BLASTX nr result
ID: Rheum21_contig00036286
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00036286 (313 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26320.3| unnamed protein product [Vitis vinifera] 107 2e-21 ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21 gb|EOY05819.1| Pentatricopeptide repeat superfamily protein [The... 102 4e-20 gb|EPS61188.1| hypothetical protein M569_13609 [Genlisea aurea] 98 1e-18 ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containi... 95 8e-18 ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17 ref|NP_199192.1| pentatricopeptide repeat-containing protein [Ar... 93 4e-17 ref|XP_002863633.1| pentatricopeptide repeat-containing protein ... 92 5e-17 ref|XP_006403187.1| hypothetical protein EUTSA_v10003201mg [Eutr... 91 2e-16 ref|XP_006280433.1| hypothetical protein CARUB_v10026365mg [Caps... 88 1e-15 ref|XP_004488126.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 87 2e-15 ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi... 86 4e-15 gb|ESW15100.1| hypothetical protein PHAVU_007G044100g [Phaseolus... 83 4e-14 ref|XP_003595326.1| Pentatricopeptide repeat-containing protein ... 82 7e-14 ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, p... 75 1e-11 emb|CBI15973.3| unnamed protein product [Vitis vinifera] 72 1e-10 ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10 emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] 72 1e-10 ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t... 68 1e-09 ref|XP_002299231.1| pentatricopeptide repeat-containing family p... 66 5e-09 >emb|CBI26320.3| unnamed protein product [Vitis vinifera] Length = 522 Score = 107 bits (266), Expect = 2e-21 Identities = 52/89 (58%), Positives = 67/89 (75%) Frame = -1 Query: 277 MSKPNPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSY 98 M PNP+ + HP L LL+KC++L LKQ+H MITTGLI HTYPLS++LL+S+ I ++ Sbjct: 1 MRGPNPS--SNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVFTH 58 Query: 97 SLSVFNQARNPTIFIYNTLISSLCNNNNH 11 +LS+FN NPTIF+YNTLISSL N H Sbjct: 59 ALSIFNHIPNPTIFLYNTLISSLANIKPH 87 >ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein At5g43790-like [Vitis vinifera] Length = 590 Score = 107 bits (266), Expect = 2e-21 Identities = 52/89 (58%), Positives = 67/89 (75%) Frame = -1 Query: 277 MSKPNPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSY 98 M PNP+ + HP L LL+KC++L LKQ+H MITTGLI HTYPLS++LL+S+ I ++ Sbjct: 1 MRGPNPS--SNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVFTH 58 Query: 97 SLSVFNQARNPTIFIYNTLISSLCNNNNH 11 +LS+FN NPTIF+YNTLISSL N H Sbjct: 59 ALSIFNHIPNPTIFLYNTLISSLANIKPH 87 >gb|EOY05819.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao] Length = 601 Score = 102 bits (255), Expect = 4e-20 Identities = 50/86 (58%), Positives = 64/86 (74%) Frame = -1 Query: 277 MSKPNPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSY 98 M+ NP F THP L L KC++ LKQ+H QMITTGL LHTYPLS+LL +SA + S+ Sbjct: 1 MNSSNPIF--THPTLNYLSKCKTFYSLKQVHAQMITTGLTLHTYPLSKLLYVSATLALSH 58 Query: 97 SLSVFNQARNPTIFIYNTLISSLCNN 20 +L++FNQ NPTIF++NTLISS+ N Sbjct: 59 ALAIFNQIPNPTIFLFNTLISSIITN 84 >gb|EPS61188.1| hypothetical