BLASTX nr result

ID: Rheum21_contig00036351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00036351
         (329 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338024.1| PREDICTED: rhamnogalacturonate lyase B-like ...   120   1e-25
ref|XP_004238021.1| PREDICTED: rhamnogalacturonate lyase B-like ...   120   1e-25
ref|XP_006338025.1| PREDICTED: rhamnogalacturonate lyase B-like ...   120   2e-25
gb|EOY15516.1| Rhamnogalacturonate lyase family protein [Theobro...   120   2e-25
gb|EMJ25851.1| hypothetical protein PRUPE_ppa026307mg [Prunus pe...   119   5e-25
ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas...   117   2e-24
emb|CBI19298.3| unnamed protein product [Vitis vinifera]              117   2e-24
ref|XP_004252722.1| PREDICTED: probable rhamnogalacturonate lyas...   114   1e-23
ref|XP_006472413.1| PREDICTED: rhamnogalacturonate lyase B-like ...   114   1e-23
ref|XP_006472412.1| PREDICTED: rhamnogalacturonate lyase B-like ...   114   1e-23
ref|XP_006472411.1| PREDICTED: rhamnogalacturonate lyase B-like ...   114   1e-23
ref|XP_004288875.1| PREDICTED: rhamnogalacturonate lyase-like [F...   114   1e-23
ref|XP_004501130.1| PREDICTED: rhamnogalacturonate lyase B-like ...   114   2e-23
ref|XP_004238544.1| PREDICTED: probable rhamnogalacturonate lyas...   113   2e-23
ref|XP_003628875.1| Rhamnogalacturonate lyase [Medicago truncatu...   113   3e-23
ref|XP_006433775.1| hypothetical protein CICLE_v10000543mg [Citr...   112   4e-23
gb|AFD62270.1| rhamnogalacturonate lyase family protein, partial...   112   4e-23
ref|XP_006306951.1| hypothetical protein CARUB_v10008518mg [Caps...   112   5e-23
gb|EXC01184.1| hypothetical protein L484_025562 [Morus notabilis]     112   7e-23
ref|XP_006366427.1| PREDICTED: probable rhamnogalacturonate lyas...   112   7e-23

>ref|XP_006338024.1| PREDICTED: rhamnogalacturonate lyase B-like [Solanum tuberosum]
          Length = 670

 Score =  120 bits (302), Expect = 1e-25
 Identities = 53/89 (59%), Positives = 72/89 (80%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ A+V+VRVN P+T+ P+F     G D++I RHGIHGLYWL+++D+QGN+L  
Sbjct: 580 RIAIASATLAEVQVRVNNPSTNRPVFSTGLIGRDNSIARHGIHGLYWLYNIDIQGNLLVQ 639

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAP 61
           G+N IYL Q ++ SPFQGI+YDYIRLEAP
Sbjct: 640 GDNTIYLGQPRNQSPFQGIMYDYIRLEAP 668


>ref|XP_004238021.1| PREDICTED: rhamnogalacturonate lyase B-like [Solanum lycopersicum]
          Length = 637

 Score =  120 bits (302), Expect = 1e-25
 Identities = 53/89 (59%), Positives = 72/89 (80%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ A+V+VRVN P+T+ P+F     G D++I RHGIHGLYWL+++D+QGN+L  
Sbjct: 547 RIAIASATLAEVQVRVNNPSTNRPVFSTGLIGRDNSIARHGIHGLYWLYNIDIQGNLLVQ 606

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAP 61
           G+N IYL Q ++ SPFQGI+YDYIRLEAP
Sbjct: 607 GDNTIYLGQPRNQSPFQGIMYDYIRLEAP 635


>ref|XP_006338025.1| PREDICTED: rhamnogalacturonate lyase B-like [Solanum tuberosum]
          Length = 632

 Score =  120 bits (300), Expect = 2e-25
 Identities = 53/89 (59%), Positives = 71/89 (79%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ A+V+VRVN P+T+ P+F     G D++I RHGIHGLYWL+++D+QGN+L  
Sbjct: 542 RIAIASATLAEVQVRVNNPSTNRPLFTTGLFGRDNSIARHGIHGLYWLYNIDIQGNLLVQ 601

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAP 61
           G+N IYL Q +  SPFQGI+YDYIRLEAP
Sbjct: 602 GDNTIYLGQPRHQSPFQGIMYDYIRLEAP 630


>gb|EOY15516.1| Rhamnogalacturonate lyase family protein [Theobroma cacao]
          Length = 645

