BLASTX nr result
ID: Rheum21_contig00038811
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00038811
(351 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 63 1e-15
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript... 63 7e-14
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 60 1e-11
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 60 1e-11
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 60 1e-11
ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus... 55 1e-10
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624... 52 1e-10
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 63 2e-10
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn... 60 1e-09
ref|XP_004292397.1| PREDICTED: uncharacterized protein LOC101292... 44 4e-09
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea] 49 5e-09
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 63 4e-08
ref|XP_002520539.1| protein binding protein, putative [Ricinus c... 62 8e-08
gb|ABO80460.1| RNA-directed DNA polymerase ; Ribonuclease H, put... 39 5e-06
emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera] 39 6e-06
gb|ABA95978.2| retrotransposon protein, putative, unclassified [... 55 1e-05
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 62.8 bits (151), Expect(2) = 1e-15
Identities = 30/53 (56%), Positives = 35/53 (66%)
Frame = -1
Query: 159 LLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
LL E L KE D++LHQE+ LWFQKSR L GDRNT F+H V+R R N
Sbjct: 129 LLMKEDTLLKEFDVLLHQEETLWFQKSREKLLALGDRNTTFFHTSTVIRRRRN 181
Score = 45.4 bits (106), Expect(2) = 1e-15
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = -3
Query: 349 FKEVISSSWNGRASLSISLSHLSTGLLEWNKCVFGNIFFRKRKLWARLESAR 194
FKE++++SW+ S ++L+ L L +WNK VFGNI RK K+ + L++ +
Sbjct: 67 FKELLTASWDTGLSTPVALNRLRWQLKKWNKEVFGNIHVRKEKVVSDLKAVQ 118
>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 855
Score = 62.8 bits (151), Expect(2) = 7e-14
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -1
Query: 159 LLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
LL E L KE D+VL QE++LWFQKSR ++ GDRNT+++H VVR R N
Sbjct: 731 LLSKEEELIKEFDVVLEQEEVLWFQKSREKWVELGDRNTKYFHTMTVVRRRRN 783
Score = 39.7 bits (91), Expect(2) = 7e-14
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = -3
Query: 349 FKEVISSSWNGRASLSISLSHLSTGLLEWNKCVFGNIFFRKRKLWARLESARRKL 185
FK+++ +SWN ++L+ L + L +WN+ VFG++ RK L ++ + L
Sbjct: 669 FKDLLQASWNTEGETPVALAALKSKLKKWNREVFGDVNRRKESLMNEIKVVQELL 723
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 60.5 bits (145), Expect(2) = 1e-11
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = -1
Query: 168 NVRLLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
+VRL DLE L EL+ VL QE+ LWFQK+R+ ++ +GDRNT FYH +++ N
Sbjct: 848 SVRLQDLEKRLLSELNEVLVQEETLWFQKARTDWIRNGDRNTTFYHRSALIKRNRN 903
Score = 34.7 bits (78), Expect(2) = 1e-11
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -3
Query: 271 LEWNKCVFGNIFFRKRKLWARLESARRKLAYAPSQR 164
L WN+ VFGNIF RKRK+ R+ +R Y S R
Sbjct: 815 LLWNRNVFGNIFNRKRKIENRILGIQRAWNYNTSVR 850
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 60.5 bits (145), Expect(2) = 1e-11
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = -1
Query: 168 NVRLLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
+VRL DLE L EL+ VL QE+ LWFQK+R+ ++ +GDRNT FYH +++ N
Sbjct: 316 SVRLQDLEKRLLSELNEVLVQEETLWFQKARTDWIRNGDRNTTFYHRSALIKRNRN 371
Score = 34.7 bits (78), Expect(2) = 1e-11
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -3
