BLASTX nr result
ID: Rheum21_contig00038871
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00038871
(238 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi... 102 5e-20
emb|CBI18516.3| unnamed protein product [Vitis vinifera] 102 5e-20
emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera] 102 5e-20
ref|XP_006370016.1| hypothetical protein POPTR_0001s37740g [Popu... 94 1e-17
ref|XP_002298874.2| hypothetical protein POPTR_0001s37740g [Popu... 94 1e-17
ref|XP_004295188.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_006474877.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
ref|XP_006452610.1| hypothetical protein CICLE_v10007298mg [Citr... 93 4e-17
gb|EMJ08842.1| hypothetical protein PRUPE_ppa021196mg [Prunus pe... 90 4e-16
ref|XP_004487917.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
gb|ESW10437.1| hypothetical protein PHAVU_009G209400g [Phaseolus... 84 3e-14
ref|XP_004252127.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_006597952.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-14
ref|XP_006344896.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
gb|EOY11996.1| Pentatricopeptide repeat (PPR) superfamily protei... 81 1e-13
gb|EOY11995.1| Pentatricopeptide repeat (PPR) superfamily protei... 81 1e-13
ref|XP_002522775.1| pentatricopeptide repeat-containing protein,... 79 5e-13
ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 77 3e-12
ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_006651587.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 102 bits (254), Expect = 5e-20
Identities = 48/79 (60%), Positives = 65/79 (82%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
VL EM+ NG P+ AQ +TL+NGM R+GD+ GA K+K+EM++LG +H++AESAM+RGL+
Sbjct: 1672 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 1731
Query: 182 HRGKIDDALLVLDCMLRMR 238
H GK +DA+LVLD MLRMR
Sbjct: 1732 HCGKTEDAMLVLDHMLRMR 1750
>emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 102 bits (254), Expect = 5e-20
Identities = 48/79 (60%), Positives = 65/79 (82%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
VL EM+ NG P+ AQ +TL+NGM R+GD+ GA K+K+EM++LG +H++AESAM+RGL+
Sbjct: 746 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 805
Query: 182 HRGKIDDALLVLDCMLRMR 238
H GK +DA+LVLD MLRMR
Sbjct: 806 HCGKTEDAMLVLDHMLRMR 824
>emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 102 bits (254), Expect = 5e-20
Identities = 48/79 (60%), Positives = 65/79 (82%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
VL EM+ NG P+ AQ +TL+NGM R+GD+ GA K+K+EM++LG +H++AESAM+RGL+
Sbjct: 921 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 980
Query: 182 HRGKIDDALLVLDCMLRMR 238
H GK +DA+LVLD MLRMR
Sbjct: 981 HCGKTEDAMLVLDHMLRMR 999
>ref|XP_006370016.1| hypothetical protein POPTR_0001s37740g [Populus trichocarpa]
gi|550349126|gb|ERP66585.1| hypothetical protein
POPTR_0001s37740g [Populus trichocarpa]
Length = 1055
Score = 94.4 bits (233), Expect = 1e-17
Identities = 41/79 (51%), Positives = 63/79 (79%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
+L +M+ G TP S Q ++L+NGM R+GD+ GA ++K+EM+++GV + D+AESAM+RGL
Sbjct: 863 LLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLA 922
Query: 182 HRGKIDDALLVLDCMLRMR 238
GK+++A+LVLDCML+ R
Sbjct: 923 QCGKVEEAMLVLDCMLQKR 941
>ref|XP_002298874.2| hypothetical protein POPTR_0001s37740g [Populus trichocarpa]
gi|550349125|gb|EEE83679.2| hypothetical protein
POPTR_0001s37740g [Populus trichocarpa]
Length = 1148
Score = 94.4 bits (233), Expect = 1e-17
Identities = 41/79 (51%), Positives = 63/79 (79%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
+L +M+ G TP S Q ++L+NGM R+GD+ GA ++K+EM+++GV + D+AESAM+RGL
Sbjct: 863 LLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLA 922
Query: 182 HRGKIDDALLVLDCMLRMR 238
GK+++A+LVLDCML+ R
Sbjct: 923 QCGKVEEAMLVLDCMLQKR 941
>ref|XP_004295188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Fragaria vesca subsp. vesca]
Length = 1128
Score = 93.2 bits (230), Expect = 3e-17
Identities = 42/79 (53%), Positives = 63/79 (79%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
