BLASTX nr result
ID: Rheum21_contig00038993
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00038993
(278 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 138 9e-31
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594... 137 1e-30
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] 137 1e-30
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 137 1e-30
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 137 1e-30
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 137 2e-30
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 134 1e-29
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 133 2e-29
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 133 2e-29
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 133 3e-29
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 132 5e-29
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 132 6e-29
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 132 6e-29
gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex] 131 8e-29
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 131 8e-29
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 131 8e-29
ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669... 131 1e-28
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624... 130 1e-28
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 130 1e-28
gb|AAQ72730.1| putative integrase [Petunia x hybrida] 129 4e-28
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 138 bits (347), Expect = 9e-31
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLFF+ +VRLHG+PR+IVSDRD+KF+ HFWRTLWGK+GTKLLFST+ +PQTDGQTEV N
Sbjct: 908 ADLFFKEIVRLHGLPRSIVSDRDAKFLSHFWRTLWGKIGTKLLFSTTCHPQTDGQTEVVN 967
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTLG LL T+LK N + WE L VEF NR
Sbjct: 968 RTLGTLLRTVLKKNLKSWEACLPHVEFAYNR 998
>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
Length = 1191
Score = 137 bits (346), Expect = 1e-30
Identities = 65/91 (71%), Positives = 74/91 (81%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLF + VV+LHG+PRTIVSDRD+KF+ HFWR LWGKLGTKLLFSTS +PQTDGQTEV N
Sbjct: 1046 ADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVN 1105
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTLG +L +LK WED+L IVEF NR
Sbjct: 1106 RTLGNMLRAILKGKLTSWEDYLPIVEFAYNR 1136
>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1096
Score = 137 bits (346), Expect = 1e-30
Identities = 65/91 (71%), Positives = 74/91 (81%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLF + VV+LHG+PRTIVSDRD+KF+ HFWR LWGKLGTKLLFSTS +PQTDGQTEV N
Sbjct: 772 ADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVN 831
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTLG +L +LK WED+L IVEF NR
Sbjct: 832 RTLGNMLRAILKGKLTSWEDYLPIVEFAYNR 862
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 137 bits (346), Expect = 1e-30
Identities = 65/91 (71%), Positives = 74/91 (81%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLF + VV+LHG+PRTIVSDRD+KF+ HFWR LWGKLGTKLLFSTS +PQTDGQTEV N
Sbjct: 1264 ADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVN 1323
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTLG +L +LK WED+L IVEF NR
Sbjct: 1324 RTLGNMLRAILKGKLTSWEDYLPIVEFAYNR 1354
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 137 bits (346), Expect = 1e-30
Identities = 65/91 (71%), Positives = 74/91 (81%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLF + VV+LHG+PRTIVSDRD+KF+ HFWR LWGKLGTKLLFSTS +PQTDGQTEV N
Sbjct: 1264 ADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVN 1323
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTLG +L +LK WED+L IVEF NR
Sbjct: 1324 RTLGNMLRAILKGKLTSWEDYLPIVEFAYNR 1354