Query: 271 LEWNKCVFGNIFFRKRKLWARLESARRKLAYAPSQR 164
L WN+ VFGNIF RKRK+ R+ +R Y S R
Sbjct: 283 LLWNRNVFGNIFNRKRKIENRILGIQRAWNYNTSVR 318
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 60.5 bits (145), Expect(2) = 1e-11
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = -1
Query: 168 NVRLLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
+VRL DLE L EL+ VL QE+ LWFQK+R+ ++ +GDRNT FYH +++ N
Sbjct: 316 SVRLQDLEKRLLSELNEVLVQEETLWFQKARTDWIRNGDRNTTFYHRSALIKRNRN 371
Score = 34.7 bits (78), Expect(2) = 1e-11
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -3
Query: 271 LEWNKCVFGNIFFRKRKLWARLESARRKLAYAPSQR 164
L WN+ VFGNIF RKRK+ R+ +R Y S R
Sbjct: 283 LLWNRNVFGNIFNRKRKIENRILGIQRAWNYNTSVR 318
>ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus sinensis]
Length = 809
Score = 55.1 bits (131), Expect(2) = 1e-10
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = -1
Query: 159 LLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
L LE L KEL+ +L QE++LW QKSR +L+ GDRNT ++H + R R N
Sbjct: 556 LARLELKLKKELEEILTQEEILWLQKSRKEWLIQGDRNTAYFHQKTLARRRRN 608
Score = 36.6 bits (83), Expect(2) = 1e-10
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -3
Query: 349 FKEVISSSWNGRASLSISLSHLSTGLLEWNKCVFGNIFFRKRKLWARLESARRKL 185
F E +S++W + LEWN+ FGNIF +KR++ ARL ++ L
Sbjct: 494 FGEFVSNAWINSLPYLNAADIFVKKALEWNRDHFGNIFQKKRRILARLGGIQKVL 548
>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
Length = 1635
Score = 52.0 bits (123), Expect(2) = 1e-10
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = -1
Query: 159 LLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
L LE L KEL+ VL QE+LLW Q+SR ++L GDRNT ++H + R N
Sbjct: 811 LYRLEIKLKKELEEVLMQEELLWLQRSRRDWILFGDRNTAYFHQKTITRRHHN 863
Score = 39.3 bits (90), Expect(2) = 1e-10
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -3
Query: 349 FKEVISSSWNGRASLSISLSHLSTGLLEWNKCVFGNIFFRKRKLWARLESARRKLAYAP 173
F + + + W ++S + WNK +FGNIF RK+ L AR+ +R L P
Sbjct: 749 FADFMKTHWQNGVPYDRAVSEFIQQVQHWNKNIFGNIFQRKKILLARIGGVQRALERRP 807
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 63.2 bits (152), Expect(2) = 2e-10
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = -1
Query: 159 LLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
LL E L KE+DLVL QE+ LWFQKSR ++ GDRNT F+H ++R R N
Sbjct: 177 LLAKEEVLLKEMDLVLEQEETLWFQKSREKYIELGDRNTTFFHTSTIIRRRRN 229
Score = 27.3 bits (59), Expect(2) = 2e-10
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 274 LLEWNKCVFGNIFFRKRKLWARLESAR 194
L +WN+ VFG+I RK KL A ++ +
Sbjct: 140 LRKWNREVFGDIHVRKEKLVADIKEVQ 166
>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
Length = 464
Score = 60.5 bits (145), Expect(2) = 1e-09
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = -1
Query: 159 LLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
LL+ E L KE ++VL QE+++WFQKSR ++ GDRNT+++H ++R R N
Sbjct: 287 LLNKEDVLIKEFEVVLEQEEIVWFQKSREKWIALGDRNTKYFHTSTIIRRRRN 339
Score = 27.7 bits (60), Expect(2) = 1e-09
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 274 LLEWNKCVFGNIFFRKRKLWARLESAR 194
L +WNK VFGNI RK KL +++ +
Sbjct: 250 LKKWNKEVFGNIQQRKDKLVQEIQAVQ 276
>ref|XP_004292397.1| PREDICTED: uncharacterized protein LOC101292185 [Fragaria vesca
subsp. vesca]
Length = 258
Score = 43.5 bits (101), Expect(2) = 4e-09
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = -1
Query: 171 HNVRLLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYH 31
HN+ L DLE L + + + E + W QKS+ +L + DRNT+F+H
Sbjct: 67 HNLFLQDLEKKLIADYEKIRDAEAIFWKQKSKDKWLRECDRNTKFFH 113
