BLASTX nr result
ID: Rheum21_contig00039121
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00039121
(281 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
emb|CBI27249.3| unnamed protein product [Vitis vinifera] 106 4e-21
gb|EMJ28156.1| hypothetical protein PRUPE_ppa002695mg [Prunus pe... 103 3e-20
ref|XP_003607763.1| Pentatricopeptide repeat-containing protein ... 100 3e-19
gb|EOY01788.1| Pentatricopeptide repeat superfamily protein [The... 98 1e-18
ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containi... 95 8e-18
ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containi... 95 8e-18
ref|XP_002316102.2| pentatricopeptide repeat-containing family p... 94 1e-17
ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citr... 94 2e-17
gb|ESW30612.1| hypothetical protein PHAVU_002G167800g [Phaseolus... 92 5e-17
ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp.... 92 7e-17
ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containi... 92 9e-17
ref|NP_178437.1| pentatricopeptide repeat-containing protein [Ar... 92 9e-17
ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Caps... 91 2e-16
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 90 4e-16
ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
ref|XP_002311327.1| predicted protein [Populus trichocarpa] 79 5e-13
ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arab... 75 7e-12
gb|EPS69874.1| hypothetical protein M569_04890 [Genlisea aurea] 74 2e-11
>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein
VITISV_009460 [Vitis vinifera]
Length = 700
Score = 112 bits (279), Expect = 7e-23
Identities = 50/79 (63%), Positives = 61/79 (77%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
LHSRFDLGE+A RML+LHPD+ACYYVL+S YAS GRW QA++V LM Q+GL K PGW
Sbjct: 621 LHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGW 680
Query: 183 SSTEMEINKEFHPFRVASH 239
S ++E + +F P VASH
Sbjct: 681 SLVDIETSNDFSPLIVASH 699
>emb|CBI27249.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 106 bits (264), Expect = 4e-21
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
LHSRFDLGE+A RML+LHPD+ACYYVL+S YAS GRW QA++V LM Q+GL K PGW
Sbjct: 622 LHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGW 681
Query: 183 SSTEMEINKEFHPFRVASHG 242
S ++E + +F P V G
Sbjct: 682 SLVDIETSNDFSPLIVFCPG 701
>gb|EMJ28156.1| hypothetical protein PRUPE_ppa002695mg [Prunus persica]
Length = 644
Score = 103 bits (256), Expect = 3e-20
Identities = 48/80 (60%), Positives = 60/80 (75%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
L+SRFDLGE A RML+LHPDEACYYVL+S YAS+GRW Q ++VR LM Q+GL+KS +
Sbjct: 565 LYSRFDLGEAAIRRMLELHPDEACYYVLMSNLYASDGRWSQVNQVRELMKQRGLSKSLAY 624
Query: 183 SSTEMEINKEFHPFRVASHG 242
S EM+I + P +VA G
Sbjct: 625 SQVEMDIRNDIAPVKVACVG 644
>ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 871
Score = 100 bits (248), Expect = 3e-19
Identities = 45/79 (56%), Positives = 56/79 (70%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
LHS FD GE+A RML+LHPD+ACYYVL+S YAS+GRW EVR ++ Q+GLNK PG
Sbjct: 624 LHSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPGV 683
Query: 183 SSTEMEINKEFHPFRVASH 239
S EM++N H + SH
Sbjct: 684 SLVEMDVNNTTHVNVLQSH 702
>gb|EOY01788.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 714
