BLASTX nr result
ID: Rheum21_contig00036633
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00036633
(239 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC06808.1| Putative mediator of RNA polymerase II transcript... 135 4e-30
ref|XP_006375342.1| hypothetical protein POPTR_0014s080201g, par... 135 4e-30
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904... 135 4e-30
ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II tra... 134 1e-29
ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II tra... 133 3e-29
gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus pe... 132 5e-29
ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II tra... 131 8e-29
ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citr... 129 3e-28
ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citr... 129 3e-28
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263... 129 3e-28
emb|CBI40380.3| unnamed protein product [Vitis vinifera] 129 3e-28
gb|EOX95959.1| Mediator of RNA polymerase II transcription subun... 127 2e-27
gb|EOX95958.1| Mediator of RNA polymerase II transcription subun... 127 2e-27
gb|EOX95957.1| Mediator of RNA polymerase II transcription subun... 127 2e-27
sp|H3K2Y6.1|MED12_ARATH RecName: Full=Mediator of RNA polymerase... 125 4e-27
ref|XP_004510784.1| PREDICTED: mediator of RNA polymerase II tra... 125 8e-27
ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II tra... 124 1e-26
ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II tra... 124 1e-26
gb|ESW07065.1| hypothetical protein PHAVU_010G099000g [Phaseolus... 123 2e-26
ref|XP_006583297.1| PREDICTED: mediator of RNA polymerase II tra... 123 3e-26
>gb|EXC06808.1| Putative mediator of RNA polymerase II transcription subunit 12
[Morus notabilis]
Length = 2274
Score = 135 bits (341), Expect = 4e-30
Identities = 63/78 (80%), Positives = 73/78 (93%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
L D+VPHGYRK+SLFEV+IRN+VPLLRATWFIKVTYLNQ+RPG + SS T+DK+QLSRT
Sbjct: 187 LVDHVPHGYRKRSLFEVIIRNNVPLLRATWFIKVTYLNQVRPGSVNISSGTSDKAQLSRT 246
Query: 182 ELWTKDVIDYLQYLLDEY 235
ELWTKDVIDYLQ+LLDE+
Sbjct: 247 ELWTKDVIDYLQHLLDEF 264
>ref|XP_006375342.1| hypothetical protein POPTR_0014s080201g, partial [Populus
trichocarpa] gi|550323754|gb|ERP53139.1| hypothetical
protein POPTR_0014s080201g, partial [Populus
trichocarpa]
Length = 1107
Score = 135 bits (341), Expect = 4e-30
Identities = 65/79 (82%), Positives = 72/79 (91%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHGYRKKSL EVLIRN+VPLLRATWFIKVTYLNQ+RP +S SS T DK+Q+SRT
Sbjct: 152 LADHVPHGYRKKSLLEVLIRNNVPLLRATWFIKVTYLNQVRPSSTSISSGTFDKNQVSRT 211
Query: 182 ELWTKDVIDYLQYLLDEYL 238
ELWTKDV+DYLQ LLDEYL
Sbjct: 212 ELWTKDVVDYLQSLLDEYL 230
>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
putative [Ricinus communis]
Length = 2264
Score = 135 bits (341), Expect = 4e-30
Identities = 65/78 (83%), Positives = 72/78 (92%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHGYRKKSLFEVLIRN+VPLLRATWFIKVTYLNQ+RP +S SS T DK+QLSRT
Sbjct: 188 LADHVPHGYRKKSLFEVLIRNNVPLLRATWFIKVTYLNQVRPSSASISSGTPDKTQLSRT 247
Query: 182 ELWTKDVIDYLQYLLDEY 235
