BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00036974
         (451 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314653.1| hypothetical protein POPTR_0010s08780g [Popu...   120   2e-25
gb|EXB38410.1| DNA-directed RNA polymerase II subunit [Morus not...   110   2e-22
gb|EOY05898.1| RNA polymerase Rpb7-like, N-terminal domain, puta...   107   2e-21
gb|EOY05895.1| DNA-directed RNA polymerase II subunit RPB7, puta...   107   2e-21
ref|XP_006838851.1| hypothetical protein AMTR_s00002p00265350 [A...   104   1e-20
gb|EMJ24730.1| hypothetical protein PRUPE_ppa012042mg [Prunus pe...   104   1e-20
ref|XP_004288440.1| PREDICTED: DNA-directed RNA polymerase II su...   103   2e-20
ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II su...   101   9e-20
emb|CBI26363.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...   100   2e-19
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep...    98   1e-18
ref|XP_006605321.1| PREDICTED: uncharacterized protein LOC100527...    95   8e-18
ref|XP_006605319.1| PREDICTED: uncharacterized protein LOC100527...    95   8e-18
gb|EPS63140.1| hypothetical protein M569_11648, partial [Genlise...    95   8e-18
ref|NP_001238607.1| uncharacterized protein LOC100527862 [Glycin...    95   8e-18
gb|EOY19674.1| RNA polymerase Rpb7-like, N-terminal domain [Theo...    95   1e-17
gb|EOY19671.1| RNA polymerase Rpb7-like, N-terminal domain isofo...    95   1e-17
ref|XP_006282711.1| hypothetical protein CARUB_v10005692mg, part...    95   1e-17
ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II su...    95   1e-17
ref|XP_006284628.1| hypothetical protein CARUB_v10005859mg [Caps...    94   1e-17

>ref|XP_002314653.1| hypothetical protein POPTR_0010s08780g [Populus trichocarpa]
           gi|222863693|gb|EEF00824.1| hypothetical protein
           POPTR_0010s08780g [Populus trichocarpa]
          Length = 189

 Score =  120 bits (300), Expect = 2e-25
 Identities = 67/149 (44%), Positives = 87/149 (58%)
 Frame = -2

Query: 447 TRLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETM 268
           T LLK LL +K+S+ HGY+L VT+LK  GKG+     SG  +  V F CRTF P  GE +
Sbjct: 31  THLLKDLLSMKASKDHGYFLAVTNLKSIGKGEVVNK-SGDVLFHVEFKCRTFMPMKGEIL 89

Query: 267 LGVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXX 88
            GVVH    HG LLRCGP+++IFLS RKM  Y  +   +   F ND L+RIE        
Sbjct: 90  QGVVHRTFRHGVLLRCGPVKYIFLSARKMPNY-QYTSEENPVFLNDELARIENNVLVRFS 148

Query: 87  XXXXXXVDKEYRTKREFKVLASLEGGSFG 1
                 ++K +  +R+F +LASL G S G
Sbjct: 149 VLDVRWIEKMWDMRRDFMMLASLVGDSLG 177


>gb|EXB38410.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 202

 Score =  110 bits (275), Expect = 2e-22
 Identities = 68/160 (42%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
 Frame = -2

Query: 447 TRLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETM 268
           TRLL+ L+  K+S+ HGY+L VTSLK  GK K  E  SG    PV F CRTF P  GE +
Sbjct: 33  TRLLEDLVREKASKDHGYFLAVTSLKKIGKMKAVEE-SGDVFFPVVFNCRTFLPYEGEIL 91

Query: 267 LGVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAA-----------FTNDSLS 121
            G+VH I+ HG  LRCGPI++ +LS RKM  Y  +V G+K A           F ++  +
Sbjct: 92  QGIVHCIYRHGVFLRCGPIKYAYLSARKMPGY-QYVYGQKMACQKCGHDRKPLFVSNEFA 150

Query: 120 RIEXXXXXXXXXXXXXXVDKEYRTKREFKVLASLEGGSFG 1
           +IE               +     K EF VLA+LEG S G
Sbjct: 151 KIENGVVVCFMVLGVRWFENWGNVKNEFGVLATLEGDSLG 190


