BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00036673
         (287 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772...   171   1e-40
ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752...   171   1e-40
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   165   5e-39
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       165   7e-39
ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759...   165   7e-39
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     165   7e-39
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni...   165   7e-39
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   165   7e-39
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         164   9e-39
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]         164   1e-38
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   163   2e-38
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   163   2e-38
emb|CAN73562.1| hypothetical protein VITISV_016481 [Vitis vinifera]   162   6e-38
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   161   9e-38
ref|XP_006574037.1| PREDICTED: uncharacterized protein LOC102666...   160   1e-37
ref|XP_006484321.1| PREDICTED: uncharacterized protein LOC102617...   160   1e-37
gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subc...   160   2e-37
gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Jap...   160   2e-37
gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Ja...   160   2e-37
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...   160   2e-37

>ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772114 [Setaria italica]
          Length = 1246

 Score =  171 bits (432), Expect = 1e-40
 Identities = 77/95 (81%), Positives = 90/95 (94%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL++FKDVFPDE+P GLPP+RGIEH IDL+P A+LPNRPAYR NP+ET+EIQ QV+ELL+
Sbjct: 630 LLQDFKDVFPDEVPAGLPPLRGIEHQIDLVPGASLPNRPAYRTNPEETKEIQQQVKELLD 689

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPCA+PVLLVPKKDG+WRMCVDCRAIN
Sbjct: 690 KGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAIN 724


>ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752491 [Setaria italica]
          Length = 1295

 Score =  171 bits (432), Expect = 1e-40
 Identities = 77/95 (81%), Positives = 90/95 (94%)
 Frame = +3

Query: 3    LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
            LL++FKDVFPDE+P GLPP+RGIEH IDL+P A+LPNRPAYR NP+ET+EIQ QV+ELL+
Sbjct: 753  LLQDFKDVFPDEVPAGLPPLRGIEHQIDLVPGASLPNRPAYRTNPEETKEIQQQVKELLD 812

Query: 183  KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
            KG+VRESLSPCA+PVLLVPKKDG+WRMCVDCRAIN
Sbjct: 813  KGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAIN 847


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|15217296|gb|AAK92640.1|AC079634_1 Putative
           retroelement [Oryza sativa Japonica Group]
           gi|31431373|gb|AAP53161.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1708

 Score =  165 bits (418), Expect = 5e-39
 Identities = 76/95 (80%), Positives = 87/95 (91%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL+E+ D+FP E+PPGLPPIRGIEH IDLIP A+LPNR  YR NP+ET+EIQ QVQELL+
Sbjct: 712 LLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLD 771

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPC+IPVLLVPKKDG+WRMCVDCRAIN
Sbjct: 772 KGYVRESLSPCSIPVLLVPKKDGSWRMCVDCRAIN 806


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  165 bits (417), Expect = 7e-39
 Identities = 75/95 (78%), Positives = 87/95 (91%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL+E+ D+FP E+PPGLPPIRGIEH IDLIP A+LPNR  YR NP+ET+EIQ QVQELL+
Sbjct: 712 LLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLD 771

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPC++PVLLVPKKDG+WRMCVDCRAIN
Sbjct: 772 KGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAIN 806


>ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759439 [Setaria italica]
          Length = 696

 Score =  165 bits (417), Expect = 7e-39
 Identities = 75/95 (78%), Positives = 87/95 (91%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL+E+ D+FP+E+PPGLPP RGIEH IDLIP A+LPNR  YR NP+ET+EIQ QVQELL+
Sbjct: 319 LLQEYADIFPNEVPPGLPPTRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLD 378

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPCA+PVLLVPKKDG+WRMCVDCRAIN
Sbjct: 379 KGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAIN 413


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  165 bits (417), Expect = 7e-39
 Identities = 75/95 (78%), Positives = 88/95 (92%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           +L+E++DVFP+E P GLPP+RGIEH IDLIP ATLPNRPAYR NP+ET+EIQ QVQ LL+
Sbjct: 687 VLQEYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLD 746

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPCA+PV+LVPKKDG+WRMCVDCRAIN
Sbjct: 747 KGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAIN 781