 Score =  120 bits (300), Expect = 2e-25
 Identities = 53/92 (57%), Positives = 72/92 (78%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           RLA+A +  ++++VRVN+P+   P+F     G D+ I RHGIHGLYWL++VD+ GN+L  
Sbjct: 548 RLALASAHASELQVRVNDPDAISPLFSSGQIGKDNTIARHGIHGLYWLYNVDIPGNLLHE 607

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSSS 52
           G+N I+LTQ+KS+SPFQGI+YDYIRLE P SS
Sbjct: 608 GDNTIFLTQSKSTSPFQGIMYDYIRLEGPPSS 639


>gb|EMJ25851.1| hypothetical protein PRUPE_ppa026307mg [Prunus persica]
          Length = 642

 Score =  119 bits (297), Expect = 5e-25
 Identities = 54/95 (56%), Positives = 73/95 (76%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           RLAIA ++ ++++VRVN+P   PP+F     G D++I RHGIHGLYWLF+VD+  + +  
Sbjct: 545 RLAIASATLSELQVRVNDPKAYPPLFSSGMIGKDNSIARHGIHGLYWLFNVDIPSSRIIE 604

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSSSAPK 43
           G+NIIYLTQ +S+SPFQGI+YDYIRLE P S + K
Sbjct: 605 GDNIIYLTQPRSTSPFQGIMYDYIRLEGPPSLSSK 639


>ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1
           [Vitis vinifera]
          Length = 643

 Score =  117 bits (293), Expect = 2e-24
 Identities = 54/91 (59%), Positives = 70/91 (76%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ ++++VRVN+P  +PP F     G D+ I RHGIHGLYWL+ V+V GN+L  
Sbjct: 543 RVAIASATLSELQVRVNDPKANPPHFTSGLIGRDNTIARHGIHGLYWLYSVNVLGNLLVE 602

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSS 55
           GEN I+LTQ +S+SPFQGILYDYIRLE P S
Sbjct: 603 GENTIFLTQPRSTSPFQGILYDYIRLEGPPS 633


>emb|CBI19298.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  117 bits (293), Expect = 2e-24
 Identities = 54/91 (59%), Positives = 70/91 (76%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ ++++VRVN+P  +PP F     G D+ I RHGIHGLYWL+ V+V GN+L  
Sbjct: 556 RVAIASATLSELQVRVNDPKANPPHFTSGLIGRDNTIARHGIHGLYWLYSVNVLGNLLVE 615

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSS 55
           GEN I+LTQ +S+SPFQGILYDYIRLE P S
Sbjct: 616 GENTIFLTQPRSTSPFQGILYDYIRLEGPPS 646


>ref|XP_004252722.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Solanum
           lycopersicum]
          Length = 640

 Score =  114 bits (286), Expect = 1e-23
 Identities = 49/90 (54%), Positives = 70/90 (77%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+A+A S++A+++VR+N+P T PP+      G D+AI RH IHG+YWLF V ++G++L  
Sbjct: 545 RVALAASNHAELQVRINDPTTDPPLLSTGEIGGDNAIARHAIHGIYWLFTVTIRGSLLLG 604

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPS 58
           GEN I+LTQ K+++ FQGI+YDYIRLE PS
Sbjct: 605 GENTIFLTQAKTANAFQGIMYDYIRLEGPS 634


>ref|XP_006472413.1| PREDICTED: rhamnogalacturonate lyase B-like isoform X3 [Citrus
           sinensis]
          Length = 638

 Score =  114 bits (285), Expect = 1e-23
 Identities = 51/92 (55%), Positives = 72/92 (78%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ ++++VR+N+P+T+ P+F     G D++I RHGIHGLYWLF+VDV G  L +
Sbjct: 534 RVAIASANLSELQVRINDPSTNRPLFSSGLIGRDNSIARHGIHGLYWLFNVDVPGARLVS 593

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSSS 52
           G+N I+LTQ +S+SPFQGI+YDYIR E P  S
Sbjct: 594 GDNTIFLTQPRSTSPFQGIMYDYIRFEGPPDS 625


>ref|XP_006472412.1| PREDICTED: rhamnogalacturonate lyase B-like isoform X2 [Citrus
           sinensis]
          Length = 647

 Score =  114 bits (285), Expect = 1e-23
 Identities = 51/92 (55%), Positives = 72/92 (78%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ ++++VR+N+P+T+ P+F     G D++I RHGIHGLYWLF+VDV G  L +
Sbjct: 543 RVAIASANLSELQVRINDPSTNRPLFSSGLIGRDNSIARHGIHGLYWLFNVDVPGARLVS 602

