BLASTX nr result
ID: Rheum21_contig00039215
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00039215
(357 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520529.1| pentatricopeptide repeat-containing protein,... 107 2e-21
gb|EMJ09415.1| hypothetical protein PRUPE_ppa018916mg, partial [... 105 6e-21
gb|EOY33964.1| Pentatricopeptide repeat superfamily protein [The... 96 7e-18
ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 94 2e-17
ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_004240613.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
emb|CBI16090.3| unnamed protein product [Vitis vinifera] 93 3e-17
ref|XP_002314162.2| hypothetical protein POPTR_0009s04000g, part... 89 5e-16
ref|XP_006484505.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_006484504.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_006437631.1| hypothetical protein CICLE_v10030859mg [Citr... 88 1e-15
gb|EMJ26112.1| hypothetical protein PRUPE_ppa021912mg, partial [... 85 9e-15
gb|EMT17047.1| Pentatricopeptide repeat-containing protein [Aegi... 84 3e-14
gb|ABK26521.1| unknown [Picea sitchensis] 84 3e-14
ref|XP_006646734.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-14
ref|XP_004289402.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-14
ref|XP_006846299.1| hypothetical protein AMTR_s00012p00252800 [A... 82 1e-13
ref|XP_004288820.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_003567523.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
>ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540371|gb|EEF41942.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 606
Score = 107 bits (266), Expect = 2e-21
Identities = 49/79 (62%), Positives = 63/79 (79%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
M PGPS+YK+LLSAC +HGN E+A R++++LLEL+P DPA Y+LLS+ LATE WD+A
Sbjct: 528 MDPGPSVYKALLSACLVHGNREIAVRSARKLLELWPDDPATYILLSNMLATEGYWDDAAD 587
Query: 183 VRKLMQERRMLKNPAYSGI 239
VRKLM +R + KNP YS I
Sbjct: 588 VRKLMCDRGVRKNPGYSWI 606
>gb|EMJ09415.1| hypothetical protein PRUPE_ppa018916mg, partial [Prunus persica]
Length = 562
Score = 105 bits (262), Expect = 6e-21
Identities = 46/79 (58%), Positives = 63/79 (79%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
++PGPS+YK+LLSAC++HGN E+A R++K+L EL+P DPA Y+LLS+ L T CWD+A G
Sbjct: 484 IEPGPSVYKALLSACKVHGNKEIALRSAKKLQELWPNDPATYILLSNVLVTGGCWDDAAG 543
Query: 183 VRKLMQERRMLKNPAYSGI 239
VRKLM +R + K P +S I
Sbjct: 544 VRKLMYDRGIRKTPGHSWI 562
>gb|EOY33964.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 623
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/79 (56%), Positives = 59/79 (74%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
++PGPS+YK+LLSAC ++GN+E+A R++ RLLEL+P DPA YVLLS L WD+A G
Sbjct: 545 IEPGPSVYKALLSACEVYGNIEIATRSANRLLELWPNDPATYVLLSKVLKMGNDWDDAAG 604
Query: 183 VRKLMQERRMLKNPAYSGI 239
V KLM +R + KNP S I
Sbjct: 605 VCKLMSDRGVRKNPGCSWI 623
>ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11290-like [Cucumis sativus]
Length = 616
Score = 93.6 bits (231), Expect = 2e-17
Identities = 41/77 (53%), Positives = 58/77 (75%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
++PG SIYK+LLSAC IHGN ++A R +K+LLELYP DPA Y++LS++L + WD+A
Sbjct: 538 IEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDGYWDDAAS 597
Query: 183 VRKLMQERRMLKNPAYS 233
+R+LM R + K P +S
Sbjct: 598 IRRLMSNRGVKKEPGFS 614
>ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 616
Score = 93.6 bits (231), Expect = 2e-17
Identities = 41/77 (53%), Positives = 58/77 (75%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
++PG SIYK+LLSAC IHGN ++A R +K+LLELYP DPA Y++LS++L + WD+A
