BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00036286
         (313 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26320.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
gb|EOY05819.1| Pentatricopeptide repeat superfamily protein [The...   102   4e-20
gb|EPS61188.1| hypothetical protein M569_13609 [Genlisea aurea]        98   1e-18
ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containi...    95   8e-18
ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
ref|NP_199192.1| pentatricopeptide repeat-containing protein [Ar...    93   4e-17
ref|XP_002863633.1| pentatricopeptide repeat-containing protein ...    92   5e-17
ref|XP_006403187.1| hypothetical protein EUTSA_v10003201mg [Eutr...    91   2e-16
ref|XP_006280433.1| hypothetical protein CARUB_v10026365mg [Caps...    88   1e-15
ref|XP_004488126.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    87   2e-15
ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
gb|ESW15100.1| hypothetical protein PHAVU_007G044100g [Phaseolus...    83   4e-14
ref|XP_003595326.1| Pentatricopeptide repeat-containing protein ...    82   7e-14
ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, p...    75   1e-11
emb|CBI15973.3| unnamed protein product [Vitis vinifera]               72   1e-10
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]    72   1e-10
ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t...    68   1e-09
ref|XP_002299231.1| pentatricopeptide repeat-containing family p...    66   5e-09

>emb|CBI26320.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  107 bits (266), Expect = 2e-21
 Identities = 52/89 (58%), Positives = 67/89 (75%)
 Frame = -1

Query: 277 MSKPNPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSY 98
           M  PNP+  + HP L LL+KC++L  LKQ+H  MITTGLI HTYPLS++LL+S+ I  ++
Sbjct: 1   MRGPNPS--SNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVFTH 58

Query: 97  SLSVFNQARNPTIFIYNTLISSLCNNNNH 11
           +LS+FN   NPTIF+YNTLISSL N   H
Sbjct: 59  ALSIFNHIPNPTIFLYNTLISSLANIKPH 87


>ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score =  107 bits (266), Expect = 2e-21
 Identities = 52/89 (58%), Positives = 67/89 (75%)
 Frame = -1

Query: 277 MSKPNPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSY 98
           M  PNP+  + HP L LL+KC++L  LKQ+H  MITTGLI HTYPLS++LL+S+ I  ++
Sbjct: 1   MRGPNPS--SNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVFTH 58

Query: 97  SLSVFNQARNPTIFIYNTLISSLCNNNNH 11
           +LS+FN   NPTIF+YNTLISSL N   H
Sbjct: 59  ALSIFNHIPNPTIFLYNTLISSLANIKPH 87


>gb|EOY05819.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 601

 Score =  102 bits (255), Expect = 4e-20
 Identities = 50/86 (58%), Positives = 64/86 (74%)
 Frame = -1

Query: 277 MSKPNPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSY 98
           M+  NP F  THP L  L KC++   LKQ+H QMITTGL LHTYPLS+LL +SA +  S+
Sbjct: 1   MNSSNPIF--THPTLNYLSKCKTFYSLKQVHAQMITTGLTLHTYPLSKLLYVSATLALSH 58

Query: 97  SLSVFNQARNPTIFIYNTLISSLCNN 20
           +L++FNQ  NPTIF++NTLISS+  N
Sbjct: 59  ALAIFNQIPNPTIFLFNTLISSIITN 84


>gb|EPS61188.1| hypothetical protein M569_13609 [Genlisea aurea]
          Length = 478

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -1

Query: 244 HPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEP-SYSLSVFNQARN 68
           HP+L LL  C +L  LKQIHGQ I  GLILHTYP+S+LLL+S+++   SY+L++FN+  N
Sbjct: 7   HPLLTLLNSCTTLHTLKQIHGQFILNGLILHTYPISRLLLVSSSLASISYTLAIFNRVLN 66

