BLASTX nr result

ID: Rheum21_contig00038819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00038819
         (372 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006421782.1| hypothetical protein CICLE_v10004643mg [Citr...   136   2e-30
gb|EXC20880.1| hypothetical protein L484_012956 [Morus notabilis]     136   3e-30
gb|EOY23000.1| Tetratricopeptide repeat-like superfamily protein...   133   2e-29
gb|EOY22999.1| Tetratricopeptide repeat-like superfamily protein...   133   2e-29
ref|XP_004309259.1| PREDICTED: pentatricopeptide repeat-containi...   125   6e-27
gb|EOY23006.1| Cytochrome P450 704C1 [Theobroma cacao]                124   1e-26
gb|ESW24714.1| hypothetical protein PHAVU_004G153700g [Phaseolus...   124   2e-26
ref|XP_006348045.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_004506294.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_004234271.1| PREDICTED: pentatricopeptide repeat-containi...   118   9e-25
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t...   115   5e-24
ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi...   115   6e-24
gb|AEP33767.1| organelle transcript processing 82, partial [Matt...    94   2e-17
gb|AEP33762.1| organelle transcript processing 82, partial [Hesp...    91   2e-16
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps...    89   6e-16
ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [S...    89   6e-16
gb|AEP33773.1| organelle transcript processing 82, partial [Lobu...    89   8e-16
gb|AEP33758.1| organelle transcript processing 82, partial [Barb...    89   8e-16
ref|XP_006643820.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_004986593.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15

>ref|XP_006421782.1| hypothetical protein CICLE_v10004643mg [Citrus clementina]
           gi|568874334|ref|XP_006490271.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
           gi|557523655|gb|ESR35022.1| hypothetical protein
           CICLE_v10004643mg [Citrus clementina]
          Length = 569

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/84 (72%), Positives = 74/84 (88%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQMHGN +LGEKVA  LI+LDP N+AFYVNLCD+YAKAGRF DVKK R LM+E G++
Sbjct: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508

Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
           KEVPGCS +E+DG+V EFS++G+P
Sbjct: 509 KEVPGCSSVEVDGVVHEFSMKGSP 532


>gb|EXC20880.1| hypothetical protein L484_012956 [Morus notabilis]
          Length = 540

 Score =  136 bits (342), Expect = 3e-30
 Identities = 62/84 (73%), Positives = 74/84 (88%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQMHG  +LGE+VA  LI L+P N+AFYVNLCD+YAK+GRF+DVK+IR LM+E G+K
Sbjct: 435 LGGCQMHGKVELGERVAKYLISLEPLNHAFYVNLCDIYAKSGRFEDVKRIRTLMKERGIK 494

Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
           KEV GCSMIEIDG+V EFSVRG+P
Sbjct: 495 KEVAGCSMIEIDGVVHEFSVRGSP 518


>gb|EOY23000.1| Tetratricopeptide repeat-like superfamily protein isoform 2
           [Theobroma cacao] gi|508775745|gb|EOY23001.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 2 [Theobroma cacao]
          Length = 370

 Score =  133 bits (335), Expect = 2e-29
 Identities = 59/84 (70%), Positives = 74/84 (88%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQ+HGN +LGE+VA  LI+L+P N+AFY+NLCD+YAKAGRF DVK+IRALM+E G++
Sbjct: 251 LGGCQIHGNIELGERVAQYLIDLEPMNHAFYINLCDIYAKAGRFDDVKRIRALMKERGIR 310

Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
           KEV GCSMIE+DG V EFS++G P
Sbjct: 311 KEVAGCSMIEVDGFVLEFSIKGCP 334


>gb|EOY22999.1| Tetratricopeptide repeat-like superfamily protein isoform 1
           [Theobroma cacao]
          Length = 467

 Score =  133 bits (335), Expect = 2e-29
 Identities = 59/84 (70%), Positives = 74/84 (88%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQ+HGN +LGE+VA  LI+L+P N+AFY+NLCD+YAKAGRF DVK+IRALM+E G++
Sbjct: 348 LGGCQIHGNIELGERVAQYLIDLEPMNHAFYINLCDIYAKAGRFDDVKRIRALMKERGIR 407

Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
           KEV GCSMIE+DG V EFS++G P
Sbjct: 408 KEVAGCSMIEVDGFVLEFSIKGCP 431


>ref|XP_004309259.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Fragaria vesca subsp. vesca]
          Length = 511