+L EM+A GYTP+ T++NGM R+GD+ GA ++K++M++LGV + D+AESAM+RGL
Sbjct: 912 LLYEMLAKGYTPKYTHYFTIINGMCRVGDIKGAFELKDQMEALGVTSRDIAESAMVRGLA 971
Query: 182 HRGKIDDALLVLDCMLRMR 238
GK+++A+LVLD MLRM+
Sbjct: 972 KCGKVEEAMLVLDHMLRMQ 990
>ref|XP_006474877.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Citrus sinensis]
Length = 1137
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/79 (54%), Positives = 62/79 (78%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
VL+ M G TP+ Q +TL+NGM R+G+ GA K+K+EM++LG+ + D+AESAM+RGL
Sbjct: 916 VLRGMAEKGLTPKCTQYITLINGMCRVGNFQGAFKLKDEMEALGISSSDVAESAMVRGLA 975
Query: 182 HRGKIDDALLVLDCMLRMR 238
H GK+++A+LVL+ MLRMR
Sbjct: 976 HCGKVEEAMLVLNRMLRMR 994
>ref|XP_006452610.1| hypothetical protein CICLE_v10007298mg [Citrus clementina]
gi|557555836|gb|ESR65850.1| hypothetical protein
CICLE_v10007298mg [Citrus clementina]
Length = 1084
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/79 (54%), Positives = 62/79 (78%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
VL+ M G TP+ Q +TL+NGM R+G+ GA K+K+EM++LG+ + D+AESAM+RGL
Sbjct: 863 VLRGMAEKGLTPKCTQYITLINGMCRVGNFQGAFKLKDEMEALGISSSDVAESAMVRGLA 922
Query: 182 HRGKIDDALLVLDCMLRMR 238
H GK+++A+LVL+ MLRMR
Sbjct: 923 HCGKVEEAMLVLNRMLRMR 941
>gb|EMJ08842.1| hypothetical protein PRUPE_ppa021196mg [Prunus persica]
Length = 1064
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/79 (51%), Positives = 61/79 (77%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
+L EM+ G+TP+ TL+NGM R+GD+ GA ++K+ +++LGV T D+AESA++RGL
Sbjct: 863 LLYEMLEKGFTPKDTHYFTLINGMCRVGDIQGAFELKDHIEALGVTTSDIAESALVRGLA 922
Query: 182 HRGKIDDALLVLDCMLRMR 238
GKI++A+LVLD MLRM+
Sbjct: 923 KCGKIEEAMLVLDRMLRMK 941
>ref|XP_004487917.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
isoform X1 [Cicer arietinum]
gi|502085442|ref|XP_004487918.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g55840-like isoform X2 [Cicer arietinum]
gi|502085446|ref|XP_004487919.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g55840-like isoform X3 [Cicer arietinum]
gi|502085449|ref|XP_004487920.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g55840-like isoform X4 [Cicer arietinum]
gi|502085454|ref|XP_004487921.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g55840-like isoform X5 [Cicer arietinum]
Length = 1086
Score = 84.7 bits (208), Expect = 1e-14
Identities = 38/79 (48%), Positives = 58/79 (73%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
+LQ ++ NGY P Q +TL+NGM R+G++ GA+K+++EMK+LGV + +A SA+IRGL
Sbjct: 867 ILQALLENGYAPTCKQFITLINGMCRIGNIKGAMKLQDEMKTLGVSSESVAMSAIIRGLA 926
Query: 182 HRGKIDDALLVLDCMLRMR 238
K DDA+ +LD +L M+
Sbjct: 927 RSRKTDDAIRILDIVLEMQ 945
>gb|ESW10437.1| hypothetical protein PHAVU_009G209400g [Phaseolus vulgaris]
Length = 1054
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/79 (51%), Positives = 58/79 (73%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
VLQ ++ +G P S Q +TL+NGM RLG++ GALKV++EMK+ GV +H +A SA +RGL
Sbjct: 867 VLQALLESGSVPTSKQYITLINGMCRLGNIKGALKVQDEMKTHGVSSHYVAMSATVRGLA 926
Query: 182 HRGKIDDALLVLDCMLRMR 238
H K ++A+ VLD ML M+
Sbjct: 927 HSKKTENAIWVLDLMLEMQ 945
>ref|XP_004252127.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Solanum lycopersicum]
Length = 1121
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/78 (48%), Positives = 57/78 (73%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
+L +M+ G+ P Q L+ M ++GDV GA K+K+EM+ LGV + +AE A+IRGLV
Sbjct: 905 LLHKMIEEGFVPVDRQYCNLITSMCKVGDVKGAFKLKDEMELLGVSSRTIAEGAIIRGLV 964
Query: 182 HRGKIDDALLVLDCMLRM 235
RGK+++A+LVL+CMLR+
Sbjct: 965 RRGKMEEAMLVLECMLRV 982
>ref|XP_006597952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
isoform X1 [Glycine max] gi|571520191|ref|XP_006597953.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like isoform X2 [Glycine max]
gi|571520195|ref|XP_006597954.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g55840-like isoform X3 [Glycine max]
gi|571520199|ref|XP_006597955.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g55840-like isoform X4 [Glycine max]
