BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00036955
         (454 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ05424.1| hypothetical protein PRUPE_ppa002924mg [Prunus pe...   132   6e-29
ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containi...   131   1e-28
ref|XP_004305697.1| PREDICTED: pentatricopeptide repeat-containi...   106   3e-21
gb|EOY14251.1| Pentatricopeptide repeat-containing protein, puta...   105   6e-21
ref|XP_002533676.1| pentatricopeptide repeat-containing protein,...   103   2e-20
ref|XP_004153972.1| PREDICTED: pentatricopeptide repeat-containi...   102   5e-20
ref|XP_004497944.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_006653244.1| PREDICTED: pentatricopeptide repeat-containi...    95   9e-18
gb|EMT03032.1| hypothetical protein F775_06842 [Aegilops tauschii]     88   1e-15
tpg|DAA38280.1| TPA: hypothetical protein ZEAMMB73_630366 [Zea m...    87   2e-15
ref|XP_002443455.1| hypothetical protein SORBIDRAFT_08g019750 [S...    87   2e-15
ref|XP_004170735.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
ref|XP_004975215.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
gb|EOY25365.1| Tetratricopeptide repeat-like superfamily protein...    76   4e-12
ref|XP_002512645.1| pentatricopeptide repeat-containing protein,...    76   5e-12
ref|XP_006443657.1| hypothetical protein CICLE_v10019256mg [Citr...    75   7e-12
ref|XP_006659839.1| PREDICTED: pentatricopeptide repeat-containi...    75   9e-12
ref|XP_006356287.1| PREDICTED: pentatricopeptide repeat-containi...    75   1e-11

>gb|EMJ05424.1| hypothetical protein PRUPE_ppa002924mg [Prunus persica]
          Length = 621

 Score =  132 bits (331), Expect = 6e-29
 Identities = 67/149 (44%), Positives = 92/149 (61%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEMLQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLAM 274
           SWNI ISF++ +G+ V     F+EM  +VAP+ ETLT+V + ++    L  G+ LHCLA 
Sbjct: 204 SWNIRISFYSWRGDVVKVRDLFHEMQGEVAPSNETLTLVISAVTKHGILSQGESLHCLAT 263

Query: 273 KFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFIXXXXXXXXXXX 94
           K GLCD VL T  L+ Y+KCG+L +S KLF E+PHRN+I W +MM GFI           
Sbjct: 264 KSGLCDDVLQTSLLDFYAKCGELGNSDKLFREIPHRNSITWGAMMFGFILNGYFNEAVGL 323

Query: 93  XXXXXXXXLQNKPEIIASLLDGYANLGAL 7
                   ++   EI+ SL+D +AN+GAL
Sbjct: 324 FGRMQAEGVEPGAEILRSLVDAFANIGAL 352


>ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score =  131 bits (329), Expect = 1e-28
 Identities = 66/149 (44%), Positives = 93/149 (62%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEMLQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLAM 274
           SWNI I+F++ +G+     +RFNEM ++V  + E+LT+V + ++N  NL  G  LHC A+
Sbjct: 319 SWNILIAFYSFRGDIAEVAERFNEMRREVTSSIESLTLVVSAIANCANLSEGGMLHCSAI 378

Query: 273 KFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFIXXXXXXXXXXX 94
           K GL D VL+TC L LY+KCG L+ S +LF ++PHRN+I WSSMMSGF            
Sbjct: 379 KTGLHDTVLMTCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIEL 438

Query: 93  XXXXXXXXLQNKPEIIASLLDGYANLGAL 7
                   LQ   +II++L+  Y +LGAL
Sbjct: 439 YQQMLASGLQPNHDIISTLVIAYTHLGAL 467



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
 Frame = -2

Query: 450 WNIYISFHNSKGNDVVATQRFNEMLQ-DVAPNAETLTIVTTTL-SNSRNLDHGQQLHCLA 277
           WN  I  H   G    A  ++  M +  VA ++ T  I+   + S    +++G+ +HC+A
Sbjct: 117 WNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVA 176

