BLASTX nr result
ID: Rheum21_contig00036748
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00036748
(597 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669... 91 2e-16
gb|ADN34143.1| copia-type polyprotein [Cucumis melo subsp. melo] 82 1e-13
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 76 8e-12
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 76 8e-12
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 75 1e-11
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 75 1e-11
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] 74 3e-11
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 74 3e-11
ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665... 74 4e-11
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 72 9e-11
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 72 1e-10
gb|ABW74566.1| integrase [Boechera divaricarpa] 66 6e-09
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 64 2e-08
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 61 2e-07
emb|CAN81437.1| hypothetical protein VITISV_001281 [Vitis vinifera] 56 8e-06
>ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669657 [Glycine max]
Length = 711
Score = 91.3 bits (225), Expect = 2e-16
Identities = 66/194 (34%), Positives = 100/194 (51%), Gaps = 2/194 (1%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TILNM RSM+ +KKMP+EF EA CAVYL+NR PT+S+ + + + IS +
Sbjct: 510 TILNMVRSMLKSKKMPKEFWAEAVACAVYLTNRSPTRSVHEKTPQEAWSGRKPGISHLKV 569
Query: 416 QEHWLCTRLISAKIKA*RQKQENFLH-*YD*ASKGYKLYDPVARKVVNSIYVQFDEEDAW 240
T + K K E ++ YD SKGYKLY+P +RK+V S V+FDEED W
Sbjct: 570 FGSIAYTHVPDEKRTKLDDKSEKYVFVGYDSRSKGYKLYNPNSRKIVISRDVEFDEEDCW 629
Query: 239 NRSLVDNERYEVFLIFTGEEQ-KEDVCQKPTTHCAXXXXXXXXXXXXXXXXXXHRLPMEF 63
+ S V ++Y+ F +++ ++ + ++ T A
Sbjct: 630 DWS-VQEDKYDFLPYFEEDDEIEQPIIEEHITPPASLTPRLD--------------ETSS 674
Query: 62 QEKEPKMRNLEEIY 21
E+ P++R++EEIY
Sbjct: 675 SERTPRLRSIEEIY 688
>gb|ADN34143.1| copia-type polyprotein [Cucumis melo subsp. melo]
Length = 238
Score = 82.0 bits (201), Expect = 1e-13
Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TILNMARSM+ +KKMP+EF +A CA+YLSNR PT+SL + + + I+ +
Sbjct: 61 TILNMARSMLKSKKMPKEFWAQAVKCAMYLSNRSPTRSLWNKTPQKAWTGRKPSIAHLRV 120
Query: 416 QEHWLCTRLISAKIKA*RQKQENFLH*-YD*ASKGYKLYDPVARKVVNSIYVQFDEEDAW 240
+ K K E + YD +SK YKLY+P+ +K + S V FDEE +W
Sbjct: 121 FGCMAYAHIPYQKRSKLDDKSEKCVFVGYDASSKDYKLYNPITKKTIVSRDVVFDEEASW 180
Query: 239 NRSLVDNERYEVFLIFTGEEQKEDVCQKPTT 147
N + + E Y+ L ++ D+ TT
Sbjct: 181 NWN-DEPEDYKFLLFPEDHDEPTDIASPSTT 210
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 75.9 bits (185), Expect = 8e-12
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TIL MARSM+ +K++P+E EA CAVYL NR PTKS+ + + + +S +
Sbjct: 637 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRV 696