>gb|EOY05898.1| RNA polymerase Rpb7-like, N-terminal domain, putative isoform 4
           [Theobroma cacao] gi|508714002|gb|EOY05899.1| RNA
           polymerase Rpb7-like, N-terminal domain, putative
           isoform 4 [Theobroma cacao]
          Length = 185

 Score =  107 bits (267), Expect = 2e-21
 Identities = 64/147 (43%), Positives = 82/147 (55%)
 Frame = -2

Query: 441 LLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETMLG 262
           LL+ L   ++S+ HGY+L+VTSLK  GKG   +  SG  +  V FTCRTF P  GE + G
Sbjct: 33  LLEDLFKERASEDHGYFLSVTSLKSIGKGDVVDE-SGNMVFTVVFTCRTFKPFKGEVLQG 91

Query: 261 VVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXXX 82
           VVH I   G  LRCGP+R  +LS  KM  YH +VPG K  F +D LS+IE          
Sbjct: 92  VVHHICHRGVFLRCGPVRIAYLSAWKMPNYH-YVPGAKPVFISDDLSKIEKDVVVCFLVL 150

Query: 81  XXXXVDKEYRTKREFKVLASLEGGSFG 1
                 +     R+F++LASL   S G
Sbjct: 151 AV----RWISASRDFELLASLNADSLG 173


>gb|EOY05895.1| DNA-directed RNA polymerase II subunit RPB7, putative isoform 1
           [Theobroma cacao] gi|508713999|gb|EOY05896.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao] gi|508714000|gb|EOY05897.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao]
          Length = 190

 Score =  107 bits (267), Expect = 2e-21
 Identities = 64/147 (43%), Positives = 82/147 (55%)
 Frame = -2

Query: 441 LLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETMLG 262
           LL+ L   ++S+ HGY+L+VTSLK  GKG   +  SG  +  V FTCRTF P  GE + G
Sbjct: 38  LLEDLFKERASEDHGYFLSVTSLKSIGKGDVVDE-SGNMVFTVVFTCRTFKPFKGEVLQG 96

Query: 261 VVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXXX 82
           VVH I   G  LRCGP+R  +LS  KM  YH +VPG K  F +D LS+IE          
Sbjct: 97  VVHHICHRGVFLRCGPVRIAYLSAWKMPNYH-YVPGAKPVFISDDLSKIEKDVVVCFLVL 155

Query: 81  XXXXVDKEYRTKREFKVLASLEGGSFG 1
                 +     R+F++LASL   S G
Sbjct: 156 AV----RWISASRDFELLASLNADSLG 178


>ref|XP_006838851.1| hypothetical protein AMTR_s00002p00265350 [Amborella trichopoda]
           gi|548841357|gb|ERN01420.1| hypothetical protein
           AMTR_s00002p00265350 [Amborella trichopoda]
          Length = 188

 Score =  104 bits (260), Expect = 1e-20
 Identities = 59/148 (39%), Positives = 88/148 (59%)
 Frame = -2

Query: 444 RLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETML 265
           +LL+ + ++K++QKHGY + VTSLK  G+GK  + +SG  I PV F C TF P VGE + 
Sbjct: 31  KLLEDVAHIKATQKHGYLVAVTSLKERGEGKVRD-FSGEVIFPVVFKCLTFKPFVGEILH 89

Query: 264 GVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXX 85
           GV+  I +HG +L+CGP+  +FLS +KM ++  +V G+   F ND   ++E         
Sbjct: 90  GVITQIMKHGIILKCGPVENVFLSLKKMEDF-KYVHGENPIFVNDKNLKLERHGVVRFRV 148

Query: 84  XXXXXVDKEYRTKREFKVLASLEGGSFG 1
                ++ +    REF +LASLEG   G
Sbjct: 149 LALQWMEGQ----REFMLLASLEGDFLG 172


>gb|EMJ24730.1| hypothetical protein PRUPE_ppa012042mg [Prunus persica]
          Length = 186

 Score =  104 bits (260), Expect = 1e-20
 Identities = 63/149 (42%), Positives = 85/149 (57%)
 Frame = -2

Query: 447 TRLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETM 268
           TRLL+ LL  K+ +  GY+L VT +K  GKG+   + SG    PV F CR F P  GE +
Sbjct: 31  TRLLEGLLSEKADEDLGYFLAVTGIKRIGKGEVVHN-SGDVFFPVVFNCRMFLPRKGEIL 89

