BLASTX nr result
ID: Rheum21_contig00036371
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00036371
(259 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1... 77 2e-12
ref|XP_003605542.1| Helicase-like protein [Medicago truncatula] ... 74 2e-11
ref|XP_003605523.1| Helicase-like protein [Medicago truncatula] ... 74 2e-11
ref|XP_003605521.1| Helicase-like protein [Medicago truncatula] ... 74 2e-11
ref|XP_003626025.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 73 3e-11
ref|XP_003624099.1| Helicase-like protein [Medicago truncatula] ... 73 3e-11
ref|XP_004517090.1| PREDICTED: ATP-dependent helicase RRM3-like,... 72 1e-10
ref|XP_003638005.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 69 5e-10
ref|XP_004509812.1| PREDICTED: ATP-dependent helicase RRM3-like ... 66 4e-09
ref|XP_003598094.1| Helicase-like protein [Medicago truncatula] ... 66 4e-09
ref|XP_003637948.1| Helicase-like protein [Medicago truncatula] ... 65 9e-09
ref|XP_003603826.1| Helicase-like protein [Medicago truncatula] ... 65 1e-08
ref|XP_003607945.1| Helicase-like protein [Medicago truncatula] ... 64 2e-08
ref|XP_003606875.1| Helicase-like protein [Medicago truncatula] ... 64 2e-08
ref|XP_003604594.1| Helicase-like protein [Medicago truncatula] ... 64 2e-08
ref|XP_003605676.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 62 8e-08
ref|XP_003600273.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 62 8e-08
ref|XP_006601497.1| PREDICTED: uncharacterized protein LOC100798... 62 1e-07
ref|XP_003622843.1| Helicase-like protein [Medicago truncatula] ... 60 2e-07
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 60 3e-07
>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein [Beta
vulgaris subsp. vulgaris]
Length = 2037
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/85 (44%), Positives = 54/85 (63%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXX 80
L+S++LSRP+ VW++TW L++DI+ RQR ++Q DLQLSD QL+NYAL
Sbjct: 1496 LISDSLSRPDFVWEKTWHLLSEDIIHRQRNIMQNNDLQLSDDQLRNYALVEIEKILRSNG 1555
Query: 79 XXXRRYPSMPLPNDILLSEGRNKLI 5
R+Y MP P+ + G N+LI
Sbjct: 1556 CSLRKYDDMPFPDYGTICNGYNRLI 1580
>ref|XP_003605542.1| Helicase-like protein [Medicago truncatula]
gi|355506597|gb|AES87739.1| Helicase-like protein
[Medicago truncatula]
Length = 1641
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXX 80
L+SN S+PE VW +TWQ L+DD+L RQRR +++PDL L D QL++Y LA
Sbjct: 997 LVSNQFSQPEVVWNKTWQNLSDDMLHRQRRAMRVPDLVLDDDQLKSYTLAEIERLLHSHG 1056
Query: 79 XXXRR-YPSMPLPNDILLSEGRNKLI 5
+ YP+MP + L+ E RN+LI
Sbjct: 1057 KSLKEDYPTMPRTDISLIHESRNRLI 1082
>ref|XP_003605523.1| Helicase-like protein [Medicago truncatula]
gi|355506578|gb|AES87720.1| Helicase-like protein
[Medicago truncatula]
Length = 1585
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXX 80
L+SN S+PE VW +TWQ L+DD+L RQRR +++PDL L D QL++Y LA
Sbjct: 997 LVSNQFSQPEVVWNKTWQNLSDDMLHRQRRAMRVPDLVLDDDQLKSYTLAEIERLLHSHG 1056
Query: 79 XXXRR-YPSMPLPNDILLSEGRNKLI 5
+ YP+MP + L+ E RN+LI
Sbjct: 1057 KSLKEDYPTMPRTDISLIHESRNRLI 1082
>ref|XP_003605521.1| Helicase-like protein [Medicago truncatula]
gi|355506576|gb|AES87718.1| Helicase-like protein
[Medicago truncatula]
Length = 1262
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXX 80
L+SN S+PE VW +TWQ L+DD+L RQRR +++PDL L D QL++Y LA
Sbjct: 997 LVSNQFSQPEVVWNKTWQNLSDDMLHRQRRAMRVPDLVLDDDQLKSYTLAEIERLLHSHG 1056
Query: 79 XXXRR-YPSMPLPNDILLSEGRNKLI 5
+ YP+MP + L+ E RN+LI
Sbjct: 1057 KSLKEDYPTMPRTDISLIHESRNRLI 1082
>ref|XP_003626025.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355501040|gb|AES82243.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 1589