Query: 416 QEHWLCTRLISAKIKA*RQKQENFLH-*YD*ASKGYKLYDPVARKVVNSIYVQFDEEDAW 240
+ K K E ++ YD SKGYKLY+P +K + S + FDEE W
Sbjct: 697 FGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 756
Query: 239 NRSLVDNERYEVFLIFTGEE----QKEDVCQKPTTHCAXXXXXXXXXXXXXXXXXXHRLP 72
+ + + E Y F F +E ++E ++PTT ++
Sbjct: 757 DWN-SNEEDYNFFPHFEEDEPEPTREEPPSEEPTT--------------PPTSPTSSQIE 801
Query: 71 MEFQEKEPKMRNLEEIY 21
E+ P+ R+++E+Y
Sbjct: 802 ESSSERTPRFRSIQELY 818
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 75.9 bits (185), Expect = 8e-12
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TIL MARSM+ +K++P+E EA CAVYL NR PTKS+ + + + +S +
Sbjct: 576 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 635
Query: 416 QEHWLCTRLISAKIKA*RQKQENFLH-*YD*ASKGYKLYDPVARKVVNSIYVQFDEEDAW 240
+ K K E ++ YD SKGYKLY+P +K + S + FDEE W
Sbjct: 636 FGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 695
Query: 239 NRSLVDNERYEVFLIFTGEE----QKEDVCQKPTTHCAXXXXXXXXXXXXXXXXXXHRLP 72
+ + + E Y F F +E ++E ++PTT ++
Sbjct: 696 DWN-SNEEDYNFFPHFEEDEPEPTREEPPSEEPTTR--------------PTSLTSSQIE 740
Query: 71 MEFQEKEPKMRNLEEIY 21
E+ P+ R+++E+Y
Sbjct: 741 ESSSERTPRFRSIQELY 757
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 75.5 bits (184), Expect = 1e-11
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TIL MARSM+ +K++P+E EA CAVYL NR PTKS+ + + + +S +
Sbjct: 637 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 696
Query: 416 QEHWLCTRLISAKIKA*RQKQENFLH-*YD*ASKGYKLYDPVARKVVNSIYVQFDEEDAW 240
+ K K E ++ YD SKGYKLY+P +K + S + FDEE W
Sbjct: 697 FGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 756
Query: 239 NRSLVDNERYEVFLIFTGEE----QKEDVCQKPTTHCAXXXXXXXXXXXXXXXXXXHRLP 72
+ + + E Y F F +E ++E ++PTT ++
Sbjct: 757 DWN-SNEEDYNFFPHFEEDEPEPTREEPPSEEPTT--------------PPTSPTSSQIE 801
Query: 71 MEFQEKEPKMRNLEEIY 21
E+ P+ R+++E+Y
Sbjct: 802 ESSSERTPRFRSIQELY 818
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 75.5 bits (184), Expect = 1e-11
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TIL MARSM+ +K++P+E EA CAVYL NR PTKS+ + + + +S +
Sbjct: 637 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 696
Query: 416 QEHWLCTRLISAKIKA*RQKQENFLH-*YD*ASKGYKLYDPVARKVVNSIYVQFDEEDAW 240
+ K K E ++ YD SKGYKLY+P +K + S + FDEE W
Sbjct: 697 FGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 756
Query: 239 NRSLVDNERYEVFLIFTGEE----QKEDVCQKPTTHCAXXXXXXXXXXXXXXXXXXHRLP 72
+ + + E Y F F +E ++E ++PTT ++
Sbjct: 757 DWN-SNEEDYNFFPHFEEDEPEPTREEPPSEEPTT--------------PPTSPTSSQIE 801
Query: 71 MEFQEKEPKMRNLEEIY 21
E+ P+ R+++E+Y
Sbjct: 802 ESSSERTPRFRSIQELY 818
>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 623
Score = 73.9 bits (180), Expect = 3e-11
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TIL MARSM+ +K++P+E EA CAVYL NR PTKS+ + + + +S +