Query: 276 MKFGLCDHVLL-TCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFI 127
           MK G    V      L +Y KCG + +++KLF E+ HR+ ++W+S++SG+I
Sbjct: 177 MKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYI 227


>ref|XP_004305697.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 616

 Score =  106 bits (265), Expect = 3e-21
 Identities = 62/149 (41%), Positives = 83/149 (55%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEMLQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLAM 274
           +WNI IS++ S+G+ V     F EM  +VAP+ ETLTIV + L+    L  G+ LH LA+
Sbjct: 204 TWNICISYYTSRGDVVKVRDLFKEMQGEVAPSIETLTIVISALAIHGILSQGESLHGLAI 263

Query: 273 KFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFIXXXXXXXXXXX 94
           K GL D VL T  L+ Y+KC  L+S+ KLF E+  RN I   +MM G I           
Sbjct: 264 KSGLRDDVLQTSLLDFYAKCAKLESADKLFREIRDRNCITCGAMMFGLIQNGYIYEAVGV 323

Query: 93  XXXXXXXXLQNKPEIIASLLDGYANLGAL 7
                   L    EI+ +L+D +ANLGAL
Sbjct: 324 FRQIQAAGLDPGAEILRNLIDAFANLGAL 352


>gb|EOY14251.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 682

 Score =  105 bits (262), Expect = 6e-21
 Identities = 57/149 (38%), Positives = 85/149 (57%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEMLQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLAM 274
           SWN  IS+++ +G+      RF +M  +V  + ETLT+V +  + S NL  G+ LHC A+
Sbjct: 262 SWNTLISYYSLRGDVGEVADRFCKMQVEVKVSMETLTLVISAFAKSGNLSQGEILHCCAL 321

Query: 273 KFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFIXXXXXXXXXXX 94
           K GL D VL T  L+ Y+KCG L +S +LF  +  RN+IAWS+M+SG+I           
Sbjct: 322 KLGLHDDVLQTSLLDFYAKCGLLKNSIQLFKGISSRNSIAWSAMLSGYIQNGFFKEAIVL 381

Query: 93  XXXXXXXXLQNKPEIIASLLDGYANLGAL 7
                   L   PEI+ +++   A++GAL
Sbjct: 382 FKEMQAAGLHPTPEILGNIVHACAHVGAL 410


>ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526427|gb|EEF28706.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 726

 Score =  103 bits (257), Expect = 2e-20
 Identities = 55/149 (36%), Positives = 85/149 (57%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEMLQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLAM 274
           SWN  I F+  +G+       FN+M  +VA ++ETLT+V +  +   NL  G++LH  ++
Sbjct: 297 SWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTLVISVFAKIGNLVEGEKLHSFSI 356

Query: 273 KFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFIXXXXXXXXXXX 94
           K GLCD VLL   L+ Y+KCG+L +S +LF E+P R++  W  MMSG I           
Sbjct: 357 KVGLCDDVLLASLLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMMSGCIQNGYFDEAIHL 416

Query: 93  XXXXXXXXLQNKPEIIASLLDGYANLGAL 7
                   +Q + +I+ SL+D  ++LG+L
Sbjct: 417 FRQMQASGVQLQAQILGSLVDACSHLGSL 445



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEMLQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLAM 274
           SW   IS + S+GN   A + FN+M  ++ PN+ TL ++        N   G+QLHC  +
Sbjct: 197 SWTSMISGYVSEGNVFSAFELFNKMRLEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYII 256

Query: 273 KFGLCDH-VLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMM 139
           K GL  +  +    L +YS  G       LF E+  R+ I+W++++
Sbjct: 257 KNGLLIYGSVQNSILRMYSITGSAKEVESLFVEIYRRDVISWNTLI 302


>ref|XP_004153972.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Cucumis sativus]
          Length = 591

