BLASTX nr result
ID: Rheum21_contig00038819
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00038819
(372 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006421782.1| hypothetical protein CICLE_v10004643mg [Citr... 136 2e-30
gb|EXC20880.1| hypothetical protein L484_012956 [Morus notabilis] 136 3e-30
gb|EOY23000.1| Tetratricopeptide repeat-like superfamily protein... 133 2e-29
gb|EOY22999.1| Tetratricopeptide repeat-like superfamily protein... 133 2e-29
ref|XP_004309259.1| PREDICTED: pentatricopeptide repeat-containi... 125 6e-27
gb|EOY23006.1| Cytochrome P450 704C1 [Theobroma cacao] 124 1e-26
gb|ESW24714.1| hypothetical protein PHAVU_004G153700g [Phaseolus... 124 2e-26
ref|XP_006348045.1| PREDICTED: pentatricopeptide repeat-containi... 122 5e-26
ref|XP_004506294.1| PREDICTED: pentatricopeptide repeat-containi... 122 5e-26
ref|XP_004234271.1| PREDICTED: pentatricopeptide repeat-containi... 118 9e-25
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t... 115 5e-24
ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi... 115 6e-24
gb|AEP33767.1| organelle transcript processing 82, partial [Matt... 94 2e-17
gb|AEP33762.1| organelle transcript processing 82, partial [Hesp... 91 2e-16
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps... 89 6e-16
ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [S... 89 6e-16
gb|AEP33773.1| organelle transcript processing 82, partial [Lobu... 89 8e-16
gb|AEP33758.1| organelle transcript processing 82, partial [Barb... 89 8e-16
ref|XP_006643820.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_004986593.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
>ref|XP_006421782.1| hypothetical protein CICLE_v10004643mg [Citrus clementina]
gi|568874334|ref|XP_006490271.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
gi|557523655|gb|ESR35022.1| hypothetical protein
CICLE_v10004643mg [Citrus clementina]
Length = 569
Score = 136 bits (343), Expect = 2e-30
Identities = 61/84 (72%), Positives = 74/84 (88%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQMHGN +LGEKVA LI+LDP N+AFYVNLCD+YAKAGRF DVKK R LM+E G++
Sbjct: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
KEVPGCS +E+DG+V EFS++G+P
Sbjct: 509 KEVPGCSSVEVDGVVHEFSMKGSP 532
>gb|EXC20880.1| hypothetical protein L484_012956 [Morus notabilis]
Length = 540
Score = 136 bits (342), Expect = 3e-30
Identities = 62/84 (73%), Positives = 74/84 (88%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQMHG +LGE+VA LI L+P N+AFYVNLCD+YAK+GRF+DVK+IR LM+E G+K
Sbjct: 435 LGGCQMHGKVELGERVAKYLISLEPLNHAFYVNLCDIYAKSGRFEDVKRIRTLMKERGIK 494
Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
KEV GCSMIEIDG+V EFSVRG+P
Sbjct: 495 KEVAGCSMIEIDGVVHEFSVRGSP 518
>gb|EOY23000.1| Tetratricopeptide repeat-like superfamily protein isoform 2
[Theobroma cacao] gi|508775745|gb|EOY23001.1|
Tetratricopeptide repeat-like superfamily protein
isoform 2 [Theobroma cacao]
Length = 370
Score = 133 bits (335), Expect = 2e-29
Identities = 59/84 (70%), Positives = 74/84 (88%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQ+HGN +LGE+VA LI+L+P N+AFY+NLCD+YAKAGRF DVK+IRALM+E G++
Sbjct: 251 LGGCQIHGNIELGERVAQYLIDLEPMNHAFYINLCDIYAKAGRFDDVKRIRALMKERGIR 310
Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
KEV GCSMIE+DG V EFS++G P
Sbjct: 311 KEVAGCSMIEVDGFVLEFSIKGCP 334
>gb|EOY22999.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 467
Score = 133 bits (335), Expect = 2e-29