Sbjct: 134 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 193
Query: 416 QEHWLCTRLISAKIKA*RQKQENFLH-*YD*ASKGYKLYDPVARKVVNSIYVQFDEEDAW 240
+ K K E ++ YD SKGYKLY+P +K + S + FDEE W
Sbjct: 194 FGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 253
Query: 239 NRSLVDNERYEVFLIFTGEE----QKEDVCQKPTTHCAXXXXXXXXXXXXXXXXXXHRLP 72
+ + + E Y F F ++ ++E ++PTT ++
Sbjct: 254 DWN-SNEEDYNFFPHFEEDKPEPTREEPPSEEPTT--------------PPTSPTSSQIE 298
Query: 71 MEFQEKEPKMRNLEEIY 21
E+ P+ R+++E+Y
Sbjct: 299 ESSSERTPRFRSIQELY 315
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 73.9 bits (180), Expect = 3e-11
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TIL MARSM+ +K++P+E EA CAVYL NR PTKS+ + + + +S +
Sbjct: 637 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 696
Query: 416 QEHWLCTRLISAKIKA*RQKQENFLH-*YD*ASKGYKLYDPVARKVVNSIYVQFDEEDAW 240
+ K K E ++ YD SKGYKLY+P +K + S + FDEE W
Sbjct: 697 FGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 756
Query: 239 NRSLVDNERYEVFLIFTGEE----QKEDVCQKPTTHCAXXXXXXXXXXXXXXXXXXHRLP 72
+ + + E Y F F ++ ++E ++PTT ++
Sbjct: 757 DWN-SNEEDYNFFPHFEEDKPEPTREEPPSEEPTT--------------PPTSPTSSQIE 801
Query: 71 MEFQEKEPKMRNLEEIY 21
E+ P+ R+++E+Y
Sbjct: 802 ESSSERTPRFRSIQELY 818
>ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665857 [Glycine max]
Length = 678
Score = 73.6 bits (179), Expect = 4e-11
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TILNM RSM+ +KKM +EF +A CAVYL+N T+S+ + + + IS +
Sbjct: 554 TILNMVRSMLKSKKMLKEFWAKAVACAVYLTNCSLTRSVHEKTPQEAWSGRKPGISHLKV 613
Query: 416 QEHWLCTRLISAKIKA*RQKQENFLH*-YD*ASKGYKLYDPVARKVVNSIYVQFDEEDAW 240
T + K K E ++ YD SKGYKLY+P +RK+V S V+FDEED W
Sbjct: 614 FGSIAYTHVPDEKRTKLDDKSEKYVFVGYDSRSKGYKLYNPNSRKIVISRDVEFDEEDCW 673
Query: 239 NRSL 228
+ S+
Sbjct: 674 DWSV 677
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 72.4 bits (176), Expect = 9e-11
Identities = 53/155 (34%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TIL MARSM+ +K++P+E EA CAVYL NR PTKS+ + + + +S +
Sbjct: 637 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 696
Query: 416 QEHWLCTRLISAKIKA*RQKQENFLH-*YD*ASKGYKLYDPVARKVVNSIYVQFDEEDAW 240
+ K K E ++ YD SKGYKLY+P +K + S + FDEE W
Sbjct: 697 FGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 756
Query: 239 NRSLVDNERYEVFLIFTGEE----QKEDVCQKPTT 147
+ + + E Y F F ++ ++E ++PTT
Sbjct: 757 DWN-SNEEDYNFFPHFEEDKPEPTREEPPSEEPTT 790
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 71.6 bits (174), Expect = 1e-10
Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLL----TE*YRSIERKKAKCIS 429
TILNM R M+ K MP+EF EA CAVYLSNR PTK++ E + ++ +
Sbjct: 328 TILNMTRCMLKAKNMPKEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSGVKPRVDHLRV 387
Query: 428 FDSIQEHWLCTRLISAKIKA*RQKQENFLH*YD*ASKGYKLYDPVARKVVNSIYVQFDEE 249
