BLASTX nr result
ID: Rheum21_contig00039133
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00039133
(239 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004298620.1| PREDICTED: DNA repair protein XRCC2 homolog ... 71 2e-10
ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp.... 70 4e-10
ref|XP_006280631.1| hypothetical protein CARUB_v10026593mg [Caps... 69 5e-10
ref|XP_006394144.1| hypothetical protein EUTSA_v10005594mg [Eutr... 69 8e-10
ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog ... 69 8e-10
ref|XP_004156145.1| PREDICTED: DNA repair protein XRCC2 homolog ... 68 1e-09
ref|XP_004151653.1| PREDICTED: DNA repair protein XRCC2 homolog,... 68 1e-09
dbj|BAB11419.1| unnamed protein product [Arabidopsis thaliana] 67 2e-09
ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidop... 67 2e-09
ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidop... 67 2e-09
ref|NP_001032141.1| DNA repair protein XRCC2-like protein [Arabi... 67 2e-09
ref|XP_006366546.1| PREDICTED: DNA repair protein XRCC2 homolog ... 64 2e-08
ref|XP_006365613.1| PREDICTED: DNA repair protein XRCC2 homolog ... 64 2e-08
ref|XP_006367954.1| PREDICTED: DNA repair protein XRCC2 homolog,... 64 3e-08
ref|XP_004228889.1| PREDICTED: DNA repair protein XRCC2 homolog ... 64 3e-08
gb|EMJ27351.1| hypothetical protein PRUPE_ppa014924mg, partial [... 62 8e-08
gb|EXB97291.1| hypothetical protein L484_024152 [Morus notabilis] 61 1e-07
ref|XP_004505753.1| PREDICTED: DNA repair protein XRCC2 homolog ... 61 2e-07
ref|XP_006847000.1| hypothetical protein AMTR_s00017p00136420 [A... 60 2e-07
gb|ESW03671.1| hypothetical protein PHAVU_011G032400g [Phaseolus... 59 5e-07
>ref|XP_004298620.1| PREDICTED: DNA repair protein XRCC2 homolog [Fragaria vesca subsp.
vesca]
Length = 316
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/68 (54%), Positives = 42/68 (61%)
Frame = +2
Query: 35 MAVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQV 214
MA + WI DETA EM SRV ER GNV+E+AG S SAK+QIL+Q
Sbjct: 1 MAAKRWIDGDETAAEMLSRVSSERPFLLLPPLHRVPLRVGNVVELAGPSSSAKTQILIQA 60
Query: 215 AVNCILPK 238
AVNCILPK
Sbjct: 61 AVNCILPK 68
>ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310742|gb|EFH41166.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 389
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2
Query: 32 EMAVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQ 211
E R WI DETA +M SRVL++R GNV+EI GASPSAK+QIL+Q
Sbjct: 3 EEEARSWICGDETAKQMLSRVLKDRAFMLLPPLHRVPLRAGNVVEITGASPSAKTQILIQ 62
Query: 212 VAVNCILPK 238
A++CILPK
Sbjct: 63 AAISCILPK 71
>ref|XP_006280631.1| hypothetical protein CARUB_v10026593mg [Capsella rubella]
gi|565433449|ref|XP_006280632.1| hypothetical protein
CARUB_v10026593mg [Capsella rubella]
gi|482549335|gb|EOA13529.1| hypothetical protein
CARUB_v10026593mg [Capsella rubella]
gi|482549336|gb|EOA13530.1| hypothetical protein
CARUB_v10026593mg [Capsella rubella]
Length = 379
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/72 (47%), Positives = 45/72 (62%)
Frame = +2
Query: 23 GRSEMAVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQI 202
G R WI+ DETA +M SRVL++R GNV+E+ GASP+AK+QI
Sbjct: 37 GEGASEARGWIRGDETAKQMLSRVLKDRAFLLLPPLHRVPLRAGNVVEVTGASPAAKTQI 96
Query: 203 LMQVAVNCILPK 238
L+Q A++CILPK
Sbjct: 97 LIQAAISCILPK 108
>ref|XP_006394144.1| hypothetical protein EUTSA_v10005594mg [Eutrema salsugineum]
gi|557090783|gb|ESQ31430.1| hypothetical protein
EUTSA_v10005594mg [Eutrema salsugineum]
Length = 355
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = +2
Query: 50 WIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQVAVNCI 229
WI+ DETA +M SRVL++R GNV+EI GASPSAK+QIL+Q A++CI
Sbjct: 9 WIRGDETAKQMLSRVLRDRAFLLLPPLHRVPLRAGNVVEITGASPSAKTQILIQAAISCI 68
Query: 230 LPK 238
LPK
Sbjct: 69 LPK 71
>ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog [Vitis vinifera]
Length = 315
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/68 (55%), Positives = 42/68 (61%)
Frame = +2
Query: 35 MAVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQV 214
MA R WI DE+A EM SRV ER GNV+EIAG SPSAK+QIL+Q
Sbjct: 1 MAARGWICTDESAKEMLSRVSAERSLMLLPPLHRVPLRLGNVVEIAGPSPSAKTQILIQA 60
Query: 215 AVNCILPK 238
AV CILPK
Sbjct: 61 AVYCILPK 68
>ref|XP_004156145.1| PREDICTED: DNA repair protein XRCC2 homolog [Cucumis sativus]
Length = 278
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = +2
Query: 35 MAVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQV 214
MA+ +WI DE+A EM RVL+ER GNV+E+ G S SAK+QIL+Q
Sbjct: 1 MALGQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQA 60
Query: 215 AVNCILPK 238
AVNCILPK
Sbjct: 61 AVNCILPK 68
>ref|XP_004151653.1| PREDICTED: DNA repair protein XRCC2 homolog, partial [Cucumis
sativus]
Length = 110
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = +2
Query: 35 MAVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQV 214
MA+ +WI DE+A EM RVL+ER GNV+E+ G S SAK+QIL+Q
Sbjct: 1 MALGQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQA 60
Query: 215 AVNCILPK 238
AVNCILPK
Sbjct: 61 AVNCILPK 68
>dbj|BAB11419.1| unnamed protein product [Arabidopsis thaliana]
Length = 403
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +2
Query: 44 REWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQVAVN 223
R WI+ DETA +M SRVL++R GNV+EI GAS SAK+QIL+Q A++
Sbjct: 7 RSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILIQAAIS 66
Query: 224 CILPK 238
CILPK
Sbjct: 67 CILPK 71
>ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
gi|55583880|sp|Q682D3.2|XRCC2_ARATH RecName: Full=DNA
repair protein XRCC2 homolog; AltName: Full=X-ray repair
cross-complementing protein 2 homolog; Short=AtXRCC2
gi|27524915|emb|CAD12880.1| putative X-ray repair
cross-complementing protein 2 [Arabidopsis thaliana]
gi|332010528|gb|AED97911.1| DNA repair protein
XRCC2-like protein [Arabidopsis thaliana]
Length = 372
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +2
Query: 44 REWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQVAVN 223
R WI+ DETA +M SRVL++R GNV+EI GAS SAK+QIL+Q A++
Sbjct: 7 RSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILIQAAIS 66
Query: 224 CILPK 238
CILPK
Sbjct: 67 CILPK 71
>ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
gi|332010527|gb|AED97910.1| DNA repair protein
XRCC2-like protein [Arabidopsis thaliana]
Length = 342
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +2
Query: 44 REWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQVAVN 223
R WI+ DETA +M SRVL++R GNV+EI GAS SAK+QIL+Q A++
Sbjct: 7 RSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILIQAAIS 66
Query: 224 CILPK 238
CILPK
Sbjct: 67 CILPK 71
>ref|NP_001032141.1| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
gi|51969010|dbj|BAD43197.1| putative protein
[Arabidopsis thaliana] gi|332010529|gb|AED97912.1| DNA
repair protein XRCC2-like protein [Arabidopsis thaliana]
Length = 295
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +2
Query: 44 REWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQVAVN 223
R WI+ DETA +M SRVL++R GNV+EI GAS SAK+QIL+Q A++
Sbjct: 7 RSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILIQAAIS 66
Query: 224 CILPK 238
CILPK
Sbjct: 67 CILPK 71
>ref|XP_006366546.1| PREDICTED: DNA repair protein XRCC2 homolog [Solanum tuberosum]
Length = 128
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 38 AVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXX-GNVLEIAGASPSAKSQILMQV 214
+ REWI+ DETA + +RV ER GNV+EI G SPS+K++ILMQ
Sbjct: 4 SAREWIEADETAKQFLTRVFSERPFLPLPPPLHRIPLRPGNVVEIVGPSPSSKTRILMQA 63
Query: 215 AVNCILPK 238
A+NCILPK
Sbjct: 64 AINCILPK 71
>ref|XP_006365613.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Solanum