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/77 (58%), Positives = 55/77 (71%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
LHSRFDLGE+A +ML LHPD CYYVL+S YAS+GRW Q ++VR LM +GL+K P
Sbjct: 635 LHSRFDLGEVAIKKMLDLHPDRGCYYVLISNLYASDGRWTQVNQVRELMKHRGLSKDPAC 694
Query: 183 SSTEMEINKEFHPFRVA 233
S TEM+ K+ RVA
Sbjct: 695 SITEMDTYKDLSYSRVA 711
>ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 597
Score = 95.1 bits (235), Expect = 8e-18
Identities = 44/78 (56%), Positives = 59/78 (75%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
L+SRFDLGE+ +ML+LHPD+ACYYVLVS YAS+GRW + ++VR LM Q+GL+KSPG
Sbjct: 518 LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 577
Query: 183 SSTEMEINKEFHPFRVAS 236
S +++ +F RV S
Sbjct: 578 SLVDLDNANDFSFSRVVS 595
>ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 709
Score = 95.1 bits (235), Expect = 8e-18
Identities = 44/78 (56%), Positives = 59/78 (75%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
L+SRFDLGE+ +ML+LHPD+ACYYVLVS YAS+GRW + ++VR LM Q+GL+KSPG
Sbjct: 630 LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 689
Query: 183 SSTEMEINKEFHPFRVAS 236
S +++ +F RV S
Sbjct: 690 SLVDLDNANDFSFSRVVS 707
>ref|XP_002316102.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550329982|gb|EEF02273.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 665
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/78 (56%), Positives = 56/78 (71%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
LHSRFDLGE+A RML+LHP EACYYVL+ YAS+ W + +VR LM Q+GL K+PG
Sbjct: 586 LHSRFDLGELAIKRMLELHPGEACYYVLMCNLYASDASWSKVKQVRELMKQRGLMKTPGC 645
Query: 183 SSTEMEINKEFHPFRVAS 236
S EM+++ +F R AS
Sbjct: 646 SLMEMDVDHDFSFSRAAS 663
>ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 94.4 bits (233), Expect = 1e-17
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
LHSRF+LG A +ML+LHPDEACYYVLVS YAS+GRW +VR ++ Q+GLNK PG
Sbjct: 621 LHSRFELGGAAIKKMLELHPDEACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGC 680
Query: 183 SSTEMEINKE 212
SS EM++ +
Sbjct: 681 SSVEMDLQND 690
>ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citrus clementina]
gi|557540977|gb|ESR52021.1| hypothetical protein
CICLE_v10033606mg [Citrus clementina]
Length = 716
Score = 93.6 bits (231), Expect = 2e-17
Identities = 43/76 (56%), Positives = 58/76 (76%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
L+SRFDLGE+ +ML+LHPD+ACYYVLVS YAS+GRW + ++VR LM Q+GL+KSPG
Sbjct: 630 LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 689
Query: 183 SSTEMEINKEFHPFRV 230
S +++ +F RV
Sbjct: 690 SLVDLDNANDFSFSRV 705
>gb|ESW30612.1| hypothetical protein PHAVU_002G167800g [Phaseolus vulgaris]
Length = 702
Score = 92.4 bits (228), Expect = 5e-17
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
LHSRF++GE A RML+LHPDEA YYVLVS AS+GRW +VR ++ Q+GLNK PG
Sbjct: 624 LHSRFEMGEAAIKRMLELHPDEASYYVLVSNLCASDGRWGMVKQVREMIKQRGLNKVPGC 683
Query: 183 SSTEMEINKE 212
SS EM++N +
Sbjct: 684 SSVEMDLNND 693
>ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 92.0 bits (227), Expect = 7e-17
Identities = 44/66 (66%), Positives = 50/66 (75%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
+HSRFDLGEI +ML LHPD+A YYVLVS YAS+GRW QA EVRNLM Q+GL+K G
Sbjct: 638 MHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGH 697
Query: 183 SSTEME 200
S E E
Sbjct: 698 SIMESE 703
>ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cicer arietinum]
