BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00036737
         (408 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006489173.1| PREDICTED: chromatin structure-remodeling co...    64   2e-08
ref|XP_006489171.1| PREDICTED: chromatin structure-remodeling co...    64   2e-08
emb|CBI26124.3| unnamed protein product [Vitis vinifera]               56   4e-06

>ref|XP_006489173.1| PREDICTED: chromatin structure-remodeling complex protein SYD-like
            isoform X3 [Citrus sinensis]
          Length = 3604

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
 Frame = -2

Query: 407  GGQKEASRRPLSSAEAQHDLGARKDXXXXXXXSQGLGEVAIQGHQYADSNLSV-----SW 243
            G Q E  RRPL +   QH+L    D        +  G     G+Q+A+S+LS       W
Sbjct: 671  GSQNEVPRRPLPAPTVQHELVKDNDPTQF----KSFGHSGASGNQHANSHLSSFSIRDQW 726

Query: 242  TSMQGLNNQKQRLVPAHDAM-LLRHGPSGT--LSDASHLVR-KNAPFPQMDNTCESEETD 75
              + G ++ +  L+P  DA  +LRH        SD S  +   N+    +  T E +E D
Sbjct: 727  KPVSGTDSDRYSLIPVKDASGMLRHTSQDDPKFSDGSRTIPVDNSVRNGISLTTEQDEED 786

Query: 74   K--FPPVAPPPKYSTSEKWIMIQQKR 3
            K       P PKY+ SEKWIM  QKR
Sbjct: 787  KSLHTDSPPAPKYTMSEKWIMDMQKR 812


>ref|XP_006489171.1| PREDICTED: chromatin structure-remodeling complex protein SYD-like
            isoform X1 [Citrus sinensis]
            gi|568872017|ref|XP_006489172.1| PREDICTED: chromatin
            structure-remodeling complex protein SYD-like isoform X2
            [Citrus sinensis]
          Length = 3610

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
 Frame = -2

Query: 407  GGQKEASRRPLSSAEAQHDLGARKDXXXXXXXSQGLGEVAIQGHQYADSNLSV-----SW 243
            G Q E  RRPL +   QH+L    D        +  G     G+Q+A+S+LS       W
Sbjct: 671  GSQNEVPRRPLPAPTVQHELVKDNDPTQF----KSFGHSGASGNQHANSHLSSFSIRDQW 726

Query: 242  TSMQGLNNQKQRLVPAHDAM-LLRHGPSGT--LSDASHLVR-KNAPFPQMDNTCESEETD 75
              + G ++ +  L+P  DA  +LRH        SD S  +   N+    +  T E +E D
Sbjct: 727  KPVSGTDSDRYSLIPVKDASGMLRHTSQDDPKFSDGSRTIPVDNSVRNGISLTTEQDEED 786

Query: 74   K--FPPVAPPPKYSTSEKWIMIQQKR 3
            K       P PKY+ SEKWIM  QKR
Sbjct: 787  KSLHTDSPPAPKYTMSEKWIMDMQKR 812


>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
 Frame = -2

Query: 407  GGQKEASRRPLSSAEAQHD-LGARKDXXXXXXXSQGLGEVAIQGHQYADSNLSV-----S 246
            G   +ASR  L  +  QH+ L  RKD        Q  G+ ++QG+Q+++++LS       
Sbjct: 613  GNHNDASRGQLPVSAIQHEPLLERKDNTPSQS--QSFGDTSVQGNQHSENHLSPFLLRDH 670

Query: 245  WTSMQGLNNQKQRLVPAHDA-MLLRHGP----------SGTLSDASHLV------RKNAP 117
            W  + G++N   ++    +A +L++H            +  +SD    V      +   P
Sbjct: 671  WKPVSGMDNDHHKIFQTKEANLLIKHVSRDDSKVTEIQTRCISDGCKAVAIDDTTKNGYP 730

Query: 116  FPQMDNTCESEETDK--FPPVAPPPKYSTSEKWIMIQQKR 3
            +  ++ + E  + D+     + P PK +TSEKWIM QQKR
Sbjct: 731  YKMVEKSAEQGDEDRPMLVNLPPSPKCTTSEKWIMDQQKR 770