>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  165 bits (417), Expect = 7e-39
 Identities = 75/95 (78%), Positives = 87/95 (91%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL+E+ D+FP E+PPGLPPIRGIEH IDLIP A+LPNR  YR NP+ET+EIQ QVQELL+
Sbjct: 608 LLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLD 667

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPC++PVLLVPKKDG+WRMCVDCRAIN
Sbjct: 668 KGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAIN 702


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1616

 Score =  165 bits (417), Expect = 7e-39
 Identities = 75/95 (78%), Positives = 87/95 (91%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL+E+ D+FP E+PPGLPPIRGIEH IDLIP A+LPNR  YR NP+ET+EIQ QVQELL+
Sbjct: 712 LLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLD 771

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPC++PVLLVPKKDG+WRMCVDCRAIN
Sbjct: 772 KGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAIN 806


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  164 bits (416), Expect = 9e-39
 Identities = 76/95 (80%), Positives = 86/95 (90%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           +L+E+ DVFP EIP GLPPIRGIEH IDLIP A+LPNR  YR NP+ET+EIQ QVQELL+
Sbjct: 687 ILQEYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLD 746

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPCA+PV+LVPKKDGTWRMCVDCRAIN
Sbjct: 747 KGYVRESLSPCAVPVILVPKKDGTWRMCVDCRAIN 781


>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
          Length = 1170

 Score =  164 bits (414), Expect = 1e-38
 Identities = 74/95 (77%), Positives = 87/95 (91%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL+E+ D+FP E+PPGLPPIRGIEH IDLIP A+LPNR  YR NP+ET+EIQ Q+QELL+
Sbjct: 345 LLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQMQELLD 404

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPC++PVLLVPKKDG+WRMCVDCRAIN
Sbjct: 405 KGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAIN 439


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
           gi|31431012|gb|AAP52850.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 2447

 Score =  163 bits (412), Expect = 2e-38
 Identities = 73/95 (76%), Positives = 86/95 (90%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           +L+E+ DVFP E+PPGLPP+RGIEH IDLIP A+LPNR  YR NP+ET+EIQ QV ELL+
Sbjct: 684 ILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLD 743

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPCA+PV+LVPKKDG+WRMCVDCRAIN
Sbjct: 744 KGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAIN 778


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  163 bits (412), Expect = 2e-38
 Identities = 73/95 (76%), Positives = 86/95 (90%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           +L+E+ DVFP E+PPGLPP+RGIEH IDLIP A+LPNR  YR NP+ET+EIQ QV ELL+
Sbjct: 663 ILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLD 722

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPCA+PV+LVPKKDG+WRMCVDCRAIN
Sbjct: 723 KGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAIN 757


>emb|CAN73562.1| hypothetical protein VITISV_016481 [Vitis vinifera]
          Length = 776

 Score =  162 bits (409), Expect = 6e-38
 Identities = 71/93 (76%), Positives = 86/93 (92%)
 Frame = +3

Query: 9   EEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLEKG 188
           +E++DVFP+++P GLPPIRGIEH I+ +P AT+PNRPAYR NP+ET+E+Q QV+ELL KG
Sbjct: 560 KEYEDVFPNDVPSGLPPIRGIEHQINFVPGATIPNRPAYRSNPEETKELQRQVEELLTKG 619

Query: 189 HVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           HVRESLSPCA+PVLLVPKKDGTWRMCVDC+AIN
Sbjct: 620 HVRESLSPCAVPVLLVPKKDGTWRMCVDCKAIN 652


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  161 bits (407), Expect = 9e-38
 Identities = 75/95 (78%), Positives = 83/95 (87%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL EF DVFP+E+P GLPPIRGIEH IDLIP A+LPNRPAYR NP E +EIQ QV ELL+
Sbjct: 627 LLSEFADVFPEELPKGLPPIRGIEHQIDLIPGASLPNRPAYRTNPDEAKEIQRQVDELLQ 686

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
            G ++ESLSPCA+PVLLVPKKDGTWRMCVDCRAIN
Sbjct: 687 AGFIQESLSPCAVPVLLVPKKDGTWRMCVDCRAIN 721


>ref|XP_006574037.1| PREDICTED: uncharacterized protein LOC102666885 [Glycine max]
          Length = 616