 Score =  125 bits (314), Expect = 6e-27
 Identities = 54/83 (65%), Positives = 71/83 (85%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQ+HG  ++GE  A +LI+++P N+AFYVNLCD+YAK GRF DVK +++LM+E G+K
Sbjct: 425 LGGCQIHGQVEIGEMAAHRLIDMEPLNHAFYVNLCDIYAKTGRFNDVKTVKSLMKERGIK 484

Query: 181 KEVPGCSMIEIDGIVQEFSVRGA 249
           KEV GCSMIE+DG+V EFSVRG+
Sbjct: 485 KEVAGCSMIEVDGVVLEFSVRGS 507


>gb|EOY23006.1| Cytochrome P450 704C1 [Theobroma cacao]
          Length = 768

 Score =  124 bits (312), Expect = 1e-26
 Identities = 56/84 (66%), Positives = 72/84 (85%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQ+HGN +LGE+VA  LI+L+P N+AFY++LCD+YAKAGRF DVK+IRALM+E G++
Sbjct: 189 LGGCQIHGNIELGERVAQYLIDLEPMNHAFYIDLCDIYAKAGRFDDVKRIRALMKERGIR 248

Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
           KEV GC MIE+D  V EFS++G P
Sbjct: 249 KEVAGCRMIEVDEFVLEFSLKGWP 272


>gb|ESW24714.1| hypothetical protein PHAVU_004G153700g [Phaseolus vulgaris]
          Length = 542

 Score =  124 bits (310), Expect = 2e-26
 Identities = 57/83 (68%), Positives = 70/83 (84%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQMHGN +LGEKVAL LI+L+P N+AFYVNLCD+YAKAGRF   K+IR  M+E  ++
Sbjct: 439 LGGCQMHGNVELGEKVALHLIDLEPHNHAFYVNLCDIYAKAGRFGAAKRIRIFMKERDIE 498

Query: 181 KEVPGCSMIEIDGIVQEFSVRGA 249
           K++PGCSMIEI+G VQEFS  G+
Sbjct: 499 KKIPGCSMIEINGEVQEFSAGGS 521


>ref|XP_006348045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum tuberosum]
          Length = 539

 Score =  122 bits (306), Expect = 5e-26
 Identities = 58/84 (69%), Positives = 70/84 (83%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQMH N  LGEKVA  LI ++P N+AFYVNLCD+YAKA RF  VK+IRALM+E  ++
Sbjct: 427 LGGCQMHRNFQLGEKVARYLIAIEPLNHAFYVNLCDIYAKARRFDHVKEIRALMKEKEIE 486

Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
           K VPGCSMIE++G+V EFSVRG+P
Sbjct: 487 KTVPGCSMIEVNGVVCEFSVRGSP 510


>ref|XP_004506294.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cicer arietinum]
          Length = 541

 Score =  122 bits (306), Expect = 5e-26
 Identities = 56/83 (67%), Positives = 71/83 (85%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQMHGN +LGEKVA +LI+L+P N+AFY+NLCD+YAKAGRF   K+IR LM+E  ++
Sbjct: 438 LGGCQMHGNIELGEKVAHRLIDLEPHNHAFYMNLCDIYAKAGRFDAAKRIRNLMKERRIE 497

Query: 181 KEVPGCSMIEIDGIVQEFSVRGA 249
            +VPGCSMIEI+G+VQEFS  G+
Sbjct: 498 TKVPGCSMIEINGVVQEFSAGGS 520


>ref|XP_004234271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum lycopersicum]
          Length = 551

 Score =  118 bits (295), Expect = 9e-25
 Identities = 57/83 (68%), Positives = 68/83 (81%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQMH N  LGEKVA  LI L+P N+AFYVNLCD+YAKA RF  VK+IRALM+E  ++
Sbjct: 439 LGGCQMHQNFQLGEKVARYLIALEPLNHAFYVNLCDIYAKARRFDHVKEIRALMKEKEIE 498

Query: 181 KEVPGCSMIEIDGIVQEFSVRGA 249
           K VPGCS IE++G+V EFSVRG+
Sbjct: 499 KTVPGCSAIEVNGVVCEFSVRGS 521


>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 541

 Score =  115 bits (289), Expect = 5e-24
 Identities = 52/84 (61%), Positives = 68/84 (80%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQMHGN  LGEKVA  LI+L+P N+AFY+NLCD+Y KAG++   K+IR  M+E G++
Sbjct: 441 LGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIE 500

Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
            ++PGCS+IEI+G+VQEFSV   P
Sbjct: 501 TKIPGCSIIEINGVVQEFSVGEIP 524


