EV F+
Sbjct: 707 VLAGKSPYEVFFN 719


>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1404

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 43/72 (59%), Positives = 47/72 (65%)
 Frame = -3

Query: 224 KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
           +GIIHQT+C YTPQQNGV ERK RH             +P RF GD+VLTA YLINR PT
Sbjct: 595 RGIIHQTSCPYTPQQNGVAERKNRHLMEVARSMMFHTSVPKRFWGDAVLTACYLINRTPT 654

Query: 44  IVLQGKPPFEVL 9
            VL    PFEVL
Sbjct: 655 KVLSDLSPFEVL 666


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 39/72 (54%), Positives = 52/72 (72%)
 Frame = -3

Query: 221 GIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPTI 42
           GI+HQT+C  TPQQNG +ERK+RH             LP++F G+S+LTAT+LINR P+ 
Sbjct: 642 GILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSA 701

Query: 41  VLQGKPPFEVLF 6
           VL+GK P+E+LF
Sbjct: 702 VLKGKTPYELLF 713


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 41/74 (55%), Positives = 49/74 (66%)
 Frame = -3

Query: 224  KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
            KGI  QT+C YTPQQNGV+ERK+RH             +PL F G+ VLTA YLINR PT
Sbjct: 908  KGIELQTSCIYTPQQNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLINRIPT 967

Query: 44   IVLQGKPPFEVLFS 3
             +L  K PFEVL++
Sbjct: 968  PLLSNKSPFEVLYN 981


>ref|XP_004235091.1| PREDICTED: uncharacterized protein LOC101246227 [Solanum
           lycopersicum]
          Length = 814

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 36/72 (50%), Positives = 50/72 (69%)
 Frame = -3

Query: 221 GIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPTI 42
           GI+H+++C +TPQQNGV+ERK+RH             +P++F G+ VL A YLINR PT 
Sbjct: 703 GIVHESSCPHTPQQNGVVERKHRHILEVARALRFQGSIPIKFWGECVLAAVYLINRMPTS 762

Query: 41  VLQGKPPFEVLF 6
           VLQG+ P+EV +
Sbjct: 763 VLQGRSPYEVFY 774


>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
           lycopersicum]
          Length = 729

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 38/73 (52%), Positives = 51/73 (69%)
 Frame = -3

Query: 224 KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
           KGIIHQ +C YTPQQNGV+E K+++             +P+R+ G+ VLTATYLINR PT
Sbjct: 399 KGIIHQKSCPYTPQQNGVVEMKHKYLLETARALLFQSKIPVRYWGEYVLTATYLINRLPT 458

Query: 44  IVLQGKPPFEVLF 6
            +L GK P+E+L+
Sbjct: 459 KLLPGKSPYELLY 471


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 40/73 (54%), Positives = 48/73 (65%)
 Frame = -3

Query: 224 KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
           +GIIHQTTC YTPQQNGV ERK RH             +PLRF GD+VLT+ YLINR P+
Sbjct: 626 QGIIHQTTCPYTPQQNGVAERKNRHLIETARTLLLESNVPLRFWGDAVLTSCYLINRMPS 685

Query: 44  IVLQGKPPFEVLF 6
             +Q + P  +LF
Sbjct: 686 SSIQNQVPHSILF 698


>ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245809 [Solanum
           lycopersicum]
          Length = 1094

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 37/73 (50%), Positives = 50/73 (68%)
 Frame = -3

Query: 224 KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
           KGI+HQ TC YTPQQNGV+ERK++H             LP+++ G+ +L ATY+INR P+
Sbjct: 672 KGIVHQKTCPYTPQQNGVVERKHKHLLETARALLFQSKLPVKYWGECILCATYIINRLPS 731

Query: 44  IVLQGKPPFEVLF 6
            VL  K P+EVL+
Sbjct: 732 TVLNQKCPYEVLY 744


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 38/71 (53%), Positives = 49/71 (69%)
 Frame = -3

Query: 221 GIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPTI 42
           GIIHQT+C  TPQQNG +ERK+RH             LP++F G+S+LTA YLINR P+ 
Sbjct: 669 GIIHQTSCVGTPQQNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSS 728

Query: 41  VLQGKPPFEVL 9
           +L G+ P+EVL
Sbjct: 729 ILSGRTPYEVL 739


>gb|ACB45081.1| putative polyprotein [Solanum habrochaites]
          Length = 559

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/73 (47%), Positives = 49/73 (67%)
 Frame = -3

Query: 224 KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
           +GIIHQ++C YTPQQNGV+ERK+RH             +P++F G+  L A ++INR P+
Sbjct: 59  QGIIHQSSCPYTPQQNGVVERKHRHIMETARAIRFQGNIPIKFWGECALAAVHIINRIPS 118

Query: 44  IVLQGKPPFEVLF 6
            VL  K PFE++F
Sbjct: 119 TVLLNKSPFEIMF 131


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 39/72 (54%), Positives = 46/72 (63%)
 Frame = -3

Query: 221 GIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPTI 42
           GI+HQT+CAYTPQQNGV ERK RH             +P  F GD+VL+A YLINR P+ 
Sbjct: 622 GILHQTSCAYTPQQNGVAERKNRHLVETTRTILIHGDVPQHFWGDAVLSACYLINRMPSS 681

Query: 41  VLQGKPPFEVLF 6
           VL  K P  +LF
Sbjct: 682 VLDNKIPHSILF 693


>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 38/73 (52%), Positives = 48/73 (65%)
 Frame = -3

Query: 224 KGIIHQTTCAYTPQQNGVIERKYRHXXXXXXXXXXXXXLPLRF*GDSVLTATYLINRYPT 45
           +GIIHQT+C YTPQQNGV ERK RH             +PLRF GD+VL++ YLINR P+
Sbjct: 387 QGIIHQTSCPYTPQQNGVAERKNRHLIETARTLLIESHVPLRFWGDAVLSSCYLINRMPS 446

Query: 44  IVLQGKPPFEVLF 6
             +Q + P  +LF
Sbjct: 447 SSIQNQVPHSILF 459