ELWTKDVI+YLQ LLDE+
Sbjct: 248 ELWTKDVIEYLQILLDEF 265
>ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Solanum lycopersicum]
Length = 2262
Score = 134 bits (337), Expect = 1e-29
Identities = 61/79 (77%), Positives = 72/79 (91%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHGYR+KSLFEVL+RN+VPLLRATWF+KVTYLNQ+RPG SS SS DK+ +SR+
Sbjct: 184 LADHVPHGYRRKSLFEVLVRNNVPLLRATWFVKVTYLNQVRPGSSSISSGVPDKTHISRS 243
Query: 182 ELWTKDVIDYLQYLLDEYL 238
E WTKDVIDYLQYLLDE++
Sbjct: 244 EQWTKDVIDYLQYLLDEFI 262
>ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Solanum tuberosum]
gi|565344967|ref|XP_006339571.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Solanum tuberosum]
Length = 2262
Score = 133 bits (334), Expect = 3e-29
Identities = 60/79 (75%), Positives = 72/79 (91%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHGYR+KSLFEVL++N+VPLLRATWF+KVTYLNQ+RPG SS SS DK+ +SR+
Sbjct: 184 LADHVPHGYRRKSLFEVLVKNNVPLLRATWFVKVTYLNQVRPGSSSISSGVPDKTHISRS 243
Query: 182 ELWTKDVIDYLQYLLDEYL 238
E WTKDVIDYLQYLLDE++
Sbjct: 244 EQWTKDVIDYLQYLLDEFI 262
>gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus persica]
Length = 2210
Score = 132 bits (332), Expect = 5e-29
Identities = 63/77 (81%), Positives = 69/77 (89%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHGYRK+ LFEVL RN+VPLLRATWFIKVTYLNQ+RPG + SS DK+QLSRT
Sbjct: 187 LADHVPHGYRKRPLFEVLTRNNVPLLRATWFIKVTYLNQVRPGSAIISSGAPDKAQLSRT 246
Query: 182 ELWTKDVIDYLQYLLDE 232
ELWTKDVIDYLQYLLDE
Sbjct: 247 ELWTKDVIDYLQYLLDE 263
>ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Fragaria vesca subsp. vesca]
Length = 2261
Score = 131 bits (330), Expect = 8e-29
Identities = 64/78 (82%), Positives = 71/78 (91%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHGYRK+SLFEVL RN+VPLLRATWF+KVTYLNQIRPG SS S DK+QLSRT
Sbjct: 187 LADHVPHGYRKRSLFEVLTRNNVPLLRATWFVKVTYLNQIRPGSSSISG-IPDKTQLSRT 245
Query: 182 ELWTKDVIDYLQYLLDEY 235
ELWTKDVI+YLQYLLDE+
Sbjct: 246 ELWTKDVIEYLQYLLDEF 263
>ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905096|ref|XP_006445036.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905098|ref|XP_006445037.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876055|ref|XP_006491101.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X1 [Citrus sinensis] gi|568876057|ref|XP_006491102.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 12-like isoform X2 [Citrus sinensis]
gi|557547297|gb|ESR58275.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547298|gb|ESR58276.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547299|gb|ESR58277.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2277
Score = 129 bits (325), Expect = 3e-28
Identities = 61/78 (78%), Positives = 71/78 (91%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHGYRK+SLFEVLIRN+VPLLRATWFIKVTYLNQ+R G +++ S DK QLSRT
Sbjct: 187 LADHVPHGYRKRSLFEVLIRNNVPLLRATWFIKVTYLNQVRHGSANSLSGAQDKIQLSRT 246
Query: 182 ELWTKDVIDYLQYLLDEY 235
E+WTKDVIDYLQ+LLDE+
Sbjct: 247 EIWTKDVIDYLQHLLDEF 264
>ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905092|ref|XP_006445034.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905100|ref|XP_006445038.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876059|ref|XP_006491103.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X3 [Citrus sinensis] gi|557547295|gb|ESR58273.1|
hypothetical protein CICLE_v10018441mg [Citrus
clementina] gi|557547296|gb|ESR58274.1| hypothetical
protein CICLE_v10018441mg [Citrus clementina]
gi|557547300|gb|ESR58278.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2239
Score = 129 bits (325), Expect = 3e-28
Identities = 61/78 (78%), Positives = 71/78 (91%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHGYRK+SLFEVLIRN+VPLLRATWFIKVTYLNQ+R G +++ S DK QLSRT
Sbjct: 149 LADHVPHGYRKRSLFEVLIRNNVPLLRATWFIKVTYLNQVRHGSANSLSGAQDKIQLSRT 208
Query: 182 ELWTKDVIDYLQYLLDEY 235
E+WTKDVIDYLQ+LLDE+
Sbjct: 209 EIWTKDVIDYLQHLLDEF 226
>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
Length = 2272
Score = 129 bits (325), Expect = 3e-28
Identities = 62/78 (79%), Positives = 71/78 (91%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHG+RKK+LFEVLIRN+VPLLRATWFIKVTYLNQ+RP +S SS + DK QLSRT
Sbjct: 187 LADHVPHGFRKKNLFEVLIRNNVPLLRATWFIKVTYLNQVRPASASISSGSPDKIQLSRT 246
Query: 182 ELWTKDVIDYLQYLLDEY 235
ELWTKDVIDYLQ LL+E+
Sbjct: 247 ELWTKDVIDYLQGLLEEF 264
>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
Length = 2037
Score = 129 bits (325), Expect = 3e-28
Identities = 62/78 (79%), Positives = 71/78 (91%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHG+RKK+LFEVLIRN+VPLLRATWFIKVTYLNQ+RP +S SS + DK QLSRT
Sbjct: 187 LADHVPHGFRKKNLFEVLIRNNVPLLRATWFIKVTYLNQVRPASASISSGSPDKIQLSRT 246
Query: 182 ELWTKDVIDYLQYLLDEY 235
ELWTKDVIDYLQ LL+E+
Sbjct: 247 ELWTKDVIDYLQGLLEEF 264
>gb|EOX95959.1| Mediator of RNA polymerase II transcription subunit 12 isoform 3
[Theobroma cacao]
Length = 2257
Score = 127 bits (319), Expect = 2e-27
Identities = 63/78 (80%), Positives = 69/78 (88%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD VPHGYRKK+L EVLIRN+VPLLRATWFIKVTYLNQ+ PG S+ SS DK+QLSRT
Sbjct: 187 LADQVPHGYRKKTLIEVLIRNNVPLLRATWFIKVTYLNQVHPG-SAISSGAPDKAQLSRT 245
Query: 182 ELWTKDVIDYLQYLLDEY 235
ELWTKDVIDYLQ LLDE+
Sbjct: 246 ELWTKDVIDYLQTLLDEF 263
>gb|EOX95958.1| Mediator of RNA polymerase II transcription subunit 12 isoform 2
[Theobroma cacao]
Length = 2237
Score = 127 bits (319), Expect = 2e-27
Identities = 63/78 (80%), Positives = 69/78 (88%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD VPHGYRKK+L EVLIRN+VPLLRATWFIKVTYLNQ+ PG S+ SS DK+QLSRT
Sbjct: 187 LADQVPHGYRKKTLIEVLIRNNVPLLRATWFIKVTYLNQVHPG-SAISSGAPDKAQLSRT 245
Query: 182 ELWTKDVIDYLQYLLDEY 235
ELWTKDVIDYLQ LLDE+
Sbjct: 246 ELWTKDVIDYLQTLLDEF 263
>gb|EOX95957.1| Mediator of RNA polymerase II transcription subunit 12 isoform 1
[Theobroma cacao]
Length = 2261
Score = 127 bits (319), Expect = 2e-27
Identities = 63/78 (80%), Positives = 69/78 (88%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD VPHGYRKK+L EVLIRN+VPLLRATWFIKVTYLNQ+ PG S+ SS DK+QLSRT
Sbjct: 187 LADQVPHGYRKKTLIEVLIRNNVPLLRATWFIKVTYLNQVHPG-SAISSGAPDKAQLSRT 245
Query: 182 ELWTKDVIDYLQYLLDEY 235
ELWTKDVIDYLQ LLDE+
Sbjct: 246 ELWTKDVIDYLQTLLDEF 263
>sp|H3K2Y6.1|MED12_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