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 137 bits (344), Expect = 2e-30
Identities = 64/91 (70%), Positives = 76/91 (83%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLFF+ +VRLHG+PR+IVSDRD+KF+ HFWRTLWGK+GTKLLFST+ +PQTDGQTEV N
Sbjct: 367 ADLFFKEIVRLHGLPRSIVSDRDAKFLSHFWRTLWGKIGTKLLFSTTCHPQTDGQTEVVN 426
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
+TLG LL T+LK N + WE L VEF NR
Sbjct: 427 KTLGTLLRTVLKKNLKSWEACLPHVEFAYNR 457
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 134 bits (338), Expect = 1e-29
Identities = 63/91 (69%), Positives = 72/91 (79%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLFF +VRLHGVP TIVSDRD+KF+ HFWRTLW KLGTKLLFST+ +PQTDGQTEV N
Sbjct: 1314 ADLFFREIVRLHGVPNTIVSDRDAKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVN 1373
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTL +L +LK N + WED L +EF NR
Sbjct: 1374 RTLSTMLRAVLKKNIKMWEDCLPHIEFAYNR 1404
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 133 bits (335), Expect = 2e-29
Identities = 63/91 (69%), Positives = 72/91 (79%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLFF +VRLHGVP TIVSDRD+KF+ HFWRTLW KLGTKLLFST+ +PQTDGQTEV N
Sbjct: 1339 ADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVN 1398
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTL +L +LK N + WE+ L VEF NR
Sbjct: 1399 RTLSTMLRAVLKKNIKMWEECLPHVEFAYNR 1429
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 133 bits (335), Expect = 2e-29
Identities = 63/91 (69%), Positives = 72/91 (79%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLFF +VRLHGVP TIVSDRD+KF+ HFWRTLW KLGTKLLFST+ +PQTDGQTEV N
Sbjct: 1339 ADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVN 1398
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTL +L +LK N + WE+ L VEF NR
Sbjct: 1399 RTLSTMLRAVLKKNIKMWEECLPHVEFAYNR 1429
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 133 bits (334), Expect = 3e-29
Identities = 62/91 (68%), Positives = 72/91 (79%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLFF +VRLHGVP TIVSDRD+KF+ HFWRTLW KLGTKLLFST+ +PQTDGQTEV N
Sbjct: 1311 ADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVN 1370
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTL +L +LK N + WE+ L +EF NR
Sbjct: 1371 RTLSTMLRAVLKKNIKMWEECLPHIEFAYNR 1401
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/90 (48%), Positives = 60/90 (66%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
A+L+F +V LHGVP+ IVSDR+S+F HFW+ L +LGT+L FST+Y+PQTDGQTE N
Sbjct: 2133 AELYFARIVSLHGVPKKIVSDRESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 2192
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*N 8
+ L +L + + W+ L EF N
Sbjct: 2193 QILEDMLHACVLDFGKTWDKSLPYAEFSYN 2222
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 132 bits (332), Expect = 5e-29
Identities = 62/91 (68%), Positives = 72/91 (79%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLFF +VRLHGVP TIVSDRD+KF+ HFWRTLW KLGTKLLFST+ +PQTDGQTEV N
Sbjct: 1235 ADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVN 1294
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RT+ +L +LK N + WE+ L VEF NR
Sbjct: 1295 RTVSTMLRAVLKKNIKMWEECLPHVEFAYNR 1325
>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
Length = 821
Score = 132 bits (331), Expect = 6e-29
Identities = 61/91 (67%), Positives = 75/91 (82%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
A+LFF+ +VRLHGVPR+IVSDRD+KF+ HFW+TLWGKLGTKLLFST+ +PQTDGQTEV N
Sbjct: 237 ANLFFKEIVRLHGVPRSIVSDRDAKFLSHFWKTLWGKLGTKLLFSTTCHPQTDGQTEVVN 296
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTL LL +++ N + WE+ L VEF NR
Sbjct: 297 RTLSTLLRAIIQKNLKTWEECLPHVEFAYNR 327
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 132 bits (331), Expect = 6e-29