protein M569_13609 [Genlisea aurea] Length = 478 Score = 97.8 bits (242), Expect = 1e-18 Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 1/79 (1%) Frame = -1 Query: 244 HPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEP-SYSLSVFNQARN 68 HP+L LL C +L LKQIHGQ I GLILHTYP+S+LLL+S+++ SY+L++FN+ N Sbjct: 7 HPLLTLLNSCTTLHTLKQIHGQFILNGLILHTYPISRLLLVSSSLASISYTLAIFNRVLN 66 Query: 67 PTIFIYNTLISSLCNNNNH 11 PTIF+YNTLISS C N H Sbjct: 67 PTIFLYNTLISS-CIRNGH 84 >ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containing protein At5g43790-like [Solanum tuberosum] Length = 602 Score = 95.1 bits (235), Expect = 8e-18 Identities = 43/75 (57%), Positives = 60/75 (80%), Gaps = 2/75 (2%) Frame = -1 Query: 250 TTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEP--SYSLSVFNQ 77 + HPI L+++C+++ LKQ+H QMITTGLI HTYPLS++L+ S+ I+ SY+LS+FN Sbjct: 8 SAHPIFKLIEQCKNIATLKQVHAQMITTGLIFHTYPLSRILISSSTIDATISYALSIFNH 67 Query: 76 ARNPTIFIYNTLISS 32 NPTIF++NTLISS Sbjct: 68 VTNPTIFLFNTLISS 82 >ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containing protein At5g43790-like [Solanum lycopersicum] Length = 602 Score = 94.4 bits (233), Expect = 1e-17 Identities = 42/75 (56%), Positives = 60/75 (80%), Gaps = 2/75 (2%) Frame = -1 Query: 250 TTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEP--SYSLSVFNQ 77 + HPI ++++C+++ LKQ+H QMITTGLI HTYPLS++L+ S+ I+ SY+LS+FN Sbjct: 8 SAHPIFKIIEQCKNIATLKQVHAQMITTGLIFHTYPLSRILISSSTIDATISYALSIFNH 67 Query: 76 ARNPTIFIYNTLISS 32 NPTIF++NTLISS Sbjct: 68 VTNPTIFLFNTLISS 82 >ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g43790 gi|10177948|dbj|BAB11307.1| unnamed protein product [Arabidopsis thaliana] gi|332007627|gb|AED95010.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 460 Score = 92.8 bits (229), Expect = 4e-17 Identities = 45/84 (53%), Positives = 62/84 (73%) Frame = -1 Query: 265 NPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLSV 86 +P+ H L L+ KC+SL+ LKQIH Q+IT GL HTYPLS+LL LS+ + SY+LS+ Sbjct: 3 SPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSI 62 Query: 85 FNQARNPTIFIYNTLISSLCNNNN 14 Q NP++F+YNTLISS+ +N+N Sbjct: 63 LRQIPNPSVFLYNTLISSIVSNHN 86 >ref|XP_002863633.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297309468|gb|EFH39892.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 460 Score = 92.4 bits (228), Expect = 5e-17 Identities = 45/84 (53%), Positives = 62/84 (73%) Frame = -1 Query: 265 NPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLSV 86 +P+ H L L+ KC+SL+ LKQIH Q+IT GL HTYPLS+LL LS+ + SY+LS+ Sbjct: 3 SPSTSKNHRCLNLIPKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSI 62 Query: 85 FNQARNPTIFIYNTLISSLCNNNN 14 Q NP++F+YNTLISS+ +N+N Sbjct: 63 LRQIPNPSVFLYNTLISSIVSNHN 86 >ref|XP_006403187.1| hypothetical protein EUTSA_v10003201mg [Eutrema salsugineum] gi|557104300|gb|ESQ44640.1| hypothetical protein EUTSA_v10003201mg [Eutrema salsugineum] Length = 467 Score = 90.9 bits (224), Expect = 2e-16 Identities = 42/83 (50%), Positives = 62/83 (74%) Frame = -1 Query: 265 NPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLSV 86 +P+ H L L+ KC++L+ LKQIH Q +T GL HT+PLS+LLLLS+ + SY+LS+ Sbjct: 3 