Sbjct: 538 IEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDGYWDDAAS 597
Query: 183 VRKLMQERRMLKNPAYS 233
+R+LM R + K P +S
Sbjct: 598 IRRLMSNRGVKKEPGFS 614
>ref|XP_004240613.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Solanum lycopersicum]
Length = 536
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/77 (55%), Positives = 59/77 (76%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
++PGPS+YKSLL+AC++HGN +A ++K+L+EL P DPA YVLL++ LA E W +AEG
Sbjct: 458 IEPGPSVYKSLLNACQLHGNKGLAVISAKKLVELRPNDPATYVLLANVLALEGNWKDAEG 517
Query: 183 VRKLMQERRMLKNPAYS 233
RKLM +R + K P YS
Sbjct: 518 QRKLMLDRGLSKKPGYS 534
>ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/79 (51%), Positives = 58/79 (73%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
++PGPS+YK+LLSAC++HGN+E+A R +K+LL++ P DP YVLLS+ AT WD
Sbjct: 550 IEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLSNVQATVGYWDNVAS 609
Query: 183 VRKLMQERRMLKNPAYSGI 239
+RK+M +R + K P YS I
Sbjct: 610 IRKVMCDRGVRKEPGYSWI 628
>emb|CBI16090.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/79 (51%), Positives = 58/79 (73%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
++PGPS+YK+LLSAC++HGN+E+A R +K+LL++ P DP YVLLS+ AT WD
Sbjct: 380 IEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLSNVQATVGYWDNVAS 439
Query: 183 VRKLMQERRMLKNPAYSGI 239
+RK+M +R + K P YS I
Sbjct: 440 IRKVMCDRGVRKEPGYSWI 458
>ref|XP_002314162.2| hypothetical protein POPTR_0009s04000g, partial [Populus
trichocarpa] gi|550330984|gb|EEE88117.2| hypothetical
protein POPTR_0009s04000g, partial [Populus trichocarpa]
Length = 606
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +3
Query: 9 PGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEGVR 188
P PS+YK+LLSA +HGN E+A R++K+LLEL+P DPA YVLLSS L + WD+A +R
Sbjct: 526 PAPSVYKALLSASLVHGNREIAARSAKKLLELWPNDPATYVLLSSVLTVDGNWDDAADLR 585
Query: 189 KLMQERRMLKNP 224
KLM +R + K P
Sbjct: 586 KLMCDRGLRKKP 597
>ref|XP_006484505.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 752
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/78 (52%), Positives = 58/78 (74%)
Frame = +3
Query: 6 KPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEGV 185
+P P++Y+SLLS CRIHGN E+ E AS++LL L PK+ AA+VLLS + + CW+ A V
Sbjct: 670 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKVYSEDGCWESAAIV 729
Query: 186 RKLMQERRMLKNPAYSGI 239
R+ M E+++LK+P YS I
Sbjct: 730 RRGMTEKQVLKDPGYSWI 747
>ref|XP_006484504.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 798
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/78 (52%), Positives = 58/78 (74%)
Frame = +3
Query: 6 KPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEGV 185
+P P++Y+SLLS CRIHGN E+ E AS++LL L PK+ AA+VLLS + + CW+ A V
Sbjct: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKVYSEDGCWESAAIV 775
Query: 186 RKLMQERRMLKNPAYSGI 239
R+ M E+++LK+P YS I
Sbjct: 776 RRGMTEKQVLKDPGYSWI 793
>ref|XP_006437631.1| hypothetical protein CICLE_v10030859mg [Citrus clementina]
gi|557539827|gb|ESR50871.1| hypothetical protein
CICLE_v10030859mg [Citrus clementina]
Length = 694
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/78 (52%), Positives = 58/78 (74%)
Frame = +3
Query: 6 KPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEGV 185
+P P++Y+SLLS CRIHGN E+ E AS++LL L PK+ AA+VLLS + + CW+ A V
Sbjct: 612 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKVYSEDGCWESAAIV 671
Query: 186 RKLMQERRMLKNPAYSGI 239
R+ M E+++LK+P YS I
Sbjct: 672 RRGMTEKQVLKDPGYSWI 689
>gb|EMJ26112.1| hypothetical protein PRUPE_ppa021912mg, partial [Prunus persica]
Length = 744