Query: 267 LGVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXX 88
            GVV  +H  G  LRCGP++++FLS RKM  Y  +V G+K  F +D L+RIE        
Sbjct: 90  EGVVDHVHRLGVFLRCGPVKYVFLSARKMPNY-RYVVGEKPVFLHDDLARIEKDVVVRFE 148

Query: 87  XXXXXXVDKEYRTKREFKVLASLEGGSFG 1
                 + +E  TK EF +LA+L+G   G
Sbjct: 149 VFGVRWMRREDITK-EFMMLATLQGDLLG 176


>ref|XP_004288440.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb7-like
           [Fragaria vesca subsp. vesca]
          Length = 188

 Score =  103 bits (258), Expect = 2e-20
 Identities = 60/149 (40%), Positives = 82/149 (55%)
 Frame = -2

Query: 447 TRLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETM 268
           T+LLK LL  K+S+ HGY+L VT+LK  G G+  + +S   +  V F+CRTF P  GE +
Sbjct: 32  TQLLKDLLKEKASKDHGYFLKVTALKKVGTGQILD-HSRKMLFHVAFSCRTFIPLQGEIL 90

Query: 267 LGVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXX 88
            GVV+ +H  G  +RCGP+ + +LS RKM  YH +V G K  F    L++IE        
Sbjct: 91  EGVVYKVHNLGVFIRCGPLNYAYLSARKMPNYH-YVAGTKPFFLKGDLAKIEKKVVVRFR 149

Query: 87  XXXXXXVDKEYRTKREFKVLASLEGGSFG 1
                   K    + EF VL S+ G S G
Sbjct: 150 VLHARWTAKSREIRNEFVVLGSMVGDSLG 178


>ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449432630|ref|XP_004134102.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
           gi|449504102|ref|XP_004162253.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Cucumis sativus]
           gi|449504105|ref|XP_004162254.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Cucumis sativus]
          Length = 190

 Score =  101 bits (252), Expect = 9e-20
 Identities = 59/147 (40%), Positives = 84/147 (57%)
 Frame = -2

Query: 447 TRLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETM 268
           T LL+ LL  K+++ HGY+L+VTSL+  GKG        V+  P+ F CRTF P  GE +
Sbjct: 31  TCLLENLLKEKANKDHGYFLSVTSLRSIGKGIVKNESQCVSF-PITFICRTFLPFEGEIL 89

Query: 267 LGVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXX 88
            GVV  I + G LL+CGPI+++FLS RKM  Y  +V G+   F++   + I         
Sbjct: 90  HGVVRHIFQRGLLLKCGPIKYVFLSARKMPTY-QYVGGENPVFSSKEFATIGNDVVVRFS 148

Query: 87  XXXXXXVDKEYRTKREFKVLASLEGGS 7
                 ++K    K+EF +LASLEG +
Sbjct: 149 VLGVRWIEKRGCIKKEFVMLASLEGNN 175


>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  100 bits (250), Expect = 2e-19
 Identities = 60/148 (40%), Positives = 86/148 (58%)
 Frame = -2

Query: 444 RLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETML 265
           RLL      K++Q+ GY+L VT+L+  G+GK  + +SG  + PV F+C TF    GE + 
Sbjct: 97  RLLDAFSNKKATQELGYFLAVTTLENIGEGKVRQ-HSGDVLFPVVFSCVTFKLFRGEILD 155

Query: 264 GVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXX 85
           GVVH + +HG +LRCGP+  I+LS +KM +Y  +VPG+   F N+ LS+IE         
Sbjct: 156 GVVHKVLKHGVILRCGPVENIYLSCQKMPDY-RYVPGENPVFLNEKLSKIEKDVVVRFIV 214

Query: 84  XXXXXVDKEYRTKREFKVLASLEGGSFG 1
                ++ E    REF+ L SLEG   G
Sbjct: 215 MGTKWLEAE----REFQALVSLEGDYLG 238


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147822056|emb|CAN61549.1| hypothetical
           protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score =  100 bits (250), Expect = 2e-19
 Identities = 60/148 (40%), Positives = 86/148 (58%)
 Frame = -2