 Score =  102 bits (254), Expect = 5e-20
 Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEMLQDVAPNAETLTIVTTTL--SNSRNLDHGQQLHCL 280
           SWNI +SF++S G+ V      N+++ +V  + ETLTI+ + +  S+SR L  G+ LH L
Sbjct: 179 SWNILMSFYSSMGDIVKVVDILNKIMGEVPLSIETLTILISGIATSDSRCLMLGENLHSL 238

Query: 279 AMKFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFIXXXXXXXXX 100
           A+K GL D +L T  L +Y+K G+L++ST LF E+P+R+ + W +MMS FI         
Sbjct: 239 AIKSGLYDGILCTSLLGMYAKFGELENSTSLFKEIPNRSIVTWGAMMSSFIQNGHFDDAV 298

Query: 99  XXXXXXXXXXLQNKPEIIASLLDGYANLGAL 7
                     L+    I+  L+D YA LGAL
Sbjct: 299 DIFKQMQVAGLKPSVGILKHLIDAYAFLGAL 329



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEMLQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLAM 274
           SW   IS + + G+   A   F  M +++ PN+ T+ ++      ++ L  G+ L C  +
Sbjct: 79  SWTSMISAYVNGGDVFCALDIFEGMRRELEPNSVTVMVMLQACCATQYLVLGRLLQCYVV 138

Query: 273 KFGLC-DHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMS 136
           K GL  D  L   FL +YS+ G  D     F+E+  +NA++W+ +MS
Sbjct: 139 KNGLLFDTHLQNSFLRMYSRLGRQDEFGVFFSEIDFKNAVSWNILMS 185


>ref|XP_004497944.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Cicer arietinum]
          Length = 620

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 61/152 (40%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEM--LQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCL 280
           SWN  ISF++SKG+ +  +  F+EM  L+    N ETL++V +  +   +L  G+ +HCL
Sbjct: 205 SWNTLISFYSSKGDIMRVSCLFDEMRTLEMHLWNIETLSLVVSAFAKRGSLYEGEGMHCL 264

Query: 279 AMKFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFIXXXXXXXXX 100
            +K G  D VLLT  L+ YSKCG L+ S +LF E+  ++ I   +MMSGFI         
Sbjct: 265 VIKTGFSDDVLLTSLLDFYSKCGKLEISVQLFNEIHFKSNITLCAMMSGFIQNGYFIDAI 324

Query: 99  XXXXXXXXXXLQN-KPEIIASLLDGYANLGAL 7
                       +  PEI  +LLD YANLGAL
Sbjct: 325 VLFQQMQAADNVDIVPEIWRNLLDAYANLGAL 356



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDV-VATQRFNEMLQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLA 277
           SW + IS +  +G DV VA   FNEM +++ PN+ TL ++      S  L+ G Q+H  A
Sbjct: 104 SWTLMISGYVDEGYDVSVAFDLFNEMRRELEPNSVTLIVMLQACCASVTLNEGIQIHGYA 163

Query: 276 MKFG-LCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMS 136
           +K G L D  +    L +Y++ G       LF+E+  +   +W++++S
Sbjct: 164 VKNGLLMDLSVKNSVLKVYARKGSAKEVDLLFSEINRKEVASWNTLIS 211


>ref|XP_006653244.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Oryza brachyantha]
          Length = 587

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEM-LQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLA 277
           SWNI IS ++S+GN    T  ++ M  ++V P+ +TLT V  T S  + L  G++LH LA
Sbjct: 232 SWNIMISEYSSEGNICKVTDMYHRMRTEEVCPSCQTLTTVVGTFSKYKCLPEGEKLHSLA 291

Query: 276 MKFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFIXXXXXXXXXX 97
           ++ GL D +L+  F++ Y+KCG LDSS +LF E     +  WS+M  GFI          
Sbjct: 292 IRSGLSDAILVASFVDFYAKCGRLDSSVQLFEEFSETGSCIWSAMNWGFIYCGQFTEVIH 351

Query: 96  XXXXXXXXXLQNKPEIIASLLDGYANLGAL 7
                         +++  L+  Y  LGAL
Sbjct: 352 LFGRMLKSPFTPSVDMLQGLIISYKELGAL 381



