BLASTX nr result
ID: Rheum21_contig00036812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00036812
(322 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509827.1| conserved hypothetical protein [Ricinus comm... 79 6e-13
ref|XP_002315534.1| predicted protein [Populus trichocarpa] 72 6e-11
ref|XP_002330315.1| predicted protein [Populus trichocarpa] 69 9e-10
ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610... 68 1e-09
ref|XP_002515332.1| conserved hypothetical protein [Ricinus comm... 66 4e-09
gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group] 65 9e-09
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 65 9e-09
gb|ABA98602.2| retrotransposon protein, putative, unclassified [... 64 2e-08
ref|XP_002336774.1| predicted protein [Populus trichocarpa] 64 3e-08
gb|EEC78788.1| hypothetical protein OsI_19034 [Oryza sativa Indi... 64 3e-08
ref|XP_002333429.1| predicted protein [Populus trichocarpa] 63 4e-08
ref|XP_002332257.1| predicted protein [Populus trichocarpa] 63 4e-08
ref|NP_001159320.1| uncharacterized protein LOC100304412 [Zea ma... 63 5e-08
ref|XP_002337260.1| predicted protein [Populus trichocarpa] 63 5e-08
gb|ABA95357.2| retrotransposon protein, putative, unclassified [... 63 5e-08
emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group] 63 5e-08
gb|ABA97402.1| retrotransposon protein, putative, unclassified [... 62 6e-08
gb|EEE62873.1| hypothetical protein OsJ_17676 [Oryza sativa Japo... 62 6e-08
gb|AAT78770.1| putative retrotransposon gag protein [Oryza sativ... 62 8e-08
gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group] 62 1e-07
>ref|XP_002509827.1| conserved hypothetical protein [Ricinus communis]
gi|223549726|gb|EEF51214.1| conserved hypothetical
protein [Ricinus communis]
Length = 208
Score = 79.0 bits (193), Expect = 6e-13
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Frame = +2
Query: 8 RNSSPNPRLSNANRISVTTTSLSSDPSH----SWSGDTRGGNLRFPKLEFPIFDGCKPRS 175
R P+P + N N T + + +W+ R PK+E F+G PR
Sbjct: 64 RGILPSPSIINRNINGQTRPQIGQSAAEFGQTNWNSSFGSMGGRIPKVELSHFEGNNPRL 123
Query: 176 WVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFLLQKPEVSW 316
W++KCE+YF+++ +P+ QK++IA++Y+ RAD W QG+ Q W
Sbjct: 124 WIKKCEKYFQLYSIPNEQKIDIASLYLGDRADIWYQGWQAQTRSSDW 170
>ref|XP_002315534.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +2
Query: 86 SHSWSGDTRGGNLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGR 265
S+SW G P++EF F G PRSW+R C +YFK+ +P Q VEI +MY+ GR
Sbjct: 30 SNSWDGHRGSHTTPLPRMEFTTFQGENPRSWIRICRKYFKLHLIPVNQWVEITSMYLEGR 89
Query: 266 ADTWLQGFLLQKPE-VSWLE 322
+ W +G + E V W E
Sbjct: 90 VEVWFEGLMASNGEMVIWEE 109
>ref|XP_002330315.1| predicted protein [Populus trichocarpa]
Length = 528
Score = 68.6 bits (166), Expect = 9e-10
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +2
Query: 113 GGNLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFL 292
G N+ P++E P F G PR W+RKC +YFK+ +P Q VE+ + Y+ G+AD W +G +
Sbjct: 121 GYNIPLPRVELPTFRGENPRGWLRKCRKYFKMNTIPAHQWVEVVSYYLKGKADIWFEGLI 180
Query: 293 LQKPEVSWLE 322
+ SW++
Sbjct: 181 --RENESWMD 188
>ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610887 [Citrus sinensis]
Length = 1274
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = +2
Query: 74 SSDPSHSWSGDTRG---GNLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIA 244
SS P +G G +RF KL FP F+G P WV KCER+FK GV ++ V +A