Query: 444 RLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETML 265
           RLL      K++Q+ GY+L VT+L+  G+GK  + +SG  + PV F+C TF    GE + 
Sbjct: 32  RLLDAFSNKKATQELGYFLAVTTLENIGEGKVRQ-HSGDVLFPVVFSCVTFKLFRGEILD 90

Query: 264 GVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXX 85
           GVVH + +HG +LRCGP+  I+LS +KM +Y  +VPG+   F N+ LS+IE         
Sbjct: 91  GVVHKVLKHGVILRCGPVENIYLSCQKMPDY-RYVPGENPVFLNEKLSKIEKDVVVRFIV 149

Query: 84  XXXXXVDKEYRTKREFKVLASLEGGSFG 1
                ++ E    REF+ L SLEG   G
Sbjct: 150 MGTKWLEAE----REFQALVSLEGDYLG 173


>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223538083|gb|EEF39694.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 60/148 (40%), Positives = 82/148 (55%)
 Frame = -2

Query: 444 RLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETML 265
           RLL+     K+++  GYYL VT+L+  G+GK  E ++G  + PV F   TF    GE + 
Sbjct: 32  RLLEDFASKKATKDLGYYLAVTTLESIGEGKVRE-HTGDVLFPVVFNGITFKIFRGEILE 90

Query: 264 GVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXX 85
           GVVH + +HG  +RCGPI  I+LS  KM +YH +VPG+   F ND  S+IE         
Sbjct: 91  GVVHKVLKHGVFIRCGPIENIYLSCMKMPDYH-YVPGENPVFLNDKTSKIEKDVVVRFIV 149

Query: 84  XXXXXVDKEYRTKREFKVLASLEGGSFG 1
                ++ E    REF+ L SLEG   G
Sbjct: 150 IGTKWLEAE----REFQALVSLEGDYLG 173


>ref|XP_006605321.1| PREDICTED: uncharacterized protein LOC100527862 isoform X3 [Glycine
           max]
          Length = 197

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 57/148 (38%), Positives = 81/148 (54%)
 Frame = -2

Query: 444 RLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETML 265
           RLL      K+++  GY+L VT+L+  G+GK  + ++G  + PV F   TF    GE + 
Sbjct: 49  RLLSDFAVKKATKDLGYFLAVTTLEKIGEGKVRQ-HTGDVLFPVVFNVITFKFFKGEILE 107

Query: 264 GVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXX 85
           GVVH + +HG  +RCGPI  ++LSN KM +Y  +VPG+ A F ND +S+I          
Sbjct: 108 GVVHKVLKHGVFMRCGPIENVYLSNLKMPDY-RYVPGENACFMNDKMSKI----GKDVTV 162

Query: 84  XXXXXVDKEYRTKREFKVLASLEGGSFG 1
                  K    +REF+ L SLEG   G
Sbjct: 163 RFSVIGTKWMEAEREFQALVSLEGDYLG 190


>ref|XP_006605319.1| PREDICTED: uncharacterized protein LOC100527862 isoform X1 [Glycine
           max] gi|571562465|ref|XP_006605320.1| PREDICTED:
           uncharacterized protein LOC100527862 isoform X2 [Glycine
           max]
          Length = 198

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 57/148 (38%), Positives = 81/148 (54%)
 Frame = -2

Query: 444 RLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETML 265
           RLL      K+++  GY+L VT+L+  G+GK  + ++G  + PV F   TF    GE + 
Sbjct: 50  RLLSDFAVKKATKDLGYFLAVTTLEKIGEGKVRQ-HTGDVLFPVVFNVITFKFFKGEILE 108

Query: 264 GVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXX 85
           GVVH + +HG  +RCGPI  ++LSN KM +Y  +VPG+ A F ND +S+I          
Sbjct: 109 GVVHKVLKHGVFMRCGPIENVYLSNLKMPDY-RYVPGENACFMNDKMSKI----GKDVTV 163

Query: 84  XXXXXVDKEYRTKREFKVLASLEGGSFG 1
                  K    +REF+ L SLEG   G
Sbjct: 164 RFSVIGTKWMEAEREFQALVSLEGDYLG 191


