BLASTX nr result
ID: Rheum21_contig00036532
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00036532
(229 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 90 4e-16
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 80 3e-13
emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera] 77 2e-12
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 76 5e-12
emb|CAN76474.1| hypothetical protein VITISV_016008 [Vitis vinifera] 76 5e-12
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 75 9e-12
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 75 9e-12
emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera] 75 1e-11
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 74 2e-11
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 74 2e-11
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group] 74 2e-11
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 74 3e-11
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 74 3e-11
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 74 3e-11
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 73 3e-11
emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera] 73 3e-11
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group] 73 3e-11
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc... 73 5e-11
gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-... 73 5e-11
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 73 5e-11
>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
Length = 821
Score = 89.7 bits (221), Expect = 4e-16
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ATK +PFE+VYG NPLTPLD+ P P+ + ++ +AE +++LH RT++H
Sbjct: 323 FAYNRTVHSATKFSPFEIVYGFNPLTPLDLLPLPIDERASMDGKKKAEFVKQLHERTRQH 382
Query: 48 LERRAAQYTAQNLKGQ 1
+E+R QY Q KG+
Sbjct: 383 IEKRTEQYATQANKGR 398
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/71 (47%), Positives = 49/71 (69%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ T+L+PFEVVYG NP+TPLD+ P PL + + A RA+ ++++H +TKE
Sbjct: 999 FAYNRVVHSTTQLSPFEVVYGFNPITPLDLLPLPLQERANMEATKRADYVKKMHEKTKET 1058
Query: 48 LERRAAQYTAQ 16
+ER Y A+
Sbjct: 1059 IERIIQSYAAK 1069
>emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]
Length = 893
Score = 77.0 bits (188), Expect = 2e-12
Identities = 30/76 (39%), Positives = 50/76 (65%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ T +PF++VYG NPLTPLD+ P P+ + ++ +AE +++LH ++H
Sbjct: 139 FAYNRSVHSTTNFSPFKIVYGFNPLTPLDLLPLPVNEMTSLDGEKKAEMVKKLHESVRKH 198
Query: 48 LERRAAQYTAQNLKGQ 1
+E++ QY + KG+
Sbjct: 199 IEKKNEQYATKANKGR 214
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 75.9 bits (185), Expect = 5e-12
Identities = 29/68 (42%), Positives = 47/68 (69%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YN H+A+K +PF++VYG NP TPLD+ P PL + V ++ +AE +Q++H + K++
Sbjct: 1588 FAYNHSMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAELVQQIHEQAKKN 1647
Query: 48 LERRAAQY 25
+E + QY
Sbjct: 1648 IEEKTKQY 1655
>emb|CAN76474.1| hypothetical protein VITISV_016008 [Vitis vinifera]
Length = 519
Score = 75.9 bits (185), Expect = 5e-12
Identities = 30/75 (40%), Positives = 48/75 (64%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ T +PF++VYG NPLTPLD+ P P+ + ++ +AE + +LH ++H
Sbjct: 294 FAYNRSVHSTTNFSPFKIVYGFNPLTPLDLLPLPVNEMTSLDGEKKAEMVXKLHESVRKH 353
Query: 48 LERRAAQYTAQNLKG 4
+E++ QY + KG
Sbjct: 354 IEKKNEQYATKANKG 368
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/70 (44%), Positives = 47/70 (67%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ T + PFEVVYG PL+P+D+ P PL + + A+ RA ++++H +TKE
Sbjct: 1400 FAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEA 1459
Query: 48 LERRAAQYTA 19
+E+R+ Y A
Sbjct: 1460 IEKRSKYYAA 1469
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/70 (44%), Positives = 47/70 (67%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ T + PFEVVYG PL+P+D+ P PL + + A+ RA ++++H +TKE
Sbjct: 368 FAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEA 427
Query: 48 LERRAAQYTA 19
+E+R+ Y A
Sbjct: 428 IEKRSKYYAA 437
>emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]
Length = 771
Score = 74.7 bits (182), Expect = 1e-11