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEM-LQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLA 277
           SW   +S H   G+   A++ F+ M + D AP+A TL +V    +   ++  G+QLHC A
Sbjct: 131 SWTSLVSAHAGVGDVREASRLFSGMRVDDCAPSAVTLAVVLRACTAKEDIAGGRQLHCYA 190

Query: 276 MKFGLCDHVL-LTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGF 130
           +K GL D +L +   L    +   L+ +  LF + P R+A++W+ M+S +
Sbjct: 191 VKSGLSDDLLVINSILTHLCRMHALNDAVALFEQSPRRDAVSWNIMISEY 240


>gb|EMT03032.1| hypothetical protein F775_06842 [Aegilops tauschii]
          Length = 411

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEML-QDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLA 277
           SWNI IS  +S+GN       F  M  ++V P  +TLT +    +  R L+ G++LHC  
Sbjct: 23  SWNIIISEFSSQGNVGQVIDMFERMRREEVCPTCQTLTALVAAFAKHRCLEQGKRLHCFV 82

Query: 276 MKFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFIXXXXXXXXXX 97
           ++ GL D VL+  FL+ Y+KCG+++SS KLF E     +  WS+MM   I          
Sbjct: 83  IRSGLSDPVLVASFLDFYAKCGEMESSAKLFEEFRGTGSCIWSAMMWALIHHGQFLQVVH 142

Query: 96  XXXXXXXXXLQNKPEIIASLLDGYANLGA 10
                    L    +++  L+  Y  LGA
Sbjct: 143 LFGRMLNSQLAINADMLQGLVISYMELGA 171


>tpg|DAA38280.1| TPA: hypothetical protein ZEAMMB73_630366 [Zea mays]
          Length = 563

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEMLQD-VAPNAETLTIVTTTLSNSRNLDHGQQLHCLA 277
           SWNI IS ++S+GN       +  M+++ V P++ETLT V +  +  + L HG++LH  A
Sbjct: 178 SWNIIISEYSSEGNVSKVISLYVAMIEEEVCPSSETLTAVVSVFARHKFLPHGKKLHSFA 237

Query: 276 MKFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFIXXXXXXXXXX 97
           ++ GL D +L+  F++LY+KCG+L SS +LF E    +   WS+M+  FI          
Sbjct: 238 IRSGLMDTILVASFVDLYAKCGELVSSIQLFEEFNGGSKYLWSAMIWAFIYHGMFLDAIH 297

Query: 96  XXXXXXXXXLQNKPEIIASLLDGYANLGAL 7
                         +I+  LL  Y  + AL
Sbjct: 298 LFERMMGSFYFPNADILRGLLVSYTEIDAL 327


>ref|XP_002443455.1| hypothetical protein SORBIDRAFT_08g019750 [Sorghum bicolor]
           gi|241944148|gb|EES17293.1| hypothetical protein
           SORBIDRAFT_08g019750 [Sorghum bicolor]
          Length = 565

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/110 (39%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEML-QDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLA 277
           SWNI IS ++S+G        +  M  ++V P+ ETLT V    +  R+L  GQ+LH   
Sbjct: 180 SWNIIISEYSSEGRVSKVVDMYERMRREEVCPSCETLTSVVAAFAKCRHLRQGQKLHSFG 239

Query: 276 MKFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFI 127
           +K GL D +L+  F++ Y+KCG+L SS +LF E   ++   WS+M++ FI
Sbjct: 240 LKSGLIDTILVASFVDFYAKCGELPSSVQLFEEFRGKSNCIWSAMLAAFI 289


>ref|XP_004170735.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 402

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
 Frame = -2

Query: 417 GNDVVATQRFNEMLQDVAPNAETLTIVTTTL--SNSRNLDHGQQLHCLAMKFGLCDHVLL 244
           G+ V      N+++ +V  + ETLTI+ + +  S+SR L  G+ LH LA+K GL D +L 
Sbjct: 2   GDIVKVVDILNKIMGEVPLSIETLTILISGIATSDSRCLMLGENLHSLAIKSGLYDGILC 61