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSSS 52
           G+N I+LTQ +S+SPFQGI+YDYIR E P  S
Sbjct: 603 GDNTIFLTQPRSTSPFQGIMYDYIRFEGPPDS 634


>ref|XP_006472411.1| PREDICTED: rhamnogalacturonate lyase B-like isoform X1 [Citrus
           sinensis]
          Length = 650

 Score =  114 bits (285), Expect = 1e-23
 Identities = 51/92 (55%), Positives = 72/92 (78%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ ++++VR+N+P+T+ P+F     G D++I RHGIHGLYWLF+VDV G  L +
Sbjct: 546 RVAIASANLSELQVRINDPSTNRPLFSSGLIGRDNSIARHGIHGLYWLFNVDVPGARLVS 605

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSSS 52
           G+N I+LTQ +S+SPFQGI+YDYIR E P  S
Sbjct: 606 GDNTIFLTQPRSTSPFQGIMYDYIRFEGPPDS 637


>ref|XP_004288875.1| PREDICTED: rhamnogalacturonate lyase-like [Fragaria vesca subsp.
           vesca]
          Length = 640

 Score =  114 bits (285), Expect = 1e-23
 Identities = 50/95 (52%), Positives = 71/95 (74%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ ++++VRVN P  +PP+F     G D++I RHGIHGLYWL+ VD+  + L  
Sbjct: 546 RVAIASATLSELQVRVNNPKANPPLFTSGLIGKDNSIARHGIHGLYWLYKVDIPNSQLVQ 605

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSSSAPK 43
           G+N I+LTQ +S+ PFQGI+YDYIRLE P S++ K
Sbjct: 606 GDNTIFLTQPRSTGPFQGIMYDYIRLEGPPSASSK 640


>ref|XP_004501130.1| PREDICTED: rhamnogalacturonate lyase B-like [Cicer arietinum]
          Length = 682

 Score =  114 bits (284), Expect = 2e-23
 Identities = 50/90 (55%), Positives = 68/90 (75%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           RLA+A +  AQ+++R+N  N +PPIF  +  G ++ I RHGIHGLYWL+++DV G +L  
Sbjct: 580 RLALASAHFAQLQIRINNSNANPPIFSSEVIGKENTIARHGIHGLYWLYNIDVNGTLLVK 639

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPS 58
           G N I+LTQT ++SPF GILYDYIRLE P+
Sbjct: 640 GNNTIFLTQTNNASPFVGILYDYIRLEGPA 669


>ref|XP_004238544.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Solanum
           lycopersicum]
          Length = 640

 Score =  113 bits (283), Expect = 2e-23
 Identities = 53/92 (57%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNE-PNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLK 151
           RLA+A ++ A+++VR+N+  +T+ P+F     G D+AI RHGIHGLYWLF+V++QG +L 
Sbjct: 547 RLALASAAQAELQVRINDNSSTNTPLFSSGVIGKDNAIARHGIHGLYWLFNVNLQGTILV 606

Query: 150 TGENIIYLTQTKSSSPFQGILYDYIRLEAPSS 55
            GEN IYLTQ  ++SPFQGI+YDYIRLE P S
Sbjct: 607 EGENTIYLTQANATSPFQGIMYDYIRLEGPPS 638


>ref|XP_003628875.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355522897|gb|AET03351.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 684

 Score =  113 bits (282), Expect = 3e-23
 Identities = 50/91 (54%), Positives = 70/91 (76%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           +LA+A +++A ++VR N+P+  PP F     G D+AI RHGIHGL+WLF +DV  ++L  
Sbjct: 592 QLALASAADADLQVRFNDPSIYPPHFATGLIGGDNAIARHGIHGLHWLFSIDVPSDLLVK 651

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSS 55
           G+NI+YL Q+K+ SPFQG++YDYIRLE PSS
Sbjct: 652 GKNIVYLRQSKALSPFQGVMYDYIRLERPSS 682


>ref|XP_006433775.1| hypothetical protein CICLE_v10000543mg [Citrus clementina]
           gi|557535897|gb|ESR47015.1| hypothetical protein
           CICLE_v10000543mg [Citrus clementina]
          Length = 649