>gb|EPS63140.1| hypothetical protein M569_11648, partial [Genlisea aurea]
          Length = 179

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 54/149 (36%), Positives = 81/149 (54%)
 Frame = -2

Query: 447 TRLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETM 268
           T LL      K+S+ HGY L VT++   G+G+  + +SG  + PV F+C  F    GE +
Sbjct: 34  THLLSVFAAKKASKDHGYLLAVTTVDRIGEGRVRQ-HSGEVLFPVEFSCVAFRMATGEIL 92

Query: 267 LGVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXX 88
            G VH I +HG  +RCGP+  ++L+++KM +Y  +VPG+   F N   SRIE        
Sbjct: 93  EGTVHKILKHGVFMRCGPVENVYLTHQKMKDY-EYVPGENPYFMNAKSSRIERGGVVRFL 151

Query: 87  XXXXXXVDKEYRTKREFKVLASLEGGSFG 1
                 V+ E    +EF+ +ASL+G   G
Sbjct: 152 VMGVKFVENE----KEFQAVASLDGDYLG 176


>ref|NP_001238607.1| uncharacterized protein LOC100527862 [Glycine max]
           gi|571562471|ref|XP_006605322.1| PREDICTED:
           uncharacterized protein LOC100527862 isoform X4 [Glycine
           max] gi|255633396|gb|ACU17055.1| unknown [Glycine max]
          Length = 180

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 57/148 (38%), Positives = 81/148 (54%)
 Frame = -2

Query: 444 RLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETML 265
           RLL      K+++  GY+L VT+L+  G+GK  + ++G  + PV F   TF    GE + 
Sbjct: 32  RLLSDFAVKKATKDLGYFLAVTTLEKIGEGKVRQ-HTGDVLFPVVFNVITFKFFKGEILE 90

Query: 264 GVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXX 85
           GVVH + +HG  +RCGPI  ++LSN KM +Y  +VPG+ A F ND +S+I          
Sbjct: 91  GVVHKVLKHGVFMRCGPIENVYLSNLKMPDY-RYVPGENACFMNDKMSKI----GKDVTV 145

Query: 84  XXXXXVDKEYRTKREFKVLASLEGGSFG 1
                  K    +REF+ L SLEG   G
Sbjct: 146 RFSVIGTKWMEAEREFQALVSLEGDYLG 173


>gb|EOY19674.1| RNA polymerase Rpb7-like, N-terminal domain [Theobroma cacao]
          Length = 176

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 58/148 (39%), Positives = 84/148 (56%)
 Frame = -2

Query: 444 RLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETML 265
           RLL      K+++  GY++ VT+L+  G GK  ++ +G  + PV F+  TF    GE + 
Sbjct: 32  RLLDDFACKKATKDLGYFIAVTTLESIGDGKVRQN-TGDVLFPVVFSGITFKMFRGEILE 90

Query: 264 GVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXX 85
           GVVH I +HG  LRCGP++ I+LS+ KM +YH +VPG+ A F N+  S+IE         
Sbjct: 91  GVVHKILKHGVFLRCGPVQNIYLSHLKMPDYH-YVPGENAIFMNEKHSKIEKDVVVRFIV 149

Query: 84  XXXXXVDKEYRTKREFKVLASLEGGSFG 1
                ++ E    REF+ L SLEG   G
Sbjct: 150 IGTKWLEAE----REFQALVSLEGDYLG 173


>gb|EOY19671.1| RNA polymerase Rpb7-like, N-terminal domain isoform 1 [Theobroma
           cacao] gi|508727775|gb|EOY19672.1| RNA polymerase
           Rpb7-like, N-terminal domain isoform 2, partial
           [Theobroma cacao]
          Length = 176

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 56/139 (40%), Positives = 81/139 (58%)
 Frame = -2

Query: 417 KSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETMLGVVHWIHEH 238
           K+++  GY++ VT+L+  G GK  ++ +G  + PV F+  TF    GE + GVVH I +H
Sbjct: 41  KATKDLGYFIAVTTLESIGDGKVRQN-TGDVLFPVVFSGITFKMFRGEILEGVVHKILKH 99