Score = 42.7 bits (99), Expect(2) = 4e-09
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -3
Query: 343 EVISSSWNG-RASLSISLSHLSTGLLEWNKCVFGNIFFRKRKLWARL 206
+++S +WN L S+L+ L++WNK VFGNIF +KR L AR+
Sbjct: 10 DMVSETWNNCSGDLLSKTSNLANSLIDWNKNVFGNIFKQKRILNARI 56
>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 1613
Score = 48.5 bits (114), Expect(2) = 5e-09
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = -1
Query: 168 NVRLLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
++ L E L + + L QE+LLWFQKS ++ GDRNTRF+H+ + R + N
Sbjct: 714 SIYLRQKERQLLDDYNNTLVQEELLWFQKSIEQWVRFGDRNTRFFHIQTLARRKHN 769
Score = 37.4 bits (85), Expect(2) = 5e-09
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -3
Query: 349 FKEVISSSW-NGRASLSISLSHLSTGLLEWNKCVFGNIFFRKRKLWARLESARRKLAYAP 173
++++++ SW +G + LS + LE+N VFGNIF +K +L ++ +++L
Sbjct: 654 YRDIVNQSWWSGNRGIHGKLSEVQKNSLEFNSKVFGNIFVKKCELEQQINYLQKRLEVVD 713
Query: 172 S 170
S
Sbjct: 714 S 714
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/90 (38%), Positives = 46/90 (51%)
Frame = -1
Query: 270 WNGISACLAIFSFGNGNYGLGWKVLGVNWLMPPHNVRLLDLEHYLCKELDLVLHQEQLLW 91
W IS A+ S G N+ L+ LE L +E+D+VL E+ LW
Sbjct: 302 WARISGVQALLSTGRQNH-------------------LIKLEAKLRREMDIVLDDEETLW 342
Query: 90 FQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
FQKSR + DGDRNTR++HL V+R N
Sbjct: 343 FQKSRMEAICDGDRNTRYFHLSTVIRRSRN 372
>ref|XP_002520539.1| protein binding protein, putative [Ricinus communis]
gi|223540381|gb|EEF41952.1| protein binding protein,
putative [Ricinus communis]
Length = 397
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = -1
Query: 168 NVRLLDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
N L+ LE L +ELDLVLHQ+++ WFQKSR +++ DRNT+++HL +VR N
Sbjct: 333 NPGLVKLEKKLRQELDLVLHQKEVHWFQKSRRDWIMSSDRNTKYFHLSTLVRRSKN 388
>gb|ABO80460.1| RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
truncatula]
Length = 311
Score = 38.5 bits (88), Expect(2) = 5e-06
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = -1
Query: 132 KELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHL 28
KE + +L QE++ W+QKSR ++ GD+N+ F+ L
Sbjct: 268 KEYNHILFQEEMFWYQKSREKWVKFGDKNSSFFML 302
Score = 37.4 bits (85), Expect(2) = 5e-06
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -3
Query: 349 FKEVISSSWNG-RASLSISLSHLSTGLLEWNKCVFGNIFFRKRKLWARLE 203
+ ++S++WN S S++L+ + + +NK VFGNIF RKR + RL+
Sbjct: 219 YANLVSNAWNSSNHSTSVALNKVRENSIIFNKDVFGNIFKRKRHIENRLK 268
>emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera]
Length = 1930
Score = 38.9 bits (89), Expect(2) = 6e-06
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = -1
Query: 156 LDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHRAN 1
LDLE Y K+ L+ E+ W QKSR +L +GD+NT+++H R R N
Sbjct: 1239 LDLEEY--KKWALL---EETSWRQKSREIWLREGDKNTKYFHKMANARARRN 1285
Score = 36.6 bits (83), Expect(2) = 6e-06
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Frame = -3
Query: 349 FKEVISSSWNGRA-------SLSISLSHLSTGLLEWNKCVFGNIFFRKRKLWARLESARR 191
FK+++ S WNG + ++ L L L +WNK V GN+ F + + ++RL+
Sbjct: 1163 FKDLVKSWWNGYSVEGYSSHCIAEKLKALKKDLKKWNKEVVGNVSFNRAEAFSRLQQWEA 1222
Query: 190 K 188
K
Sbjct: 1223 K 1223
>gb|ABA95978.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 476
Score = 55.1 bits (131), Expect = 1e-05
Identities = 21/50 (42%), Positives = 38/50 (76%)
Frame = -1
Query: 156 LDLEHYLCKELDLVLHQEQLLWFQKSRSSFLLDGDRNTRFYHLFVVVRHR 7
L+L++YL L L+L +E++ W+Q++++ ++DGDRNT++YHL +HR
Sbjct: 131 LNLKNYLKNRLALLLREEEIKWYQRAKTKRIVDGDRNTKYYHLIANGKHR 180