Query: 67  PTIFIYNTLISSLCNNNNH 11
           PTIF+YNTLISS C  N H
Sbjct: 67  PTIFLYNTLISS-CIRNGH 84


>ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Solanum tuberosum]
          Length = 602

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 43/75 (57%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
 Frame = -1

Query: 250 TTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEP--SYSLSVFNQ 77
           + HPI  L+++C+++  LKQ+H QMITTGLI HTYPLS++L+ S+ I+   SY+LS+FN 
Sbjct: 8   SAHPIFKLIEQCKNIATLKQVHAQMITTGLIFHTYPLSRILISSSTIDATISYALSIFNH 67

Query: 76  ARNPTIFIYNTLISS 32
             NPTIF++NTLISS
Sbjct: 68  VTNPTIFLFNTLISS 82


>ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Solanum lycopersicum]
          Length = 602

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 42/75 (56%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
 Frame = -1

Query: 250 TTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEP--SYSLSVFNQ 77
           + HPI  ++++C+++  LKQ+H QMITTGLI HTYPLS++L+ S+ I+   SY+LS+FN 
Sbjct: 8   SAHPIFKIIEQCKNIATLKQVHAQMITTGLIFHTYPLSRILISSSTIDATISYALSIFNH 67

Query: 76  ARNPTIFIYNTLISS 32
             NPTIF++NTLISS
Sbjct: 68  VTNPTIFLFNTLISS 82


>ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g43790 gi|10177948|dbj|BAB11307.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332007627|gb|AED95010.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 460

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/84 (53%), Positives = 62/84 (73%)
 Frame = -1

Query: 265 NPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLSV 86
           +P+    H  L L+ KC+SL+ LKQIH Q+IT GL  HTYPLS+LL LS+ +  SY+LS+
Sbjct: 3   SPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSI 62

Query: 85  FNQARNPTIFIYNTLISSLCNNNN 14
             Q  NP++F+YNTLISS+ +N+N
Sbjct: 63  LRQIPNPSVFLYNTLISSIVSNHN 86


>ref|XP_002863633.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309468|gb|EFH39892.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 460

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 45/84 (53%), Positives = 62/84 (73%)
 Frame = -1

Query: 265 NPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLSV 86
           +P+    H  L L+ KC+SL+ LKQIH Q+IT GL  HTYPLS+LL LS+ +  SY+LS+
Sbjct: 3   SPSTSKNHRCLNLIPKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSI 62

Query: 85  FNQARNPTIFIYNTLISSLCNNNN 14
             Q  NP++F+YNTLISS+ +N+N
Sbjct: 63  LRQIPNPSVFLYNTLISSIVSNHN 86


>ref|XP_006403187.1| hypothetical protein EUTSA_v10003201mg [Eutrema salsugineum]
           gi|557104300|gb|ESQ44640.1| hypothetical protein
           EUTSA_v10003201mg [Eutrema salsugineum]
          Length = 467

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/83 (50%), Positives = 62/83 (74%)
 Frame = -1

Query: 265 NPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLSV 86
           +P+    H  L L+ KC++L+ LKQIH Q +T GL  HT+PLS+LLLLS+ +  SY+LS+
Sbjct: 3   SPSTSNNHRCLNLISKCKTLENLKQIHAQFLTIGLSHHTFPLSKLLLLSSTVCLSYALSI 62

Query: 85  FNQARNPTIFIYNTLISSLCNNN 17
           F +  NP++F+YNTLISS+ +N+
Sbjct: 63  FRRIANPSVFLYNTLISSIVSNH 85


>ref|XP_006280433.1| hypothetical protein CARUB_v10026365mg [Capsella rubella]
           gi|482549137|gb|EOA13331.1| hypothetical protein
           CARUB_v10026365mg [Capsella rubella]
          Length = 461

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/85 (52%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = -1