>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 540

 Score =  115 bits (288), Expect = 6e-24
 Identities = 53/83 (63%), Positives = 67/83 (80%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           LGGCQMHGN +LGEKV   LI+L+P N+AFYVN CD+YAKAG F   K+IR +M+E  ++
Sbjct: 437 LGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKRIE 496

Query: 181 KEVPGCSMIEIDGIVQEFSVRGA 249
           K++PGCSMIEI+G VQEFS  G+
Sbjct: 497 KKIPGCSMIEINGEVQEFSAGGS 519


>gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 44/80 (55%), Positives = 59/80 (73%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           L  C++HGN +LGE  A KLI+++P N   YV L ++YA AGR+ +V KIRAL+ + GMK
Sbjct: 503 LKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMK 562

Query: 181 KEVPGCSMIEIDGIVQEFSV 240
           K+VPGCS IEID +V EF +
Sbjct: 563 KKVPGCSSIEIDSVVHEFII 582


>gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/80 (52%), Positives = 58/80 (72%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           L  C++HGN +LGE  A KLI+++P N   YV L ++YA AG++ +V KIR L+ + GMK
Sbjct: 489 LKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMK 548

Query: 181 KEVPGCSMIEIDGIVQEFSV 240
           K+VPGCS IEID +V EF +
Sbjct: 549 KKVPGCSSIEIDSVVHEFII 568


>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
           gi|482575565|gb|EOA39752.1| hypothetical protein
           CARUB_v10008399mg [Capsella rubella]
          Length = 740

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 44/80 (55%), Positives = 57/80 (71%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           L  C+MHGN +LGE  A  LI+++P N   YV L ++YA AGR+ +V KIRAL+ + GMK
Sbjct: 544 LKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKIRALLNDKGMK 603

Query: 181 KEVPGCSMIEIDGIVQEFSV 240
           K VPGCS IEID +V EF +
Sbjct: 604 K-VPGCSSIEIDSVVHEFII 622


>ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
           gi|241927061|gb|EES00206.1| hypothetical protein
           SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 40/78 (51%), Positives = 60/78 (76%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           L  C++HGN+++GE VA +L+ELDP N   Y+ L ++YAK  R++DV+++R  + E G+K
Sbjct: 431 LAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIK 490

Query: 181 KEVPGCSMIEIDGIVQEF 234
           KE PGCS+IE+DGI+ EF
Sbjct: 491 KE-PGCSLIEMDGIIHEF 507


>gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/80 (55%), Positives = 57/80 (71%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           L  C+MHGN +LGE  A  LI+++P N   YV L ++YA AGR+ +V KIRAL+ + GMK
Sbjct: 499 LKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMK 558

Query: 181 KEVPGCSMIEIDGIVQEFSV 240
           K VPGCS IEID +V EF +
Sbjct: 559 K-VPGCSSIEIDSVVHEFII 577


>gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/80 (55%), Positives = 57/80 (71%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           L  C+MHGN +LGE  A KLI+++P N   YV L ++YA AGR+ +V  IRAL+ + GMK
Sbjct: 514 LKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMK 573

Query: 181 KEVPGCSMIEIDGIVQEFSV 240
           K VPGCS IEID +V EF +
Sbjct: 574 K-VPGCSSIEIDSVVHEFII 592


>ref|XP_006643820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Oryza brachyantha]
          Length = 659

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/78 (51%), Positives = 60/78 (76%)
 Frame = +1

Query: 1   LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
           L  C++HGN+++GE  A  L+ELDP+N   Y+ L ++YAK+ R++DV++IR  + E G+K
Sbjct: 463 LAACRIHGNSEIGELAAEHLLELDPYNSTAYILLSNMYAKSNRWEDVQRIRQAIMEKGIK 522

Query: 181 KEVPGCSMIEIDGIVQEF 234
           KE PGCSMIEI+G++ EF
Sbjct: 523 KE-PGCSMIEINGMIYEF 539


>ref|XP_004986593.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Setaria italica]
          Length = 645

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/78 (52%), Positives = 58/78 (74%)
 Frame = +1

Query: 10  CQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMKKEV 189
           C+MHGN  LGEK A+KL+ELDP +   YV L ++YA+A   K   K+RA+M+ +G++K V
Sbjct: 533 CRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEK-V 591

Query: 190 PGCSMIEIDGIVQEFSVR 243
           PGCS IE++G+V EF V+
Sbjct: 592 PGCSCIELNGVVHEFVVK 609


Top