Query: 243 TCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFIXXXXXXXXXXXXXXXXXXXLQ 64
           T  L +Y+K G+L++ST LF E+P+R+ + W +MMS FI                   L+
Sbjct: 62  TSLLGMYAKFGELENSTSLFKEIPNRSIVTWGAMMSSFIQNGHFDDAVDIFKQMQVAGLK 121

Query: 63  NKPEIIASLLDGYANLGAL 7
               I+  L+D YA LGAL
Sbjct: 122 PSVGILKHLIDAYAFLGAL 140


>ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Cicer arietinum]
          Length = 621

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 42/110 (38%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
 Frame = -2

Query: 450 WNIYISFHNSKGNDVVATQRFNEM-LQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLAM 274
           W+  I  ++ +G  V A + FN+M  ++  PN  TL  V +  +N  +L HG  +HC  +
Sbjct: 341 WSSIIGSYSRRGESVKALKLFNKMRTEETEPNYVTLLAVISACTNLSSLKHGSGVHCYIL 400

Query: 273 KFGLCDHVLLTC--FLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGF 130
           KFGL D  +  C   +N+Y+KCG LD S K+F E P+R+++ WSS++S +
Sbjct: 401 KFGL-DFSIFVCNALINMYAKCGCLDDSLKIFLETPNRDSVTWSSLISAY 449


>ref|XP_004975215.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Setaria italica]
          Length = 495

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 43/110 (39%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEM-LQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLA 277
           SWNI IS ++S+GN       +  M  ++V P+ ETLT V    +  R L  G++LH  A
Sbjct: 110 SWNIIISVYSSEGNVSKVADMYERMRAEEVYPSCETLTSVVAAFTKHRFLLQGKKLHSFA 169

Query: 276 MKFGLCDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFI 127
           ++ GL D +L+  F++ Y+KCG+L SS +LF E    ++  WS+M+  FI
Sbjct: 170 VRSGLMDTILVASFVDFYAKCGELLSSVQLFEEFRGASSCLWSAMLWAFI 219


>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
 Frame = -2

Query: 450 WNIYISFHNSKGNDVVATQRFNEM-LQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLAM 274
           W+  I   + +G+   A + FN+M  +++ PN  TL  V +  +N  +L HG  LH    
Sbjct: 324 WSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIF 383

Query: 273 KFGLCDHVLL-TCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGF 130
           KFG C  + +    +N+Y+KCG L+ S K+F E+P+R+ + WSS++S +
Sbjct: 384 KFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAY 432


>gb|EOY25365.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 953

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/95 (41%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
 Frame = -2

Query: 405 VATQRFNEMLQ-DVAPNAETLTIVTTTLSNSRNLDHGQQLHCLAMKFG-LCDHVLLTCFL 232
           VA Q F EM++     ++ TL +  + LS+ +   HG+ LHCL++K G LCD  L    L
Sbjct: 184 VAMQFFIEMVEVGCGFDSITLLLAVSALSHMKYSIHGKSLHCLSIKVGMLCDCSLCNALL 243

Query: 231 NLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFI 127
           ++Y+KCGDL SS  +F  +  R+A++W+SM++GF+
Sbjct: 244 DMYAKCGDLTSSESMFARMESRDAVSWNSMINGFL 278


>ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548606|gb|EEF50097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 716

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
 Frame = -2

Query: 450 WNIYISFHNSKGNDVVATQRFNEMLQD-VAPNAETLTIVTTTLSNSRNLDHGQQLHCLAM 274
           W+  IS +        A + F +M +  V PN  T   V  + ++  NL  G+Q+HC  +
Sbjct: 211 WSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVL 270

Query: 273 KFGLCDHVLLT-CFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGFI 127
           K GL  +V ++   +++Y+KCG LD+S KLF E+P+RN + W++M+ G++
Sbjct: 271 KVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYV 320