Query: 265 NPTFITTHPILALLKKCR-SLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLS 89
           +P+    H  L L+ KC  SL+ LKQIH Q+ITTGL  HTYPLS+LL LS+ +  SY+LS
Sbjct: 3   SPSTSKNHRCLNLIPKCNNSLQNLKQIHAQIITTGLSHHTYPLSKLLHLSSTVCLSYALS 62

Query: 88  VFNQARNPTIFIYNTLISSLCNNNN 14
           +  Q  NP++F+YNTLISS+ +N++
Sbjct: 63  ILRQISNPSVFLYNTLISSIVSNHD 87


>ref|XP_004488126.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g43790-like, partial [Cicer arietinum]
          Length = 632

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 46/95 (48%), Positives = 61/95 (64%)
 Frame = -1

Query: 298 LNFLSHSMSKPNPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLS 119
           LNF+   M   +P F   HP L  L+KC +L  LKQIH Q++TTGL   TY LS L+ +S
Sbjct: 29  LNFIDF-MKPQSPIF--NHPTLLKLQKCNNLNTLKQIHAQIVTTGLSFQTYCLSHLINIS 85

Query: 118 AAIEPSYSLSVFNQARNPTIFIYNTLISSLCNNNN 14
           +     Y+ ++FN   NPTIF+YNTLISSL N ++
Sbjct: 86  SKFNLPYACTIFNYIPNPTIFLYNTLISSLINQHS 120


>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Glycine max]
          Length = 591

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 40/77 (51%), Positives = 55/77 (71%)
 Frame = -1

Query: 244 HPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLSVFNQARNP 65
           HPIL  L+KC +L  LKQ+H QM+TTGL   TY LS LL  S+    +Y+ ++FN   NP
Sbjct: 6   HPILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFASTYAFTIFNHIPNP 65

Query: 64  TIFIYNTLISSLCNNNN 14
           T+F+YNTLISSL ++++
Sbjct: 66  TLFLYNTLISSLTHHSD 82


>gb|ESW15100.1| hypothetical protein PHAVU_007G044100g [Phaseolus vulgaris]
          Length = 510

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 38/80 (47%), Positives = 54/80 (67%)
 Frame = -1

Query: 253 ITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLSVFNQA 74
           ++ HPIL  L+KC SL  LKQ+H  M+ TGL L TY LS LL  S+    +Y++++FN  
Sbjct: 1   MSNHPILQKLQKCHSLNTLKQVHALMVATGLSLQTYYLSHLLNTSSKFSSTYAITIFNSI 60

Query: 73  RNPTIFIYNTLISSLCNNNN 14
            +PT+F+YNTLISS   + +
Sbjct: 61  PSPTVFLYNTLISSFTRHTH 80


>ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484374|gb|AES65577.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 740

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
 Frame = -1

Query: 295 NFLSHSMSKPNPTFITTHPILALLK-KCRSLKILKQIHGQMITTGLILHTYPLSQLLLLS 119
           NFL     K +   I  HP L  L+ KC +   LKQIH Q+ITTGL   TY LS L+ +S
Sbjct: 135 NFLDFMKPKNH---IFNHPTLQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIKIS 191

Query: 118 AAIEPSYSLSVFNQARNPTIFIYNTLISSLCNNNN 14
           +     Y+  +FN   NPTIF+YNTLISSL N  N
Sbjct: 192 SKFNLPYAFKIFNYISNPTIFLYNTLISSLINQTN 226


>ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, partial [Amborella
           trichopoda] gi|548860532|gb|ERN18110.1| hypothetical
           protein AMTR_s01859p00006880, partial [Amborella
           trichopoda]
          Length = 190

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 9/110 (8%)
 Frame = -1

Query: 304 PSLNFLSHSMSKPNPTFITT-----HPILALLKKCRSLKILKQIHGQMITTGLILHTYPL 140
           P L+  + +  KPN +  ++     HP L LL++C++ K L QIH  +I  GLI H YPL
Sbjct: 9   PKLSLSTQTNPKPNNSNSSSKQFSDHPSLILLERCKNTKQLPQIHAHLIRLGLIFHPYPL 68