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALA-XXXXXXXXX 83
L+SN SRPE VW++TW L+DD+L RQR L++PDL L D QL++Y LA
Sbjct: 1001 LVSNQFSRPEVVWEKTWLHLSDDMLHRQRLALRVPDLVLDDDQLKSYTLAEIERLLQSHG 1060
Query: 82 XXXXRRYPSMPLPNDILLSEGRNKLI 5
YP+MP+ + L+ E RN+LI
Sbjct: 1061 KKMKDDYPTMPVTDVSLIHESRNRLI 1086
>ref|XP_003624099.1| Helicase-like protein [Medicago truncatula]
gi|355499114|gb|AES80317.1| Helicase-like protein
[Medicago truncatula]
Length = 1122
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALA-XXXXXXXXX 83
L+SN SRPE VW++TW L+DD+L RQR L++PDL L D QL++Y LA
Sbjct: 534 LVSNQFSRPEVVWEKTWLHLSDDMLHRQRLALRVPDLVLDDDQLKSYTLAEIERLLQSHG 593
Query: 82 XXXXRRYPSMPLPNDILLSEGRNKLI 5
YP+MP+ + L+ E RN+LI
Sbjct: 594 KKMKDDYPTMPVTDVSLIHESRNRLI 619
>ref|XP_004517090.1| PREDICTED: ATP-dependent helicase RRM3-like, partial [Cicer
arietinum]
Length = 391
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/85 (42%), Positives = 49/85 (57%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXX 80
LL+ T+ P +W+ W+ L++DIL RQRRLL PDL LSD QL+NYAL+
Sbjct: 39 LLNCTVINPGLLWESNWKLLSEDILYRQRRLLNFPDLHLSDDQLKNYALSEIQKHLRKVG 98
Query: 79 XXXRRYPSMPLPNDILLSEGRNKLI 5
Y M +PN ++ E N+LI
Sbjct: 99 KSLEDYKGMAIPNSNVIEELNNRLI 123
>ref|XP_003638005.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355503940|gb|AES85143.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 841
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALA-XXXXXXXXX 83
L++N SRPE VW++TW+ L+DD+L QRRL ++ DL L D QLQ+YALA
Sbjct: 278 LVTNQFSRPEVVWEKTWRNLSDDVLSTQRRLHRVQDLVLDDHQLQSYALAEVEKLLRGHG 337
Query: 82 XXXXRRYPSMPLPNDILLSEGRNKLI 5
YP MP P+ +++ RN L+
Sbjct: 338 QSMKDDYPMMPQPDASMINRVRNMLM 363
>ref|XP_004509812.1| PREDICTED: ATP-dependent helicase RRM3-like [Cicer arietinum]
Length = 927
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/85 (41%), Positives = 48/85 (56%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXX 80
LL+ T+ P +W+ + L++DIL RQRRLL PDL LSD QL+NYAL+
Sbjct: 304 LLNCTVINPGLLWESNSKLLSEDILYRQRRLLNFPDLHLSDDQLKNYALSEIQKHLRKVG 363
Query: 79 XXXRRYPSMPLPNDILLSEGRNKLI 5
Y M +PN ++ E N+LI
Sbjct: 364 KSLEDYKGMAIPNSNVIEELNNRLI 388
>ref|XP_003598094.1| Helicase-like protein [Medicago truncatula]
gi|355487142|gb|AES68345.1| Helicase-like protein
[Medicago truncatula]
Length = 1672
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALA-XXXXXXXXX 83
L+SN SRP+HVW +TW+ L+DD+L RQ+R+L++ D D QL++Y LA
Sbjct: 1088 LVSNQFSRPDHVWDKTWRQLSDDVLQRQKRILRVQD----DNQLRSYVLAEIERLVQMHG 1143
Query: 82 XXXXRRYPSMPLPNDILLSEGRNKLI 5
YP MP P+ L+ RN L+
Sbjct: 1144 KKMKDDYPMMPRPDVSLIHHARNMLL 1169
>ref|XP_003637948.1| Helicase-like protein [Medicago truncatula]
gi|355503883|gb|AES85086.1| Helicase-like protein
[Medicago truncatula]
Length = 805
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALA-XXXXXXXXX 83
L++N SRPE VW++TW+ L+DD+L QRRL ++ DL L D QLQ+YALA
Sbjct: 278 LVTNQFSRPEVVWEKTWRNLSDDVLSTQRRLHRVQDLVLDDHQLQSYALAEVEKLLRGHG 337
Query: 82 XXXXRRYPSMPLPND 38
YP MP P++
Sbjct: 338 QSMKDDYPMMPQPDE 352
>ref|XP_003603826.1| Helicase-like protein [Medicago truncatula]
gi|355492874|gb|AES74077.1| Helicase-like protein
[Medicago truncatula]
Length = 1679
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQI-----PDLQLSDKQLQNYALAXXXXX 95
L++N ++PE VW +TWQ L+DD+L RQRR Q+ DL L D QL+NY LA
Sbjct: 1101 LVTNQFAQPEVVWSKTWQNLSDDMLHRQRRASQVIFENHADLVLDDDQLKNYTLAEIDRL 1160
Query: 94 XXXXXXXXRR-YPSMPLPNDILLSEGRNKLI 5
+ YP+MP + L+ E RN+LI
Sbjct: 1161 LRSHGKSMKEDYPTMPRTDISLIHESRNRLI 1191
>ref|XP_003607945.1| Helicase-like protein [Medicago truncatula]
gi|355509000|gb|AES90142.1| Helicase-like protein
[Medicago truncatula]
Length = 1651