>ref|XP_006443657.1| hypothetical protein CICLE_v10019256mg [Citrus clementina]
           gi|568853066|ref|XP_006480188.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g48910-like [Citrus sinensis]
           gi|557545919|gb|ESR56897.1| hypothetical protein
           CICLE_v10019256mg [Citrus clementina]
          Length = 642

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEMLQ-DVAPNAETLTIVTTTLSNSRNLDHGQQLHCLA 277
           SWN+ IS +   G    A + F EM   DV PN  TL  V   +S    L+ G+ +H  A
Sbjct: 237 SWNVMISGYAQNGQFREAIEMFLEMQNGDVCPNYVTLVSVLPAISRLGALELGKWVHLYA 296

Query: 276 MKFGL-CDHVLLTCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGF 130
            K  +  + +L +  +++YSKCG ++++ ++F  +P RNAIAWS+M+ GF
Sbjct: 297 EKNAIEINDILGSALIDMYSKCGSIENAIQVFERIPQRNAIAWSAMIGGF 346


>ref|XP_006659839.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Oryza brachyantha]
          Length = 589

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 45/113 (39%), Positives = 69/113 (61%), Gaps = 5/113 (4%)
 Frame = -2

Query: 453 SWNIYISFH--NSKGNDVVATQRFNEMLQD--VAPNAETLTIVTTTLSNSRNLDHGQQLH 286
           SWN  ++ +  NS+ +D  A + F  M++D  V PNA TL+ V    SN   L  GQQ+H
Sbjct: 183 SWNAVVAGYVKNSQADD--ALRLFRTMVRDANVQPNASTLSSVLLGCSNLSALGFGQQIH 240

Query: 285 CLAMKFGLCDHVLL-TCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGF 130
              MK  L  ++ + T  +++Y KCGDL S+ KLF E+  R+ +AW++M+SG+
Sbjct: 241 QRCMKLPLIRNLTVGTSLVSMYCKCGDLSSACKLFGEMRTRDVVAWNAMISGY 293


>ref|XP_006356287.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565379764|ref|XP_006356288.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565379766|ref|XP_006356289.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X3 [Solanum tuberosum]
           gi|565379768|ref|XP_006356290.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X4 [Solanum tuberosum]
           gi|565379770|ref|XP_006356291.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X5 [Solanum tuberosum]
          Length = 1028

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 34/110 (30%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEMLQ-DVAPNAETLTIVTTTLSNSRNLDHGQQLHCLA 277
           +WN+ IS H   G +V A Q F +M++  + P   TL  V + +++  NL  G Q+H LA
Sbjct: 296 AWNVMISGHAKGGKEVEAIQFFQDMIKASIRPTRSTLGSVLSAVASVANLSFGLQVHALA 355

Query: 276 MKFGLCDHVLL-TCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGF 130
           +K GL  +V + +  +N+Y+KC  +++++++F  +  +N + W+++++G+
Sbjct: 356 VKQGLESNVYVGSSLINMYAKCQKMEAASEIFNSLGEKNEVLWNALLAGY 405



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/110 (27%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
 Frame = -2

Query: 453 SWNIYISFHNSKGNDVVATQRFNEM-LQDVAPNAETLTIVTTTLSNSRNLDHGQQLHCLA 277
           SWN  I  +     +  A   F++M L+ + P+   L  V +  +N  +L+ G+Q+H L 
Sbjct: 498 SWNAIIVGYVQDEEEEEAFIMFHKMTLERIIPDEACLASVLSACANIHDLNKGKQVHSLL 557

Query: 276 MKFGLCDHVLL-TCFLNLYSKCGDLDSSTKLFTEVPHRNAIAWSSMMSGF 130
           +K+GL   +   +  +++Y KCG++ S++++F  +P R+ ++ ++++SG+
Sbjct: 558 VKYGLESGLFAGSSLVDMYCKCGNITSASEVFFCLPDRSVVSTNALISGY 607