Identities = 30/76 (39%), Positives = 49/76 (64%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ T +PFE+VYG NPLTPLD+ P + + ++ +AE +++LH ++H
Sbjct: 575 FAYNRSIHSTTNFSPFEIVYGFNPLTPLDLLPLLVNEMTSLDGEKKAEMVKKLHESVRKH 634
Query: 48 LERRAAQYTAQNLKGQ 1
+E++ QY + KG+
Sbjct: 635 IEKKNEQYATKANKGR 650
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ T ++PFEV YG NPLTPLD+ P + D ++AA +A+ I+E H + +
Sbjct: 1120 FAYNRAIHSTTNMSPFEVAYGFNPLTPLDLIPLHVNDKECVDAAKKAQGIREFHSKVRAQ 1179
Query: 48 LERRAAQYTAQNLKGQ 1
+E++ QY + KG+
Sbjct: 1180 IEKKNEQYAQKANKGR 1195
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR +H+ TK PFE+VYGL P P+D+ P P + V +A RAE + +LH TKE+
Sbjct: 1425 FAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPHPTSERVNFDAKYRAELMLKLHETTKEN 1484
Query: 48 LERRAAQYTAQNLKGQ 1
+ER +Y KG+
Sbjct: 1485 IERMNIKYKLAGSKGK 1500
>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
Length = 1239
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR +H+ TK PFE+VYGL P P+D+ P P + V +A +RAE + +LH TKE+
Sbjct: 1018 FSYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKHRAELMLKLHETTKEN 1077
Query: 48 LERRAAQYTAQNLKGQ 1
+ER +Y KG+
Sbjct: 1078 IERMNIKYKLAGSKGK 1093
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/76 (43%), Positives = 49/76 (64%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ TK+ PF++VYGL P P+D+ P P + + +A RAE + +LH TKE+
Sbjct: 1400 FAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKEN 1459
Query: 48 LERRAAQYTAQNLKGQ 1
+ER A+Y + KG+
Sbjct: 1460 IERMNARYKFASDKGR 1475
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ TK+ PFE+VYG P P+D+ P P + V +A RAE I ++H TKE+
Sbjct: 1456 FAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKEN 1515
Query: 48 LERRAAQYTAQNLKGQ 1
+ER A+Y KG+
Sbjct: 1516 IERMNARYKLAGDKGR 1531
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ TK+ PFE+VYG P P+D+ P P + V +A RAE I ++H TKE+
Sbjct: 1453 FAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKEN 1512
Query: 48 LERRAAQYTAQNLKGQ 1
+ER A+Y KG+
Sbjct: 1513 IERMNARYKLAGDKGR 1528
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR +H+ TK PFE+VYGL P P+D+ P P + V +A RAE + +LH TKE+
Sbjct: 1425 FAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYRAELMLKLHETTKEN 1484
Query: 48 LERRAAQYTAQNLKGQ 1
+ER +Y KG+
Sbjct: 1485 IERMNIKYKLAGSKGK 1500
>emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera]
Length = 1124
Score = 73.2 bits (178), Expect = 3e-11
Identities = 27/71 (38%), Positives = 47/71 (66%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YN+ H+ T +PFE+V+G NPLTPLD+ P P+ + + ++ + E +++LH ++H
Sbjct: 937 FAYNQSVHSTTNFSPFEIVHGFNPLTPLDLLPLPINEMISLDGEKKVEMVKKLHESVQKH 996
Query: 48 LERRAAQYTAQ 16
+ER+ QY +
Sbjct: 997 IERKNEQYATK 1007
>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
Length = 1170
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR +H+ TK PFE+VYGL P P+D+ P P + V +A RAE + +LH TKE+
Sbjct: 913 FAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYRAELMLKLHETTKEN 972
Query: 48 LERRAAQYTAQNLKGQ 1
+ER +Y KG+
Sbjct: 973 IERMNIKYKLAGSKGK 988
>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 817
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ TK+ PF++VYGL P P+D+ P P + + +A RAE + +LH TKE+
Sbjct: 585 FAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKEN 644
Query: 48 LERRAAQYTAQNLKGQ 1
+ER A+Y KG+
Sbjct: 645 IERMNAKYKFAGDKGR 660
>gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550404|gb|ABA93201.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1297
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ TK+ PF++VYGL P P+D+ P P + + +A RAE + +LH TKE+
Sbjct: 1065 FAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKEN 1124
Query: 48 LERRAAQYTAQNLKGQ 1
+ER A+Y KG+
Sbjct: 1125 IERMNAKYKFAGDKGR 1140
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = -2
Query: 228 FCYNRCRHTATKLTPFEVVYGLNPLTPLDMTPRPLPDPVQINAANRAEQIQELHRRTKEH 49
F YNR H+ TK+ PF++VYGL P P+D+ P P + + +A RAE + +LH TKE+
Sbjct: 1507 FAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKEN 1566
Query: 48 LERRAAQYTAQNLKGQ 1
+ER A+Y KG+
Sbjct: 1567 IERMNAKYKFAGDKGR 1582