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/85 (35%), Positives = 46/85 (54%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXX 80
LL+ T+ RP HVW TW++L+D +L QRR+ DL+L+D Q++N L
Sbjct: 1064 LLTATMDRPVHVWNNTWKWLSDGVLYEQRRVANNRDLELTDDQIKNLTLTLIEKHMEKNR 1123
Query: 79 XXXRRYPSMPLPNDILLSEGRNKLI 5
+ + P P D ++ E N+LI
Sbjct: 1124 RSLKEFKGFPYPTDYVMEELGNRLI 1148
>ref|XP_003606875.1| Helicase-like protein [Medicago truncatula]
gi|355507930|gb|AES89072.1| Helicase-like protein
[Medicago truncatula]
Length = 1674
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/85 (35%), Positives = 46/85 (54%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXX 80
LL+ T+ RP HVW TW++L+D +L QRR+ DL+L+D Q++N L
Sbjct: 1087 LLTATMDRPVHVWNNTWKWLSDGVLYEQRRVANNRDLELTDDQIKNLTLTLIEKHMEKNR 1146
Query: 79 XXXRRYPSMPLPNDILLSEGRNKLI 5
+ + P P D ++ E N+LI
Sbjct: 1147 RSLKEFKGFPYPTDYVMEELGNRLI 1171
>ref|XP_003604594.1| Helicase-like protein [Medicago truncatula]
gi|355505649|gb|AES86791.1| Helicase-like protein
[Medicago truncatula]
Length = 1689
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/85 (34%), Positives = 49/85 (57%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXX 80
L+++++ RP+HVW++TWQ+L+D IL QRRL P L L+++Q++N L
Sbjct: 1107 LIASSMHRPKHVWEKTWQWLSDGILYEQRRLANNPGLMLTEEQIKNLTLTEIERHMERNR 1166
Query: 79 XXXRRYPSMPLPNDILLSEGRNKLI 5
+ Y P P ++ + N+LI
Sbjct: 1167 RSLKDYKGFPYPEGYIVEQLGNRLI 1191
>ref|XP_003605676.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355506731|gb|AES87873.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 1561
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/82 (39%), Positives = 43/82 (52%)
Frame = -1
Query: 250 NTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXXXXX 71
NT++ P VW TW+ L+D IL +R+ L IPDLQ+ D +LQN L
Sbjct: 977 NTMNNPLEVWNSTWKLLSDGILYNRRKTLNIPDLQICDDELQNLCLIEVDNLLMANGRSL 1036
Query: 70 RRYPSMPLPNDILLSEGRNKLI 5
Y +MP P + E +NKLI
Sbjct: 1037 EDYKTMPTPEFDDVIEFQNKLI 1058
>ref|XP_003600273.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355489321|gb|AES70524.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 1634
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/82 (39%), Positives = 43/82 (52%)
Frame = -1
Query: 250 NTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXXXXX 71
NT++ P VW TW+ L+D IL +R+ L IPDLQ+ D +LQN L
Sbjct: 1050 NTMNNPLEVWNSTWKLLSDGILYNRRKTLNIPDLQICDDELQNLCLIEVDNLLMANGRSL 1109
Query: 70 RRYPSMPLPNDILLSEGRNKLI 5
Y +MP P + E +NKLI
Sbjct: 1110 EDYKTMPTPEFDDVIEFQNKLI 1131
>ref|XP_006601497.1| PREDICTED: uncharacterized protein LOC100798985 [Glycine max]
Length = 439
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXX 80
LL+ T+S+P+ VW +TW ++ADDI+ ++ P LQL D+ LQN L
Sbjct: 349 LLTATMSKPKQVWDQTWHWMADDIVYNYKKSSTSPALQLDDRTLQNLVLLEIEQLLQANQ 408
Query: 79 XXXRRYPSMPLPND 38
R YPSMP P D
Sbjct: 409 RSLRDYPSMPYPED 422
>ref|XP_003622843.1| Helicase-like protein [Medicago truncatula]
gi|355497858|gb|AES79061.1| Helicase-like protein
[Medicago truncatula]
Length = 1757
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/85 (36%), Positives = 46/85 (54%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYALAXXXXXXXXXX 80
LLSN + RP +VW+ TW +LAD IL QRR+ P+LQL++++L N L
Sbjct: 1171 LLSNIMDRPLYVWENTWHWLADGILYAQRRIANNPNLQLTEEELMNLTLLEIEKILELNR 1230
Query: 79 XXXRRYPSMPLPNDILLSEGRNKLI 5
+ MP D + ++ N+LI
Sbjct: 1231 KSLADFKPMPYLMDYITAQLGNRLI 1255
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = -1
Query: 259 LLSNTLSRPEHVWQETWQFLADDILVRQRRLLQIPDLQLSDKQLQNYAL 113
LLS++L+RPEHVW ETW L++DIL+++R + +L L++ Q+QNY L
Sbjct: 843 LLSDSLARPEHVWSETWHLLSEDILIKKRDEFKNQELTLTEAQIQNYTL 891