12; AltName: Full=Protein CENTER CITY; AltName:
Full=Protein CRYPTIC PRECOCIOUS
gi|374428817|dbj|BAL49816.1| cryptic precocious
[Arabidopsis thaliana] gi|374428819|dbj|BAL49817.1|
cryptic precocious splicing variant [Arabidopsis
thaliana] gi|374428821|dbj|BAL49818.1| cryptic
precocious [Arabidopsis thaliana]
Length = 2235
Score = 125 bits (315), Expect = 4e-27
Identities = 61/79 (77%), Positives = 70/79 (88%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LADN+P GYR+K+LFEVLIRN+VPLLRATWFIKVTYLNQ+RP P++ SS T DK+Q SR
Sbjct: 185 LADNIP-GYRRKTLFEVLIRNNVPLLRATWFIKVTYLNQVRPSPAAISSGTPDKTQASRC 243
Query: 182 ELWTKDVIDYLQYLLDEYL 238
E WTKDVI+YLQYLLDE L
Sbjct: 244 EQWTKDVIEYLQYLLDELL 262
>ref|XP_004510784.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Cicer arietinum]
Length = 2223
Score = 125 bits (313), Expect = 8e-27
Identities = 59/78 (75%), Positives = 67/78 (85%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHGY++ SL VLIRN+VPLLRATWF+KVTYLNQ RPG + SS TADK QLSRT
Sbjct: 186 LADHVPHGYKRSSLLAVLIRNNVPLLRATWFVKVTYLNQFRPGSAGVSSVTADKIQLSRT 245
Query: 182 ELWTKDVIDYLQYLLDEY 235
E+WTKDVI YLQ LLDE+
Sbjct: 246 EIWTKDVIHYLQSLLDEF 263
>ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Cucumis sativus]
Length = 2254
Score = 124 bits (311), Expect = 1e-26
Identities = 56/78 (71%), Positives = 68/78 (87%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LADNVPHGYRK++LFEVLIRN+VPLLRATWFIK+ YLNQ+RP +S S DK+QLSRT
Sbjct: 187 LADNVPHGYRKRALFEVLIRNNVPLLRATWFIKINYLNQVRPNSASISCGAFDKAQLSRT 246
Query: 182 ELWTKDVIDYLQYLLDEY 235
E WTKDV+DYL+ L++E+
Sbjct: 247 EFWTKDVVDYLECLVEEF 264
>ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Cucumis sativus]
Length = 2254
Score = 124 bits (311), Expect = 1e-26
Identities = 56/78 (71%), Positives = 68/78 (87%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LADNVPHGYRK++LFEVLIRN+VPLLRATWFIK+ YLNQ+RP +S S DK+QLSRT
Sbjct: 187 LADNVPHGYRKRALFEVLIRNNVPLLRATWFIKINYLNQVRPNSASISCGAFDKAQLSRT 246
Query: 182 ELWTKDVIDYLQYLLDEY 235
E WTKDV+DYL+ L++E+
Sbjct: 247 EFWTKDVVDYLECLVEEF 264
>gb|ESW07065.1| hypothetical protein PHAVU_010G099000g [Phaseolus vulgaris]
Length = 2215
Score = 123 bits (309), Expect = 2e-26
Identities = 58/79 (73%), Positives = 70/79 (88%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHGY++ SL +VLIRN+VPLLRATWFIKVTYLNQ++PG SS TADK QLSR+
Sbjct: 187 LADHVPHGYKRASLLDVLIRNNVPLLRATWFIKVTYLNQVQPGSVGISSGTADKIQLSRS 246
Query: 182 ELWTKDVIDYLQYLLDEYL 238
++WTKDVI+YLQ LLDE+L
Sbjct: 247 DVWTKDVINYLQALLDEFL 265
>ref|XP_006583297.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Glycine max]
gi|571465238|ref|XP_006583298.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Glycine max]
Length = 2222
Score = 123 bits (308), Expect = 3e-26
Identities = 58/79 (73%), Positives = 69/79 (87%)
Frame = +2
Query: 2 LADNVPHGYRKKSLFEVLIRNSVPLLRATWFIKVTYLNQIRPGPSSTSSETADKSQLSRT 181
LAD+VPHGY++ SL EVLIRN+VPLLRATWFIKVTYLNQ+RPG SS ADK QLSR+
Sbjct: 187 LADHVPHGYKRTSLLEVLIRNNVPLLRATWFIKVTYLNQVRPGSVGISSGAADKIQLSRS 246
Query: 182 ELWTKDVIDYLQYLLDEYL 238
++WTKDVI+YLQ L+DE+L
Sbjct: 247 DVWTKDVINYLQTLVDEFL 265