 Score =  160 bits (406), Expect = 1e-37
 Identities = 74/95 (77%), Positives = 84/95 (88%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL EF D+FP EIP GLPP+RGIEH IDL+P  +LPNRPAYR NP+ET+EI+ QV+ELLE
Sbjct: 281 LLHEFGDIFPKEIPHGLPPLRGIEHQIDLVPGESLPNRPAYRTNPQETKEIESQVKELLE 340

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG V+ESLSPCA+PVLLVPKKDGTWRMC DCRAIN
Sbjct: 341 KGWVQESLSPCALPVLLVPKKDGTWRMCTDCRAIN 375



 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 46/78 (58%), Positives = 58/78 (74%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           L +EF DV P + P GL P+R IEH IDLI  A+LPN+PAYR N +ET++IQ QV+  +E
Sbjct: 21  LFKEFGDVVPKDTPHGLLPLRMIEHQIDLISGASLPNKPAYRRNLEETKQIQRQVESSME 80

Query: 183 KGHVRESLSPCAIPVLLV 236
           K  VRE LSPCA+ V+LV
Sbjct: 81  KRWVRECLSPCAMFVILV 98


>ref|XP_006484321.1| PREDICTED: uncharacterized protein LOC102617792 [Citrus sinensis]
          Length = 659

 Score =  160 bits (406), Expect = 1e-37
 Identities = 71/93 (76%), Positives = 85/93 (91%)
 Frame = +3

Query: 9   EEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLEKG 188
           ++F DVFP+E+P GLPPIRGIEH ID +P AT+PNRPAYR NP+ET+E+Q QV+ELL KG
Sbjct: 489 KDFDDVFPNEVPNGLPPIRGIEHQIDFVPGATIPNRPAYRSNPEETKELQRQVEELLAKG 548

Query: 189 HVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           +V+ES+SPCA+PVLLVPKKDGTWRMCVDCRAIN
Sbjct: 549 YVKESMSPCAVPVLLVPKKDGTWRMCVDCRAIN 581


>gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1392

 Score =  160 bits (405), Expect = 2e-37
 Identities = 74/95 (77%), Positives = 86/95 (90%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL+E+ D+FP E+P GLPPIRGIEH IDLIP A+LPNR  YR NP+ET+EIQ QVQELL+
Sbjct: 561 LLQEYADIFPKEVPLGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLD 620

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPCA+PVLLVPKKDG+WRMCVDCRAI+
Sbjct: 621 KGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAID 655


>gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1357

 Score =  160 bits (405), Expect = 2e-37
 Identities = 74/95 (77%), Positives = 86/95 (90%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL+E+ D+FP E+P GLPPIRGIEH IDLIP A+LPNR  YR NP+ET+EIQ QVQELL+
Sbjct: 526 LLQEYADIFPKEVPLGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLD 585

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPCA+PVLLVPKKDG+WRMCVDCRAI+
Sbjct: 586 KGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAID 620


>gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1450

 Score =  160 bits (405), Expect = 2e-37
 Identities = 74/95 (77%), Positives = 86/95 (90%)
 Frame = +3

Query: 3   LLEEFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLE 182
           LL+E+ D+FP E+P GLPPIRGIEH IDLIP A+LPNR  YR NP+ET+EIQ QVQELL+
Sbjct: 619 LLQEYADIFPKEVPLGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLD 678

Query: 183 KGHVRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
           KG+VRESLSPCA+PVLLVPKKDG+WRMCVDCRAI+
Sbjct: 679 KGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAID 713


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score =  160 bits (404), Expect = 2e-37
 Identities = 72/92 (78%), Positives = 83/92 (90%)
 Frame = +3

Query: 12   EFKDVFPDEIPPGLPPIRGIEH*IDLIPEATLPNRPAYRMNPKETQEIQGQVQELLEKGH 191
            E+ DVFP E+PPGLPP+RGIEH IDLIP A+LPNR  YR NP+ET+EIQ QV ELL+KG+
Sbjct: 1020 EYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGY 1079

Query: 192  VRESLSPCAIPVLLVPKKDGTWRMCVDCRAIN 287
            VRESLSPCA+PV+LVPKKDG+WRMCVDCRAIN
Sbjct: 1080 VRESLSPCAVPVILVPKKDGSWRMCVDCRAIN 1111