Query: 237 GALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXXXXXXXVDKE 58
           G  LRCGP++ I+LS+ KM +YH +VPG+ A F ND  S+IE              ++ E
Sbjct: 100 GVFLRCGPVQNIYLSHLKMPDYH-YVPGENAIFMNDKHSKIEKDVVVRFIVIGTKWLEAE 158

Query: 57  YRTKREFKVLASLEGGSFG 1
               REF+ L SLEG   G
Sbjct: 159 ----REFQALVSLEGDYLG 173


>ref|XP_006282711.1| hypothetical protein CARUB_v10005692mg, partial [Capsella rubella]
           gi|482551416|gb|EOA15609.1| hypothetical protein
           CARUB_v10005692mg, partial [Capsella rubella]
          Length = 221

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
 Frame = -2

Query: 447 TRLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTH----------ESYSGVTIIPVNFTCR 298
           TRLL+ L + K+ +KHG+YL +TS+K  GK K               + +   PV+FTCR
Sbjct: 48  TRLLQVLTHEKACRKHGFYLGITSVKSIGKNKNKIININNNNEDNHQAQILTFPVSFTCR 107

Query: 297 TFTPCVGETMLGVVHWIHEHGALLRCGPIRWIFLSNRKMGEYH---NFVPGKKAAFTNDS 127
           TF P  G+ + GVV  +  +G  +  GP+R+ +LS  KM +YH   +    +K  F  D 
Sbjct: 108 TFLPARGDVLQGVVKMVLSNGVFISSGPLRYAYLSPLKMPDYHYVQSESDDEKPYFQKDD 167

Query: 126 LSRIEXXXXXXXXXXXXXXVDKEYRTKREFKVLASLEGGSFG 1
           LS+I                ++ ++ + ++ VLA+LEG + G
Sbjct: 168 LSKIAVGVVVQFVVLAVRFKERPHKIRNDYYVLATLEGDTLG 209


>ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Solanum lycopersicum]
          Length = 180

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 57/148 (38%), Positives = 83/148 (56%)
 Frame = -2

Query: 444 RLLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETML 265
           RLL      K+S+  GY++ VT+L+  G+GK  E ++G  + PV F+C TF    GE + 
Sbjct: 32  RLLDDFASKKASKSLGYFMAVTTLERIGEGKVRE-HTGDVLFPVEFSCITFKIFRGEILD 90

Query: 264 GVVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXX 85
           GVV  I +HG  LRCGP   ++LS++KM +Y  +VPG+   F N+ +SRIE         
Sbjct: 91  GVVEKILKHGVFLRCGPTDKVYLSHQKMADY-KYVPGENPIFMNEKMSRIEKDTVVRFIV 149

Query: 84  XXXXXVDKEYRTKREFKVLASLEGGSFG 1
                V+ E    +EF+ + SLEG   G
Sbjct: 150 VGARYVEAE----KEFQAVVSLEGDYLG 173


>ref|XP_006284628.1| hypothetical protein CARUB_v10005859mg [Capsella rubella]
           gi|482553333|gb|EOA17526.1| hypothetical protein
           CARUB_v10005859mg [Capsella rubella]
          Length = 178

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 56/147 (38%), Positives = 82/147 (55%)
 Frame = -2

Query: 441 LLKYLLYVKSSQKHGYYLTVTSLKCTGKGKTHESYSGVTIIPVNFTCRTFTPCVGETMLG 262
           LL      K++++ GYY+ VT+L   G+GK  E ++G  + PV F+  TF    GE + G
Sbjct: 33  LLNAFASKKATKELGYYVAVTTLDKIGEGKIRE-HTGEVLFPVMFSGMTFKIFKGEIIHG 91

Query: 261 VVHWIHEHGALLRCGPIRWIFLSNRKMGEYHNFVPGKKAAFTNDSLSRIEXXXXXXXXXX 82
           VVH + +HG  +RCGPI  ++LS  KM +Y  ++PG+   F ND +SRI+          
Sbjct: 92  VVHKVLKHGVFMRCGPIENVYLSYMKMPDY-KYIPGENPIFMNDKMSRIQVEATVRVVVL 150

Query: 81  XXXXVDKEYRTKREFKVLASLEGGSFG 1
               ++ E    REF+ LASLEG   G
Sbjct: 151 GTKWMEAE----REFQALASLEGDYLG 173