 Score =  112 bits (281), Expect = 4e-23
 Identities = 50/95 (52%), Positives = 72/95 (75%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ ++++VR+N+P+T+ P+F     G D++I RHGIHGLYWLF+VDV G  L +
Sbjct: 546 RVAIASANLSELQVRINDPSTNRPLFSSGLIGRDNSIARHGIHGLYWLFNVDVPGARLVS 605

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSSSAPK 43
           G+N I+  Q +S+SPFQGI+YDYIR E PS +  K
Sbjct: 606 GDNTIFFIQPRSTSPFQGIMYDYIRFEGPSDTTSK 640


>gb|AFD62270.1| rhamnogalacturonate lyase family protein, partial [Annona
           cherimola]
          Length = 256

 Score =  112 bits (281), Expect = 4e-23
 Identities = 51/95 (53%), Positives = 67/95 (70%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ ++++VR N+P   PP F     G D++I RHGI GLYWLFD+DV   +L  
Sbjct: 156 RVAIASATYSELQVRFNDPTADPPHFTTGEIGKDNSIARHGIRGLYWLFDIDVPAGVLVE 215

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSSSAPK 43
           G+N I+LTQ +S SPFQGILYDYIRLE P+    K
Sbjct: 216 GDNTIFLTQARSISPFQGILYDYIRLEGPADPNSK 250


>ref|XP_006306951.1| hypothetical protein CARUB_v10008518mg [Capsella rubella]
           gi|482575662|gb|EOA39849.1| hypothetical protein
           CARUB_v10008518mg [Capsella rubella]
          Length = 665

 Score =  112 bits (280), Expect = 5e-23
 Identities = 49/91 (53%), Positives = 70/91 (76%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+A+A S+ A+++VRVN+ + +PP+F  +  G D+ I RHGIHGLYWL++V+V  + L+ 
Sbjct: 568 RIALATSNVAELQVRVNDLSANPPLFTTEQIGRDNTIARHGIHGLYWLYNVNVPDSSLRL 627

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPSS 55
           G N IYLTQ  ++SPFQG++YDYIRLE P S
Sbjct: 628 GNNTIYLTQPLATSPFQGLMYDYIRLECPDS 658


>gb|EXC01184.1| hypothetical protein L484_025562 [Morus notabilis]
          Length = 1156

 Score =  112 bits (279), Expect = 7e-23
 Identities = 50/93 (53%), Positives = 73/93 (78%)
 Frame = -3

Query: 327  RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
            RLA+A ++ ++++VRVN+P  +PP+F     G D++I RHGIHGLY L++V+++G  L  
Sbjct: 1062 RLALASATFSELQVRVNDPKANPPLFTSGLIGRDNSIARHGIHGLYRLYNVNIKGTRLVG 1121

Query: 147  GENIIYLTQTKSSSPFQGILYDYIRLEAPSSSA 49
            G+N I+LTQ +SSSPFQGI+YDYIRLE P S++
Sbjct: 1122 GDNTIFLTQPRSSSPFQGIMYDYIRLEGPPSAS 1154



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 38/80 (47%), Positives = 59/80 (73%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+AIA ++ A+++VRVN+P T  P+F     G D+++ RHGIHGLYWL  +++ G+ L  
Sbjct: 440 RVAIASATLAELQVRVNDPKTRRPLFTTGLIGRDNSVARHGIHGLYWLHSINIPGDKLVE 499

Query: 147 GENIIYLTQTKSSSPFQGIL 88
           G+N ++LTQ + +SPFQGI+
Sbjct: 500 GDNTLFLTQPRCTSPFQGIM 519


>ref|XP_006366427.1| PREDICTED: probable rhamnogalacturonate lyase B-like isoform X1
           [Solanum tuberosum]
          Length = 640

 Score =  112 bits (279), Expect = 7e-23
 Identities = 48/90 (53%), Positives = 68/90 (75%)
 Frame = -3

Query: 327 RLAIAGSSNAQVEVRVNEPNTSPPIFVVDNTGTDSAITRHGIHGLYWLFDVDVQGNMLKT 148
           R+A+A S++A+++VR+N+P   PP+      G D+AI RH IHG+YWLF V + G++L  
Sbjct: 545 RVALAASNHAELQVRINDPTADPPLLSTGEIGGDNAIARHAIHGIYWLFTVTIPGSLLLG 604

Query: 147 GENIIYLTQTKSSSPFQGILYDYIRLEAPS 58
           GEN I+LTQ K+++ FQGI+YDYIRLE PS
Sbjct: 605 GENTIFLTQAKTANAFQGIMYDYIRLEGPS 634


Top