Identities = 59/84 (70%), Positives = 74/84 (88%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQ+HGN +LGE+VA LI+L+P N+AFY+NLCD+YAKAGRF DVK+IRALM+E G++
Sbjct: 348 LGGCQIHGNIELGERVAQYLIDLEPMNHAFYINLCDIYAKAGRFDDVKRIRALMKERGIR 407
Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
KEV GCSMIE+DG V EFS++G P
Sbjct: 408 KEVAGCSMIEVDGFVLEFSIKGCP 431
>ref|XP_004309259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Fragaria vesca subsp. vesca]
Length = 511
Score = 125 bits (314), Expect = 6e-27
Identities = 54/83 (65%), Positives = 71/83 (85%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQ+HG ++GE A +LI+++P N+AFYVNLCD+YAK GRF DVK +++LM+E G+K
Sbjct: 425 LGGCQIHGQVEIGEMAAHRLIDMEPLNHAFYVNLCDIYAKTGRFNDVKTVKSLMKERGIK 484
Query: 181 KEVPGCSMIEIDGIVQEFSVRGA 249
KEV GCSMIE+DG+V EFSVRG+
Sbjct: 485 KEVAGCSMIEVDGVVLEFSVRGS 507
>gb|EOY23006.1| Cytochrome P450 704C1 [Theobroma cacao]
Length = 768
Score = 124 bits (312), Expect = 1e-26
Identities = 56/84 (66%), Positives = 72/84 (85%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQ+HGN +LGE+VA LI+L+P N+AFY++LCD+YAKAGRF DVK+IRALM+E G++
Sbjct: 189 LGGCQIHGNIELGERVAQYLIDLEPMNHAFYIDLCDIYAKAGRFDDVKRIRALMKERGIR 248
Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
KEV GC MIE+D V EFS++G P
Sbjct: 249 KEVAGCRMIEVDEFVLEFSLKGWP 272
>gb|ESW24714.1| hypothetical protein PHAVU_004G153700g [Phaseolus vulgaris]
Length = 542
Score = 124 bits (310), Expect = 2e-26
Identities = 57/83 (68%), Positives = 70/83 (84%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQMHGN +LGEKVAL LI+L+P N+AFYVNLCD+YAKAGRF K+IR M+E ++
Sbjct: 439 LGGCQMHGNVELGEKVALHLIDLEPHNHAFYVNLCDIYAKAGRFGAAKRIRIFMKERDIE 498
Query: 181 KEVPGCSMIEIDGIVQEFSVRGA 249
K++PGCSMIEI+G VQEFS G+
Sbjct: 499 KKIPGCSMIEINGEVQEFSAGGS 521
>ref|XP_006348045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum tuberosum]
Length = 539
Score = 122 bits (306), Expect = 5e-26
Identities = 58/84 (69%), Positives = 70/84 (83%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQMH N LGEKVA LI ++P N+AFYVNLCD+YAKA RF VK+IRALM+E ++
Sbjct: 427 LGGCQMHRNFQLGEKVARYLIAIEPLNHAFYVNLCDIYAKARRFDHVKEIRALMKEKEIE 486
Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
K VPGCSMIE++G+V EFSVRG+P
Sbjct: 487 KTVPGCSMIEVNGVVCEFSVRGSP 510
>ref|XP_004506294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cicer arietinum]
Length = 541
Score = 122 bits (306), Expect = 5e-26
Identities = 56/83 (67%), Positives = 71/83 (85%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQMHGN +LGEKVA +LI+L+P N+AFY+NLCD+YAKAGRF K+IR LM+E ++
Sbjct: 438 LGGCQMHGNIELGEKVAHRLIDLEPHNHAFYMNLCDIYAKAGRFDAAKRIRNLMKERRIE 497
Query: 181 KEVPGCSMIEIDGIVQEFSVRGA 249
+VPGCSMIEI+G+VQEFS G+
Sbjct: 498 TKVPGCSMIEINGVVQEFSAGGS 520
>ref|XP_004234271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum lycopersicum]
Length = 551
Score = 118 bits (295), Expect = 9e-25
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQMH N LGEKVA LI L+P N+AFYVNLCD+YAKA RF VK+IRALM+E ++
Sbjct: 439 LGGCQMHQNFQLGEKVARYLIALEPLNHAFYVNLCDIYAKARRFDHVKEIRALMKEKEIE 498
Query: 181 KEVPGCSMIEIDGIVQEFSVRGA 249
K VPGCS IE++G+V EFSVRG+
Sbjct: 499 KTVPGCSAIEVNGVVCEFSVRGS 521
>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 541
Score = 115 bits (289), Expect = 5e-24
Identities = 52/84 (61%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQMHGN LGEKVA LI+L+P N+AFY+NLCD+Y KAG++ K+IR M+E G++
Sbjct: 441 LGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIE 500
Query: 181 KEVPGCSMIEIDGIVQEFSVRGAP 252
++PGCS+IEI+G+VQEFSV P
Sbjct: 501 TKIPGCSIIEINGVVQEFSVGEIP 524