F SI + + + K + +++ YD +SKGYKLY+P K + S V+F EE
Sbjct: 388 FGSIAYAHVPDQ---GRFKLDDRSEKHVFIGYDASSKGYKLYNPNNGKTIVSRDVEFYEE 444
Query: 248 DAWN 237
WN
Sbjct: 445 GTWN 448
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 66.2 bits (160), Expect = 6e-09
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCIS---- 429
T++ MARSM+ + +P +F E+ AVYL N PTK++L + +S
Sbjct: 449 TVVEMARSMLKERNLPNQFWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRV 508
Query: 428 FDSIQEHWLCTRLISA--KIKA*RQKQENFLH*YD*ASKGYKLYDPVARKVVNSIYVQFD 255
F S+ C LI A + K + ++ Y SKGY+LY+PV+ K+V S V FD
Sbjct: 509 FGSV-----CYSLIDAHNRKKLDEKSEKCIFLGYCSQSKGYRLYNPVSGKIVESRNVTFD 563
Query: 254 EEDAWNRSLVDNERYEVFLIFTGEEQKED 168
EE W DN E+ IF +EQ+E+
Sbjct: 564 EEAVWTWREGDNG--ELVEIFVNDEQEEN 590
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 64.3 bits (155), Expect = 2e-08
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TI+ MARSM+ K +P EF +A C VY+ NR PTKS+ + +A C S+
Sbjct: 597 TIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSV-----PGMTPYEAWCDEKPSV 651
Query: 416 QEHWLCTRLISAKI------KA*RQKQENFLH*YD*ASKGYKLYDPVARKVVNSIYVQFD 255
+ + + I K + ++ + Y+ SK Y+LY+PV+RK++ + V F
Sbjct: 652 SHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVSRKIIINRDVIFS 711
Query: 254 EEDAWN 237
E+++WN
Sbjct: 712 EDESWN 717
>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 61.2 bits (147), Expect = 2e-07
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Frame = -2
Query: 593 ILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLL----TE*YRSIERKKAK---- 438
I+ +ARSM+ KK+P +F +A CAVYL NR TKS+ E + ++ +
Sbjct: 607 IMELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAWSGLKPTVSHLRVF 666
Query: 437 -CISFDSIQEHWLCTRLISAKIKA*RQKQENFLH*YD*ASKGYKLYDPVARKVVNSIYVQ 261
CI++ I + + K + ++ Y SK Y+LY+P+++KV+ S V+
Sbjct: 667 GCIAYSHISD--------EKRGKLDDKSEKCIFVGYSENSKAYRLYNPISKKVIISRDVK 718
Query: 260 FDEEDAWNRSLVDNERYEVFLIFTGEEQKEDV 165
FDE W + + ++ + + G++ D+
Sbjct: 719 FDEAKLWQWNAPNEDQNPLHIDMDGKKDARDL 750
>emb|CAN81437.1| hypothetical protein VITISV_001281 [Vitis vinifera]
Length = 1008
Score = 55.8 bits (133), Expect = 8e-06
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 28/181 (15%)
Frame = -2
Query: 596 TILNMARSMVITKKMPREF*DEATDCAVYLSNRCPTKSLLTE*YRSIERKKAKCISFDSI 417
TILNM RS++ K+P+ EA + ++++ NRCPT S+ + + I
Sbjct: 465 TILNMVRSLLARGKIPKXLWPEAVNWSIHVLNRCPTFSVXNMTLDDAWSGRKPVVDHFKI 524
Query: 416 QEHWLCTRLISAKIKA*RQKQEN--FLH*YD*ASKGYKLYDPVARKVVNSIYVQFDEEDA 243
+ + K K K E FL + ASK YKL++P+ +K+V S +V F EE+
Sbjct: 525 FSCIAYAHVPNEKRKRLDDKGEKCVFLGVSE-ASKAYKLFNPLTKKIVTSRHVIFYEENT 583
Query: 242 --WNRS-----LVDNER-------------------YEVFLIFTGEEQKEDVCQKPTTHC 141
WNR ++D ER YEV TG EQ +D P TH
Sbjct: 584 WDWNRQQPTPVILDEERQQPLQPQIPAAYRPGWMIDYEV----TGIEQSKD----PITHF 635
Query: 140 A 138
A
Sbjct: 636 A 636