Sbjct: 63 SSIPIKPRTGSNPGMYNSQMRFSKLNFPTFEGENPSGWVYKCERFFKYNGVEESDMVGLA 122
Query: 245 AMYVNGRADTWLQGFLLQKPEVSW 316
+++ G+A W QG+ + E SW
Sbjct: 123 TIHLEGKALEWFQGYEVAVAEPSW 146
>ref|XP_002515332.1| conserved hypothetical protein [Ricinus communis]
gi|223545812|gb|EEF47316.1| conserved hypothetical
protein [Ricinus communis]
Length = 171
Score = 66.2 bits (160), Expect = 4e-09
Identities = 25/62 (40%), Positives = 41/62 (66%)
Frame = +2
Query: 131 PKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFLLQKPEV 310
PKL+FP FDG R W++KC +YF +PD QKV++A++ + +A+ W+ +L+ + V
Sbjct: 33 PKLKFPKFDGSNLRQWIKKCCKYFVFCKIPDKQKVDLASLNMVDKAENWVSSYLINRTAV 92
Query: 311 SW 316
W
Sbjct: 93 DW 94
>gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 2108
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/69 (43%), Positives = 40/69 (57%)
Frame = +2
Query: 110 RGGNLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGF 289
+G N R PKL+FP FDG P+SW +CE YF ++G V IA +Y GRA +WL+
Sbjct: 875 QGFNHRLPKLDFPQFDGSDPQSWRMRCEHYFGVYGTHPNLWVRIATIYFMGRAASWLRSS 934
Query: 290 LLQKPEVSW 316
+ V W
Sbjct: 935 RAHEVFVDW 943
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 65.1 bits (157), Expect = 9e-09
Identities = 25/66 (37%), Positives = 42/66 (63%)
Frame = +2
Query: 125 RFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFLLQKP 304
R ++FP F+G P SW+RK E+YF ++ P+ KV +A ++++GRAD W++ +
Sbjct: 286 RSRNVDFPTFEGDYPESWIRKAEKYFSLYQTPEEDKVLLAEVHISGRADQWIESSAVPTA 345
Query: 305 EVSWLE 322
+SW E
Sbjct: 346 SLSWPE 351
>gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2202
Score = 63.9 bits (154), Expect = 2e-08
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +2
Query: 104 DTRGGNLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQ 283
+ RG N R PKL+FP FDG P++W +CE YF ++G V +A +Y GRA +WL+
Sbjct: 449 EDRGYNHRVPKLDFPQFDGVDPQNWRMRCEHYFGVYGTHPILWVRVATIYFTGRAASWLR 508
>ref|XP_002336774.1| predicted protein [Populus trichocarpa]
Length = 183
Score = 63.5 bits (153), Expect = 3e-08
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = +2
Query: 119 NLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFL 292
++ P++E F G PR W+RKC++YF+I +P Q VE+ + Y+ G+AD W +GF+
Sbjct: 38 HIPLPRMELSTFRGEDPRGWLRKCKKYFRIHSIPVHQWVEMVSYYLEGKADVWFEGFV 95
>gb|EEC78788.1| hypothetical protein OsI_19034 [Oryza sativa Indica Group]
Length = 557
Score = 63.5 bits (153), Expect = 3e-08
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +2
Query: 137 LEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFLLQKPEVSW 316
++FP F+G P SW+RK ++YF ++ P+ KV +A ++++GRAD W++ + +SW
Sbjct: 272 VDFPTFEGDYPESWIRKAKKYFSLYQTPEEDKVLLAEVHISGRADQWIESSAIATASLSW 331
Query: 317 LE 322
E
Sbjct: 332 PE 333
>ref|XP_002333429.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 63.2 bits (152), Expect = 4e-08
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +2
Query: 113 GGNLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFL 292
G ++ P++E F G PR W+RKC++YF+I +P Q +E+ + Y+ G+AD W +G +
Sbjct: 10 GFHIPLPRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLV 69
>ref|XP_002332257.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 63.2 bits (152), Expect = 4e-08
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +2
Query: 113 GGNLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFL 292
G ++ P++E F G PR W+RKC++YF+I +P Q +E+ + Y+ G+AD W +G +
Sbjct: 10 GFHIPLPRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLV 69