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLFF +VRLHGVP TIVSDRD+KF+ HFWRTLW KLGTK LFST+ +PQTDGQTEV N
Sbjct: 1339 ADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKFLFSTTCHPQTDGQTEVVN 1398
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTL +L +LK N + WE+ L VEF NR
Sbjct: 1399 RTLSTMLRAVLKKNIKMWEECLPHVEFAYNR 1429
>gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex]
Length = 227
Score = 131 bits (330), Expect = 8e-29
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLFF V+RLHGVP TIVSDRD+KF HFWRTLW KLGTKLLFST+ +PQTDGQTEV N
Sbjct: 127 ADLFFREVIRLHGVPTTIVSDRDAKFPSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVN 186
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTL +L +LK N + WE+ L +EF NR
Sbjct: 187 RTLSTMLRAVLKKNLKMWEECLPHIEFAYNR 217
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 131 bits (330), Expect = 8e-29
Identities = 62/90 (68%), Positives = 71/90 (78%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLFF +VRLHGVP TIVSDRD+KF+ HFWRTLW KLGTKLLFST+ +PQTDGQTEV N
Sbjct: 652 ADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVN 711
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*N 8
RTL +L +LK N + WE+ L VEF N
Sbjct: 712 RTLSTMLRAVLKKNIKMWEECLPHVEFAYN 741
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 131 bits (330), Expect = 8e-29
Identities = 61/90 (67%), Positives = 73/90 (81%)
Frame = -2
Query: 274 DLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTNR 95
DLFF+ VVRLHG+PRTIVSDRD+KF+ HFWR LWGKLGTKLL+ST+ +PQTDGQTEV NR
Sbjct: 1035 DLFFKEVVRLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLYSTACHPQTDGQTEVVNR 1094
Query: 94 TLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
TL LL +++ N + WE+ L VEF NR
Sbjct: 1095 TLTQLLRVVIRKNLKSWEESLPYVEFAYNR 1124
>ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine
max]
Length = 1520
Score = 131 bits (329), Expect = 1e-28
Identities = 60/89 (67%), Positives = 73/89 (82%)
Frame = -2
Query: 271 LFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTNRT 92
LFF+ VVRLHG+PRTIVSDRD+KF+ HFW+TLW KLGTKLLFST+ +PQTDGQTEV NR+
Sbjct: 1360 LFFKEVVRLHGLPRTIVSDRDAKFLSHFWKTLWAKLGTKLLFSTTCHPQTDGQTEVVNRS 1419
Query: 91 LGALLCTMLKANPRRWEDFLSIVEFC*NR 5
L LL +LK N + W+++L VEF NR
Sbjct: 1420 LSTLLRALLKGNHKSWDEYLPHVEFAYNR 1448
>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
Length = 1083
Score = 130 bits (328), Expect = 1e-28
Identities = 59/91 (64%), Positives = 74/91 (81%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
A+LFF+ +VRLHGVPR+IVSDRD+KF+ HFW+ LWGKLGTKLLFST+ +PQ DGQTEV N
Sbjct: 973 ANLFFKEIVRLHGVPRSIVSDRDAKFLSHFWKILWGKLGTKLLFSTTCHPQIDGQTEVVN 1032
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTL LLC +++ N + WE+ L VEF N+
Sbjct: 1033 RTLSTLLCAIIQKNLKTWEECLPHVEFAYNK 1063
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 130 bits (328), Expect = 1e-28
Identities = 61/91 (67%), Positives = 71/91 (78%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
ADLFF +VRLHGVP TIVSDRD+KF+ HFWRTLW KLGTKLLFST+ +PQTDGQ EV N
Sbjct: 1290 ADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQIEVVN 1349
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTL +L +LK N + WE+ L +EF NR
Sbjct: 1350 RTLSTMLRAVLKKNIKMWEECLPHIEFACNR 1380
>gb|AAQ72730.1| putative integrase [Petunia x hybrida]
Length = 437
Score = 129 bits (324), Expect = 4e-28
Identities = 61/91 (67%), Positives = 73/91 (80%)
Frame = -2
Query: 277 ADLFFEHVVRLHGVPRTIVSDRDSKFVGHFWRTLWGKLGTKLLFSTSYYPQTDGQTEVTN 98
A LF E+V++LHGVP+TIVSDRD+KF+ HFWR+LWG LGTKLLFSTS++PQTDGQTEV N
Sbjct: 85 ASLFVENVLKLHGVPQTIVSDRDTKFLSHFWRSLWGALGTKLLFSTSHHPQTDGQTEVVN 144
Query: 97 RTLGALLCTMLKANPRRWEDFLSIVEFC*NR 5
RTLGALL M + W D L ++EF NR
Sbjct: 145 RTLGALLRAMTRGKAGTWIDRLPMMEFAYNR 175