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/83 (49%), Positives = 57/83 (68%)
Frame = +3
Query: 9 PGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEGVR 188
P P+I +SLLS CRIHGN+E+ E +K+L++L P++ YVLLS + E W++A +R
Sbjct: 634 PWPAILRSLLSGCRIHGNIELGEWTAKKLVQLAPENDVPYVLLSKVYSEEGSWEDATKIR 693
Query: 189 KLMQERRMLKNPAYSGIGSSEDG 257
+ M ER +LKN YS I S EDG
Sbjct: 694 REMIERGVLKNTGYSWIESKEDG 716
>gb|EMT17047.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 465
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/75 (50%), Positives = 56/75 (74%)
Frame = +3
Query: 9 PGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEGVR 188
PG S+Y++LLSAC+IHGN+E+A R + RL+ELYP D +A+V LS + A + W +A VR
Sbjct: 382 PGVSVYRALLSACQIHGNLEIAIRVTTRLIELYPHDSSAHVQLSKAFAGDGHWGDAAEVR 441
Query: 189 KLMQERRMLKNPAYS 233
+ M + ++KNPA+S
Sbjct: 442 EAMAGKGIVKNPAWS 456
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 83.6 bits (205), Expect = 3e-14
Identities = 39/79 (49%), Positives = 57/79 (72%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
++P S++ SLL ACR+HGN+E+AERA ++L+EL P++P YVLLS+ A WD+A
Sbjct: 163 VEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGK 222
Query: 183 VRKLMQERRMLKNPAYSGI 239
VRK+M++R + K P S I
Sbjct: 223 VRKMMKDRSVKKEPGCSWI 241
>ref|XP_006646734.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Oryza brachyantha]
Length = 569
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/79 (46%), Positives = 58/79 (73%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
+KPG S+Y++LLSAC+IHGN+E+A + SKRL+EL P D + +V LS++ A + WD A
Sbjct: 484 IKPGASVYRALLSACQIHGNLEIAIQVSKRLIELNPHDSSVHVQLSNAFAGDGRWDNAAE 543
Query: 183 VRKLMQERRMLKNPAYSGI 239
+R+ M + ++K P++S I
Sbjct: 544 IREAMSGKGIVKEPSWSRI 562
>ref|XP_004289402.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Fragaria vesca subsp. vesca]
Length = 558
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
++PG S+Y++LLSA ++HGN E+A R++ L +L P D Y+LLS+ L T WD+A G
Sbjct: 480 IEPGASVYRALLSASQVHGNKELAFRSATTLQQLCPNDHGTYILLSNVLLTRGSWDDAAG 539
Query: 183 VRKLMQERRMLKNPAYSGI 239
VRK M +R + K P YS I
Sbjct: 540 VRKFMYDRGIRKTPGYSWI 558
>ref|XP_006846299.1| hypothetical protein AMTR_s00012p00252800 [Amborella trichopoda]
gi|548849069|gb|ERN07974.1| hypothetical protein
AMTR_s00012p00252800 [Amborella trichopoda]
Length = 627
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/80 (51%), Positives = 53/80 (66%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
+KP SIY++LLSACR+HGNM +A RA+ LLEL P D +AYVLLS+ + W + E
Sbjct: 522 IKPEASIYRALLSACRVHGNMGMAVRAAGCLLELCPSDASAYVLLSNVFGEKGYWADKEH 581
Query: 183 VRKLMQERRMLKNPAYSGIG 242
VR LM + K P YS +G
Sbjct: 582 VRMLMGSNGVTKEPGYSWVG 601
>ref|XP_004288820.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Fragaria vesca subsp. vesca]
Length = 659
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 3 MKPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEG 182
MKP + LL ACRIHGN+E AERA+K+LLEL P D YVLLS+ ++ W+EA+
Sbjct: 452 MKPDRFVLGGLLGACRIHGNLEAAERAAKQLLELSPYDEGTYVLLSNLYSSMGKWEEAKK 511
Query: 183 VRKLMQERRMLKNPAYS 233
+RKLM ER + K P S
Sbjct: 512 IRKLMAERNIKKPPGCS 528
>ref|XP_003567523.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 577
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/85 (45%), Positives = 57/85 (67%)
Frame = +3
Query: 6 KPGPSIYKSLLSACRIHGNMEVAERASKRLLELYPKDPAAYVLLSSSLATEACWDEAEGV 185
+PG S+Y++LLSAC+IHGN+E+A R S+RL+ELYP D +A+V LS + A + W A V
Sbjct: 493 EPGVSVYRALLSACQIHGNLEIAIRTSRRLMELYPHDSSAHVQLSKAFAGDGHWGNAAEV 552
Query: 186 RKLMQERRMLKNPAYSGIGSSEDGG 260
R+ M + + K PA+S + G
Sbjct: 553 REAMTGKGIAKIPAWSCVEDRMQAG 577