Length = 1334
Score = 91.7 bits (226), Expect = 9e-17
Identities = 40/68 (58%), Positives = 51/68 (75%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
LHS FD GE+A RML+LHPD+A YYVL+S YAS+GRW +VR ++ Q+GLNK PG
Sbjct: 619 LHSNFDFGEVAIRRMLELHPDQASYYVLISNLYASDGRWGMVKQVRKMIKQRGLNKVPGV 678
Query: 183 SSTEMEIN 206
S EM++N
Sbjct: 679 SLVEMDVN 686
>ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis
thaliana] gi|330250600|gb|AEC05694.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 91.7 bits (226), Expect = 9e-17
Identities = 43/64 (67%), Positives = 50/64 (78%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
+HSRFDLGEI +ML LHPD+A YYVLVS YAS+GRW QA EVRNLM Q+GL+K G
Sbjct: 626 MHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGH 685
Query: 183 SSTE 194
S+ E
Sbjct: 686 STME 689
>ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Capsella rubella]
gi|482561043|gb|EOA25234.1| hypothetical protein
CARUB_v10018547mg [Capsella rubella]
Length = 701
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
+HSRFDLGEI +ML LHPD+A YYVLVS YAS+GRW QA EVR LM Q+GL+K G
Sbjct: 631 MHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRILMKQRGLSKIAGH 690
Query: 183 SSTEMEI 203
S+ E E+
Sbjct: 691 STMESEL 697
>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/64 (64%), Positives = 51/64 (79%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
L+SRFDLGE+ ML+LH +EACYYVLVS YAS+G+W Q +EVR+LM Q+GLNK PG+
Sbjct: 1677 LYSRFDLGEVVVREMLQLHRNEACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLNKVPGY 1736
Query: 183 SSTE 194
S E
Sbjct: 1737 SLVE 1740
>ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 706
Score = 88.6 bits (218), Expect = 8e-16
Identities = 39/69 (56%), Positives = 53/69 (76%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
L+SRFDLG++A RML+LHP+EA YYVL+ YAS+GRW Q ++VR LM Q+GL+KS +
Sbjct: 630 LYSRFDLGKVAIKRMLELHPNEASYYVLMCNLYASDGRWSQVNQVRELMKQRGLSKSQAY 689
Query: 183 SSTEMEINK 209
S +M+ K
Sbjct: 690 SQVQMDFRK 698
>ref|XP_002311327.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/66 (57%), Positives = 46/66 (69%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
LHSRFDLGE+A RML+L EACY VL+ YAS+GRW Q +VR LM Q+GL K+
Sbjct: 258 LHSRFDLGEVAIKRMLELQTGEACYIVLMCNLYASDGRWNQVKQVRELMKQRGLMKTSDC 317
Query: 183 SSTEME 200
S EM+
Sbjct: 318 SLMEMD 323
>ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata] gi|297323489|gb|EFH53910.1| hypothetical protein
ARALYDRAFT_485272 [Arabidopsis lyrata subsp. lyrata]
Length = 1217
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/86 (40%), Positives = 54/86 (62%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
+HS D+G +AA ++ +L P+++ YYVL+S YA GRWE+ +RN+M KGL K+PG
Sbjct: 491 VHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPG- 549
Query: 183 SSTEMEINKEFHPFRVASHG*IQDRE 260
++ +E+N+ H F V Q E
Sbjct: 550 -ASNVEVNRIIHTFLVGDRSHPQSAE 574
>gb|EPS69874.1| hypothetical protein M569_04890 [Genlisea aurea]
Length = 922
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +3
Query: 3 LHSRFDLGEIAAMRMLKLHPDEACYYVLVSKFYASNGRWEQADEVRNLMNQKGLNKSPGW 182
+HS ++GEIAA ++L+ P + +YVLVS YA+ GRWE + VR+LM KGL K PG
Sbjct: 730 IHSDMEIGEIAAKKLLESDPHDPGHYVLVSNLYAAAGRWEDVERVRSLMKSKGLRKDPGC 789
Query: 183 SSTEMEINKEFHPFRV 230
S +EI +FH F V
Sbjct: 790 S--WIEIGNKFHSFVV 803