BLASTX nr result

ID: Rheum21_contig00039040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00039040
         (483 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006590690.1| PREDICTED: GATA transcription factor 18-like...    58   1e-06
gb|EXB37261.1| GATA transcription factor 18 [Morus notabilis]          55   1e-05

>ref|XP_006590690.1| PREDICTED: GATA transcription factor 18-like [Glycine max]
          Length = 245

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/94 (40%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
 Frame = +1

Query: 160 MVGPCPCGMFPCHGGYQCCXXXXXXXXXXXHLYTPYDDAGDYY--------YSPSVDCTL 315
           ++GPC CGMF      Q             H   PYDD+ + Y         S SVDCTL
Sbjct: 12  VMGPCTCGMFHS----QTTSSFAMFFSMPNHKPPPYDDSDNIYDYSSFTPSSSSSVDCTL 67

Query: 316 SLGTPATRRSSASDTQERRR----SNFCGWDFLQ 405
           SLGTP+TR S   + + R      SNFC WD LQ
Sbjct: 68  SLGTPSTRFSEDEEKRSRHERRSVSNFC-WDLLQ 100


>gb|EXB37261.1| GATA transcription factor 18 [Morus notabilis]
          Length = 271

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 40/97 (41%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
 Frame = +1

Query: 160 MVGPCPCGMFPCHGGYQCCXXXXXXXXXXXHL---YTPYDDAGDYYYS-------PSVDC 309
           MVGPC CGMF  H                 H    +  Y+    + YS        SVDC
Sbjct: 11  MVGPCSCGMFHHHSQSNSSSFSMLFSMPNNHKPFDHHQYEPDHHHMYSFGSPPSSSSVDC 70

Query: 310 TLSLGTPATRRSS--ASDTQERRR---SNFCGWDFLQ 405
           TLSLGTP+TR  S  A D ++R R   SNFC WD LQ
Sbjct: 71  TLSLGTPSTRLCSEDAVDVEKRTRHGVSNFC-WDLLQ 106


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