tuberosum] gi|565400189|ref|XP_006365614.1| PREDICTED:
DNA repair protein XRCC2 homolog isoform X2 [Solanum
tuberosum]
Length = 338
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 38 AVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXX-GNVLEIAGASPSAKSQILMQV 214
+ REWI+ DETA + +RV ER GNV+EI G SPS+K++ILMQ
Sbjct: 4 SAREWIEEDETAKQFLTRVFSERPFLPLPPPLHRIPLRPGNVVEIVGPSPSSKTRILMQA 63
Query: 215 AVNCILPK 238
A+NCILPK
Sbjct: 64 AINCILPK 71
>ref|XP_006367954.1| PREDICTED: DNA repair protein XRCC2 homolog, partial [Solanum
tuberosum]
Length = 111
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 38 AVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXX-GNVLEIAGASPSAKSQILMQV 214
+ REWI+ DETA + +RV ER GNV+EI G SPS+K++ILMQ
Sbjct: 4 SAREWIEVDETAKQFLTRVFSERPFQPLPPPLHRIPLRPGNVVEIVGPSPSSKTRILMQA 63
Query: 215 AVNCILPK 238
A+NCILPK
Sbjct: 64 AINCILPK 71
>ref|XP_004228889.1| PREDICTED: DNA repair protein XRCC2 homolog [Solanum lycopersicum]
Length = 292
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 38 AVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXX-GNVLEIAGASPSAKSQILMQV 214
A R+WI+ DETA + +RV ER GNV+EI G SPS+K++ILMQ
Sbjct: 4 AARKWIEADETAKQFLARVFSERPFLPLPPPLHRIPLRPGNVVEIVGPSPSSKTRILMQA 63
Query: 215 AVNCILPK 238
A+NCILPK
Sbjct: 64 AINCILPK 71
>gb|EMJ27351.1| hypothetical protein PRUPE_ppa014924mg, partial [Prunus persica]
Length = 309
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/68 (47%), Positives = 39/68 (57%)
Frame = +2
Query: 35 MAVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQV 214
MA + WI DE+A +M RV ER GNV+E+ G S SAK+ IL+Q
Sbjct: 1 MAAKGWIDGDESAAKMLGRVATERPFLLLPPLHRVPLRVGNVVELVGPSASAKTHILIQA 60
Query: 215 AVNCILPK 238
AVNCILPK
Sbjct: 61 AVNCILPK 68
>gb|EXB97291.1| hypothetical protein L484_024152 [Morus notabilis]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/68 (44%), Positives = 40/68 (58%)
Frame = +2
Query: 35 MAVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQV 214
M + WI DE+A EM +RV ER GNV+E+ G SPS+K+ IL+Q
Sbjct: 1 MEAKRWIDVDESAAEMLARVSTERPFLLLPPLHRLPLRVGNVVELVGPSPSSKTLILIQA 60
Query: 215 AVNCILPK 238
A++CILPK
Sbjct: 61 AISCILPK 68
>ref|XP_004505753.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Cicer
arietinum] gi|502144799|ref|XP_004505754.1| PREDICTED:
DNA repair protein XRCC2 homolog isoform X2 [Cicer
arietinum] gi|502144801|ref|XP_004505755.1| PREDICTED:
DNA repair protein XRCC2 homolog isoform X3 [Cicer
arietinum]
Length = 328
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/66 (46%), Positives = 35/66 (53%)
Frame = +2
Query: 41 VREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAKSQILMQVAV 220
V WI DE EM RV R GNVLE+ G SPSAK+QIL+Q A+
Sbjct: 9 VERWIMGDENGSEMLKRVCSVRPFILPPPLHRVPLRVGNVLELVGPSPSAKTQILIQTAI 68
Query: 221 NCILPK 238
CILPK
Sbjct: 69 TCILPK 74
>ref|XP_006847000.1| hypothetical protein AMTR_s00017p00136420 [Amborella trichopoda]
gi|548850029|gb|ERN08581.1| hypothetical protein
AMTR_s00017p00136420 [Amborella trichopoda]
Length = 284
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 38 AVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXX-GNVLEIAGASPSAKSQILMQV 214
+ REWI+ DE+A + RV ER GNV+EI G SPSAKS IL+Q
Sbjct: 3 SAREWIKCDESAKSLMDRVSMERPSLLLPPPLHRAPLCAGNVVEIVGPSPSAKSYILLQA 62
Query: 215 AVNCILPK 238
A+NCILPK
Sbjct: 63 AINCILPK 70
>gb|ESW03671.1| hypothetical protein PHAVU_011G032400g [Phaseolus vulgaris]
Length = 317
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/75 (38%), Positives = 42/75 (56%)
Frame = +2
Query: 14 QKRGRSEMAVREWIQPDETAGEMFSRVLQERXXXXXXXXXXXXXXXGNVLEIAGASPSAK 193
+++ + + +WI+ DE+ EM SRV R GNVLE+ G SPSAK
Sbjct: 2 KEKEKEREEIEKWIEGDESGAEMLSRVSSVRPFVFPPPLHRVPLRVGNVLELVGPSPSAK 61
Query: 194 SQILMQVAVNCILPK 238
+QIL+Q A+ +LPK
Sbjct: 62 TQILIQAAITSVLPK 76