SPSTSNNHRCLNLISKCKTLENLKQIHAQFLTIGLSHHTFPLSKLLLLSSTVCLSYALSI 62 Query: 85 FNQARNPTIFIYNTLISSLCNNN 17 F + NP++F+YNTLISS+ +N+ Sbjct: 63 FRRIANPSVFLYNTLISSIVSNH 85 >ref|XP_006280433.1| hypothetical protein CARUB_v10026365mg [Capsella rubella] gi|482549137|gb|EOA13331.1| hypothetical protein CARUB_v10026365mg [Capsella rubella] Length = 461 Score = 87.8 bits (216), Expect = 1e-15 Identities = 45/85 (52%), Positives = 62/85 (72%), Gaps = 1/85 (1%) Frame = -1 Query: 265 NPTFITTHPILALLKKCR-SLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLS 89 +P+ H L L+ KC SL+ LKQIH Q+ITTGL HTYPLS+LL LS+ + SY+LS Sbjct: 3 SPSTSKNHRCLNLIPKCNNSLQNLKQIHAQIITTGLSHHTYPLSKLLHLSSTVCLSYALS 62 Query: 88 VFNQARNPTIFIYNTLISSLCNNNN 14 + Q NP++F+YNTLISS+ +N++ Sbjct: 63 ILRQISNPSVFLYNTLISSIVSNHD 87 >ref|XP_004488126.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g43790-like, partial [Cicer arietinum] Length = 632 Score = 87.4 bits (215), Expect = 2e-15 Identities = 46/95 (48%), Positives = 61/95 (64%) Frame = -1 Query: 298 LNFLSHSMSKPNPTFITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLS 119 LNF+ M +P F HP L L+KC +L LKQIH Q++TTGL TY LS L+ +S Sbjct: 29 LNFIDF-MKPQSPIF--NHPTLLKLQKCNNLNTLKQIHAQIVTTGLSFQTYCLSHLINIS 85 Query: 118 AAIEPSYSLSVFNQARNPTIFIYNTLISSLCNNNN 14 + Y+ ++FN NPTIF+YNTLISSL N ++ Sbjct: 86 SKFNLPYACTIFNYIPNPTIFLYNTLISSLINQHS 120 >ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein At5g43790-like [Glycine max] Length = 591 Score = 86.3 bits (212), Expect = 4e-15 Identities = 40/77 (51%), Positives = 55/77 (71%) Frame = -1 Query: 244 HPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLSVFNQARNP 65 HPIL L+KC +L LKQ+H QM+TTGL TY LS LL S+ +Y+ ++FN NP Sbjct: 6 HPILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFASTYAFTIFNHIPNP 65 Query: 64 TIFIYNTLISSLCNNNN 14 T+F+YNTLISSL ++++ Sbjct: 66 TLFLYNTLISSLTHHSD 82 >gb|ESW15100.1| hypothetical protein PHAVU_007G044100g [Phaseolus vulgaris] Length = 510 Score = 82.8 bits (203), Expect = 4e-14 Identities = 38/80 (47%), Positives = 54/80 (67%) Frame = -1 Query: 253 ITTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEPSYSLSVFNQA 74 ++ HPIL L+KC SL LKQ+H M+ TGL L TY LS LL S+ +Y++++FN Sbjct: 1 MSNHPILQKLQKCHSLNTLKQVHALMVATGLSLQTYYLSHLLNTSSKFSSTYAITIFNSI 60 Query: 73 RNPTIFIYNTLISSLCNNNN 14 +PT+F+YNTLISS + + Sbjct: 61 PSPTVFLYNTLISSFTRHTH 80 >ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 740 Score = 82.0 bits (201), Expect = 7e-14 Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Frame = -1 Query: 295 NFLSHSMSKPNPTFITTHPILALLK-KCRSLKILKQIHGQMITTGLILHTYPLSQLLLLS 119 NFL K + I HP L L+ KC + LKQIH Q+ITTGL TY LS L+ +S Sbjct: 135 NFLDFMKPKNH---IFNHPTLQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIKIS 191 Query: 118 AAIEPSYSLSVFNQARNPTIFIYNTLISSLCNNNN 14 + Y+ +FN NPTIF+YNTLISSL N N Sbjct: 192 SKFNLPYAFKIFNYISNPTIFLYNTLISSLINQTN 226 >ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, partial [Amborella trichopoda] gi|548860532|gb|ERN18110.1| hypothetical protein AMTR_s01859p00006880, partial [Amborella trichopoda] Length = 190 Score = 74.7 bits (182), Expect = 1e-11 Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 