>ref|NP_001159320.1| uncharacterized protein LOC100304412 [Zea mays]
gi|223943397|gb|ACN25782.1| unknown [Zea mays]
Length = 725
Score = 62.8 bits (151), Expect = 5e-08
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = +2
Query: 125 RFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFLLQKP 304
+ PKL FPIFDG PR W+ +CE YF ++ V V++A+MY+ W Q ++P
Sbjct: 170 KLPKLPFPIFDGDNPRLWIYRCESYFDMYEVEPEAWVKVASMYLAPHVACWFQSVERKQP 229
Query: 305 EVSW 316
+SW
Sbjct: 230 RLSW 233
>ref|XP_002337260.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 62.8 bits (151), Expect = 5e-08
Identities = 23/58 (39%), Positives = 39/58 (67%)
Frame = +2
Query: 119 NLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFL 292
N FP+++ F G PR W+R+C ++FK+ P Q VEIA++Y+ G+A+ W +G++
Sbjct: 100 NTGFPRMDLTTFRGDNPRGWLRRCNKFFKLNATPWQQWVEIASLYLEGKAEIWFEGYM 157
>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2811
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = +2
Query: 92 SWSGDTRGGNLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRAD 271
S + RG N R PKL+FP FDG P++W +CE YF ++G V +A +Y GRA
Sbjct: 1546 SGGSEGRGYNHRLPKLDFPQFDGSDPQNWRLRCEHYFGVYGTHPDLWVRVATIYFIGRAA 1605
Query: 272 TWLQ 283
+WL+
Sbjct: 1606 SWLR 1609
>emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
Length = 1265
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = +2
Query: 92 SWSGDTRGGNLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRAD 271
S + RG N R PKL+FP FDG P++W +CE YF ++G V +A +Y GRA
Sbjct: 174 SGGSEGRGYNHRLPKLDFPQFDGSDPQNWRLRCEHYFGVYGTHPDLWVRVATIYFIGRAA 233
Query: 272 TWLQ 283
+WL+
Sbjct: 234 SWLR 237
>gb|ABA97402.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 692
Score = 62.4 bits (150), Expect = 6e-08
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 125 RFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFLLQKP 304
R ++FP F+G SW+RK E+YF ++ P+ KV +A ++++GRAD W++ +
Sbjct: 186 RSRNVDFPTFEGDYLESWIRKAEKYFSLYQTPEEDKVLLAEVHISGRADQWIESLAIATA 245
Query: 305 EVSWLE 322
+SW E
Sbjct: 246 SLSWPE 251
>gb|EEE62873.1| hypothetical protein OsJ_17676 [Oryza sativa Japonica Group]
Length = 463
Score = 62.4 bits (150), Expect = 6e-08
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 125 RFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFLLQKP 304
R ++FP F+G SW+RK E+YF ++ P+ KV +A ++++GRAD W++ +
Sbjct: 186 RSRNVDFPTFEGDYLESWIRKAEKYFSLYQTPEEDKVLLAEVHISGRADQWIESLAIATA 245
Query: 305 EVSWLE 322
+SW E
Sbjct: 246 SLSWPE 251
>gb|AAT78770.1| putative retrotransposon gag protein [Oryza sativa Japonica Group]
gi|108709720|gb|ABF97515.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 748
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/68 (42%), Positives = 35/68 (51%)
Frame = +2
Query: 119 NLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGFLLQ 298
N R PKL+FPIFDG P+ W KCE YF + V IA +Y GRA +WL
Sbjct: 203 NHRMPKLDFPIFDGSDPQDWRMKCEHYFDVCDTSPNPWVRIATIYFRGRAASWLHSSRAH 262
Query: 299 KPEVSWLE 322
+ W E
Sbjct: 263 VCYLGWAE 270
>gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1263
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/69 (40%), Positives = 39/69 (56%)
Frame = +2
Query: 110 RGGNLRFPKLEFPIFDGCKPRSWVRKCERYFKIFGVPDAQKVEIAAMYVNGRADTWLQGF 289
+G N R PKL+FP FDG P+ W +CE YF ++G V +A +Y GRA +WL+
Sbjct: 175 QGFNHRLPKLDFPQFDGSDPQGWRLRCEHYFGVYGTHPNLWVWVATIYFMGRAASWLRSS 234
Query: 290 LLQKPEVSW 316
+ V W
Sbjct: 235 RAHEVFVDW 243