BLASTX nr result

ID: Rheum21_contig00039106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00039106
         (257 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ18925.1| hypothetical protein PRUPE_ppa005697mg [Prunus pe...    60   2e-07
gb|EOY26773.1| Regulator of Vps4 activity in the MVB pathway pro...    59   5e-07
emb|CBI28081.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_003533053.1| PREDICTED: uncharacterized protein LOC100792...    57   3e-06
ref|XP_004305290.1| PREDICTED: uncharacterized protein LOC101293...    55   9e-06

>gb|EMJ18925.1| hypothetical protein PRUPE_ppa005697mg [Prunus persica]
          Length = 447

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/78 (39%), Positives = 49/78 (62%)
 Frame = -2

Query: 253 YVNKELVEKLKANPPTREAKLELMKDIAKEFSVSWDHAFFDQNMQDGSTKGYNVQQRTGY 74
           +VNKELVE+LKA PPT+E K++L+ D+A+EFS+ WD    +Q +   S      Q R G 
Sbjct: 137 FVNKELVERLKAKPPTKEMKIQLLHDVAQEFSIEWDSKALEQKLYTPSPLDQG-QCRYG- 194

Query: 73  ERAPSNNTSGYREVYQTR 20
             +P N+    ++ +++R
Sbjct: 195 --SPGNSDDDMQKSHKSR 210


>gb|EOY26773.1| Regulator of Vps4 activity in the MVB pathway protein, putative
           [Theobroma cacao]
          Length = 511

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/84 (36%), Positives = 44/84 (52%)
 Frame = -2

Query: 256 SYVNKELVEKLKANPPTREAKLELMKDIAKEFSVSWDHAFFDQNMQDGSTKGYNVQQRTG 77
           S++N+E V KLKA PPT+E KL+LM D+A+EFS+ WD    +Q +        N      
Sbjct: 136 SFLNQEFVWKLKAEPPTKEMKLQLMHDVAQEFSIEWDSKALEQKLFKPPPPQQNEAWHKS 195

Query: 76  YERAPSNNTSGYREVYQTRPYTNN 5
            + A  +    YR    T   +NN
Sbjct: 196 LDDADDDGHKLYRSKNDTFQKSNN 219


>emb|CBI28081.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/48 (54%), Positives = 33/48 (68%)
 Frame = -2

Query: 253 YVNKELVEKLKANPPTREAKLELMKDIAKEFSVSWDHAFFDQNMQDGS 110
           +VNKE  E L + PPTRE K++LM+DIA EFS+ WD   F+Q M   S
Sbjct: 137 FVNKEFAENLTSKPPTREKKIQLMQDIASEFSIRWDSRTFEQTMSKPS 184


>ref|XP_003533053.1| PREDICTED: uncharacterized protein LOC100792068 [Glycine max]
          Length = 322

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = -2

Query: 253 YVNKELVEKLKANPPTREAKLELMKDIAKEFSVSWDHAFFDQNMQDGST 107
           Y+NKE VEKL+ +PPTRE K+ L+ DIA+EFSV WD     Q +   S+
Sbjct: 137 YINKEFVEKLRQDPPTREMKIGLLYDIAQEFSVEWDDNALRQRLYTESS 185


>ref|XP_004305290.1| PREDICTED: uncharacterized protein LOC101293619 [Fragaria vesca
           subsp. vesca]
          Length = 448

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
 Frame = -2

Query: 256 SYVNKELVEKLKANPPTREAKLELMKDIAKEFSVSWDHAFFDQNM--------------- 122
           ++VNKELV+K K+NPPT+E K++LM  IAKE S+ W     +Q +               
Sbjct: 135 AFVNKELVDKFKSNPPTKEMKVQLMHHIAKEHSIEWGSKALEQKLFTPPSTNKVQPRYGS 194

Query: 121 -QDGSTKGYNVQQRTGYERAPSNNTSGYREVYQT 23
             DG    Y  Q++        N   G R  Y T
Sbjct: 195 QCDGDDDMYRSQKKDNAIPKRKNKADGDRRSYVT 228


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