>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 115 bits (288), Expect = 6e-24
Identities = 53/83 (63%), Positives = 67/83 (80%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
LGGCQMHGN +LGEKV LI+L+P N+AFYVN CD+YAKAG F K+IR +M+E ++
Sbjct: 437 LGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKRIE 496
Query: 181 KEVPGCSMIEIDGIVQEFSVRGA 249
K++PGCSMIEI+G VQEFS G+
Sbjct: 497 KKIPGCSMIEINGEVQEFSAGGS 519
>gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
L C++HGN +LGE A KLI+++P N YV L ++YA AGR+ +V KIRAL+ + GMK
Sbjct: 503 LKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMK 562
Query: 181 KEVPGCSMIEIDGIVQEFSV 240
K+VPGCS IEID +V EF +
Sbjct: 563 KKVPGCSSIEIDSVVHEFII 582
>gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/80 (52%), Positives = 58/80 (72%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
L C++HGN +LGE A KLI+++P N YV L ++YA AG++ +V KIR L+ + GMK
Sbjct: 489 LKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMK 548
Query: 181 KEVPGCSMIEIDGIVQEFSV 240
K+VPGCS IEID +V EF +
Sbjct: 549 KKVPGCSSIEIDSVVHEFII 568
>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
gi|482575565|gb|EOA39752.1| hypothetical protein
CARUB_v10008399mg [Capsella rubella]
Length = 740
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
L C+MHGN +LGE A LI+++P N YV L ++YA AGR+ +V KIRAL+ + GMK
Sbjct: 544 LKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKIRALLNDKGMK 603
Query: 181 KEVPGCSMIEIDGIVQEFSV 240
K VPGCS IEID +V EF +
Sbjct: 604 K-VPGCSSIEIDSVVHEFII 622
>ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein
SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/78 (51%), Positives = 60/78 (76%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
L C++HGN+++GE VA +L+ELDP N Y+ L ++YAK R++DV+++R + E G+K
Sbjct: 431 LAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIK 490
Query: 181 KEVPGCSMIEIDGIVQEF 234
KE PGCS+IE+DGI+ EF
Sbjct: 491 KE-PGCSLIEMDGIIHEF 507
>gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
L C+MHGN +LGE A LI+++P N YV L ++YA AGR+ +V KIRAL+ + GMK
Sbjct: 499 LKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMK 558
Query: 181 KEVPGCSMIEIDGIVQEFSV 240
K VPGCS IEID +V EF +
Sbjct: 559 K-VPGCSSIEIDSVVHEFII 577
>gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
L C+MHGN +LGE A KLI+++P N YV L ++YA AGR+ +V IRAL+ + GMK
Sbjct: 514 LKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMK 573
Query: 181 KEVPGCSMIEIDGIVQEFSV 240
K VPGCS IEID +V EF +
Sbjct: 574 K-VPGCSSIEIDSVVHEFII 592
>ref|XP_006643820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Oryza brachyantha]
Length = 659
Score = 87.8 bits (216), Expect = 1e-15
Identities = 40/78 (51%), Positives = 60/78 (76%)
Frame = +1
Query: 1 LGGCQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMK 180
L C++HGN+++GE A L+ELDP+N Y+ L ++YAK+ R++DV++IR + E G+K
Sbjct: 463 LAACRIHGNSEIGELAAEHLLELDPYNSTAYILLSNMYAKSNRWEDVQRIRQAIMEKGIK 522
Query: 181 KEVPGCSMIEIDGIVQEF 234
KE PGCSMIEI+G++ EF
Sbjct: 523 KE-PGCSMIEINGMIYEF 539
>ref|XP_004986593.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Setaria italica]
Length = 645
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/78 (52%), Positives = 58/78 (74%)
Frame = +1
Query: 10 CQMHGNTDLGEKVALKLIELDPFNYAFYVNLCDVYAKAGRFKDVKKIRALMQEIGMKKEV 189
C+MHGN LGEK A+KL+ELDP + YV L ++YA+A K K+RA+M+ +G++K V
Sbjct: 533 CRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEK-V 591
Query: 190 PGCSMIEIDGIVQEFSVR 243
PGCS IE++G+V EF V+
Sbjct: 592 PGCSCIELNGVVHEFVVK 609