Query: 139 SQLLLLSAAIEP----SYSLSVFNQARNPTIFIYNTLISSLCNNNNHRNS 2
           S+LL +SA        SY+L +F Q   P +++YNT+I +  ++ +  N+
Sbjct: 69  SRLLTISALSNSENALSYALKIFEQIPQPNLYMYNTIIRAHASSRSPENA 118


>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 14/116 (12%)
 Frame = -1

Query: 307 NPSLNFL--SHSMSKPNPTFIT--------THPILALLKKCRSLKILKQIHGQMITTGLI 158
           NP L  L  SHS+  PNP  IT         HP L+L+ +C   K LKQIH QM+ TGL 
Sbjct: 5   NPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLF 64

Query: 157 LHTYPLSQLLLLSAAIEP----SYSLSVFNQARNPTIFIYNTLISSLCNNNNHRNS 2
              +  S+ L+ +AA+ P     Y+  VF+Q  +P ++ +NTLI +  +++N   S
Sbjct: 65  FDPFSASR-LITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQS 119


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 14/116 (12%)
 Frame = -1

Query: 307 NPSLNFL--SHSMSKPNPTFIT--------THPILALLKKCRSLKILKQIHGQMITTGLI 158
           NP L  L  SHS+  PNP  IT         HP L+L+ +C   K LKQIH QM+ TGL 
Sbjct: 5   NPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLF 64

Query: 157 LHTYPLSQLLLLSAAIEP----SYSLSVFNQARNPTIFIYNTLISSLCNNNNHRNS 2
              +  S+ L+ +AA+ P     Y+  VF+Q  +P ++ +NTLI +  +++N   S
Sbjct: 65  FDPFSASR-LITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQS 119


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 14/116 (12%)
 Frame = -1

Query: 307 NPSLNFL--SHSMSKPNPTFIT--------THPILALLKKCRSLKILKQIHGQMITTGLI 158
           NP L  L  SHS+  PNP  IT         HP L+L+ +C   K LKQIH QM+ TGL 
Sbjct: 5   NPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLF 64

Query: 157 LHTYPLSQLLLLSAAIEP----SYSLSVFNQARNPTIFIYNTLISSLCNNNNHRNS 2
              +  S+ L+ +AA+ P     Y+  VF+Q  +P ++ +NTLI +  +++N   S
Sbjct: 65  FDPFSASR-LITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQS 119


>ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355515352|gb|AES96975.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 525

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
 Frame = -1

Query: 250 TTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEP-----SYSLSV 86
           +T   L LL+KC+S+K LKQ H Q+ TTGL  +T+ LS++L   ++ +      +Y+  V
Sbjct: 4   STKRCLVLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRV 63

Query: 85  FNQARNPTIFIYNTLISSLCNNNNHRNS 2
           F Q +NPT+ IYNTLI +   NN  +++
Sbjct: 64  FEQIQNPTVCIYNTLIKAFLVNNKFKSA 91


>ref|XP_002299231.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222846489|gb|EEE84036.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 668

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 12/107 (11%)
 Frame = -1

Query: 298 LNFLSHSMS--KPNPT-------FITTHPILALLKKCRSLKILKQIHGQMITTGLILHTY 146
           L+  SHS S  K NPT       ++ ++P+L+LL+ C+S   LKQI  QMI TGLIL  +
Sbjct: 27  LSLHSHSFSTHKSNPTSWNTTHTYVLSNPLLSLLENCKSFSQLKQIQAQMILTGLILDGF 86

Query: 145 PLSQLLLLSAAIEP---SYSLSVFNQARNPTIFIYNTLISSLCNNNN 14
             S+L+   A  E     Y + + N  +NP +F +N +I     + N
Sbjct: 87  ASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAVIRGCVESEN 133