gi|571520201|ref|XP_006597956.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g55840-like isoform X5 [Glycine max]
gi|571520205|ref|XP_006597957.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g55840-like isoform X6 [Glycine max]
Length = 1086
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/79 (46%), Positives = 62/79 (78%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
VLQ ++ +G P + Q +TL+NGM R+G++ GA+K+++EMK+LG+ +H++A SA++RGL
Sbjct: 867 VLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLA 926
Query: 182 HRGKIDDALLVLDCMLRMR 238
+ KI++A+ VLD ML M+
Sbjct: 927 NSKKIENAIWVLDLMLEMQ 945
>ref|XP_006344896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Solanum tuberosum]
Length = 1112
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/78 (48%), Positives = 57/78 (73%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
+L +M+ G+ P Q L+ M ++GDV GA K+K+EM+ LGV + +AE A+IRGLV
Sbjct: 896 LLHKMIEEGFVPVDRQYCNLITSMCKVGDVKGAFKLKDEMELLGVSSRTIAEGAIIRGLV 955
Query: 182 HRGKIDDALLVLDCMLRM 235
RGK+++A+LVL+CMLR+
Sbjct: 956 LRGKMEEAMLVLECMLRV 973
>gb|EOY11996.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
2 [Theobroma cacao] gi|508720100|gb|EOY11997.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 2 [Theobroma cacao]
gi|508720101|gb|EOY11998.1| Pentatricopeptide repeat
(PPR) superfamily protein, putative isoform 2 [Theobroma
cacao]
Length = 1025
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/79 (48%), Positives = 58/79 (73%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
+L E+ NG+ P+ Q +TL+N M R+G++ A +K+EM SL + + D+AESA++RGL
Sbjct: 808 ILHELAQNGFLPKGKQYITLINAMCRVGNMRTAFDLKDEMASLDITSCDVAESAIVRGLA 867
Query: 182 HRGKIDDALLVLDCMLRMR 238
GK+++A+LVLD MLRMR
Sbjct: 868 LCGKVEEAMLVLDNMLRMR 886
>gb|EOY11995.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
1 [Theobroma cacao]
Length = 1173
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/79 (48%), Positives = 58/79 (73%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
+L E+ NG+ P+ Q +TL+N M R+G++ A +K+EM SL + + D+AESA++RGL
Sbjct: 912 ILHELAQNGFLPKGKQYITLINAMCRVGNMRTAFDLKDEMASLDITSCDVAESAIVRGLA 971
Query: 182 HRGKIDDALLVLDCMLRMR 238
GK+++A+LVLD MLRMR
Sbjct: 972 LCGKVEEAMLVLDNMLRMR 990
>ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538013|gb|EEF39626.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1071
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/77 (48%), Positives = 56/77 (72%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
+L EM+ G P+ Q + L+N M R+G + GA K+K+EM++LG+ + D+AESA++RGL
Sbjct: 857 LLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLA 916
Query: 182 HRGKIDDALLVLDCMLR 232
GK+++A LVLD MLR
Sbjct: 917 KCGKVEEAKLVLDFMLR 933
>ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +2
Query: 5 LQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLVH 184
+ EM+ G+ P S Q T+M M R+GD+ GA K+K++M +LG+ D AE AM+RGL
Sbjct: 864 MHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLAL 923
Query: 185 RGKIDDALLVLDCMLRMR 238
GKI++A+ +L MLRM+
Sbjct: 924 CGKIEEAMWILQRMLRMK 941
>ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Cucumis sativus]
Length = 1079
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +2
Query: 5 LQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLVH 184
+ EM+ G+ P S Q T+M M R+GD+ GA K+K++M +LG+ D AE AM+RGL
Sbjct: 864 MHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLAL 923
Query: 185 RGKIDDALLVLDCMLRMR 238
GKI++A+ +L MLRM+
Sbjct: 924 CGKIEEAMWILQRMLRMK 941
>ref|XP_006651587.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Oryza brachyantha]
Length = 1027
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/77 (41%), Positives = 55/77 (71%)
Frame = +2
Query: 2 VLQEMVANGYTPESAQIVTLMNGMLRLGDVAGALKVKEEMKSLGVMTHDLAESAMIRGLV 181
+L EMV +G P+ + L+N R+GD+ GA ++KEEMK+LGV+ ++AES+++RGL
Sbjct: 794 ILHEMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEEMKALGVVPSEVAESSIVRGLC 853
Query: 182 HRGKIDDALLVLDCMLR 232
GK+++A++V ++R
Sbjct: 854 RCGKVEEAIIVFSSIMR 870