9/110 (8%) Frame = -1 Query: 304 PSLNFLSHSMSKPNPTFITT-----HPILALLKKCRSLKILKQIHGQMITTGLILHTYPL 140 P L+ + + KPN + ++ HP L LL++C++ K L QIH +I GLI H YPL Sbjct: 9 PKLSLSTQTNPKPNNSNSSSKQFSDHPSLILLERCKNTKQLPQIHAHLIRLGLIFHPYPL 68 Query: 139 SQLLLLSAAIEP----SYSLSVFNQARNPTIFIYNTLISSLCNNNNHRNS 2 S+LL +SA SY+L +F Q P +++YNT+I + ++ + N+ Sbjct: 69 SRLLTISALSNSENALSYALKIFEQIPQPNLYMYNTIIRAHASSRSPENA 118 >emb|CBI15973.3| unnamed protein product [Vitis vinifera] Length = 652 Score = 71.6 bits (174), Expect = 1e-10 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 14/116 (12%) Frame = -1 Query: 307 NPSLNFL--SHSMSKPNPTFIT--------THPILALLKKCRSLKILKQIHGQMITTGLI 158 NP L L SHS+ PNP IT HP L+L+ +C K LKQIH QM+ TGL Sbjct: 5 NPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLF 64 Query: 157 LHTYPLSQLLLLSAAIEP----SYSLSVFNQARNPTIFIYNTLISSLCNNNNHRNS 2 + S+ L+ +AA+ P Y+ VF+Q +P ++ +NTLI + +++N S Sbjct: 65 FDPFSASR-LITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQS 119 >ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Vitis vinifera] Length = 743 Score = 71.6 bits (174), Expect = 1e-10 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 14/116 (12%) Frame = -1 Query: 307 NPSLNFL--SHSMSKPNPTFIT--------THPILALLKKCRSLKILKQIHGQMITTGLI 158 NP L L SHS+ PNP IT HP L+L+ +C K LKQIH QM+ TGL Sbjct: 5 NPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLF 64 Query: 157 LHTYPLSQLLLLSAAIEP----SYSLSVFNQARNPTIFIYNTLISSLCNNNNHRNS 2 + S+ L+ +AA+ P Y+ VF+Q +P ++ +NTLI + +++N S Sbjct: 65 FDPFSASR-LITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQS 119 >emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] Length = 694 Score = 71.6 bits (174), Expect = 1e-10 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 14/116 (12%) Frame = -1 Query: 307 NPSLNFL--SHSMSKPNPTFIT--------THPILALLKKCRSLKILKQIHGQMITTGLI 158 NP L L SHS+ PNP IT HP L+L+ +C K LKQIH QM+ TGL Sbjct: 5 NPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLF 64 Query: 157 LHTYPLSQLLLLSAAIEP----SYSLSVFNQARNPTIFIYNTLISSLCNNNNHRNS 2 + S+ L+ +AA+ P Y+ VF+Q +P ++ +NTLI + +++N S Sbjct: 65 FDPFSASR-LITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQS 119 >ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula] gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula] Length = 525 Score = 68.2 bits (165), Expect = 1e-09 Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 5/88 (5%) Frame = -1 Query: 250 TTHPILALLKKCRSLKILKQIHGQMITTGLILHTYPLSQLLLLSAAIEP-----SYSLSV 86 +T L LL+KC+S+K LKQ H Q+ TTGL +T+ LS++L ++ + +Y+ V Sbjct: 4 STKRCLVLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRV 63 Query: 85 FNQARNPTIFIYNTLISSLCNNNNHRNS 2 F Q +NPT+ IYNTLI + NN +++ Sbjct: 64 FEQIQNPTVCIYNTLIKAFLVNNKFKSA 91 >ref|XP_002299231.1| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|222846489|gb|EEE84036.1| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 668 Score = 65.9 bits (159), Expect = 5e-09 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 12/107 (11%) Frame = -1 Query: 298 LNFLSHSMS--KPNPT-------FITTHPILALLKKCRSLKILKQIHGQMITTGLILHTY 146 L+ SHS S K NPT ++ ++P+L+LL+ C+S LKQI QMI TGLIL + Sbjct: 27 LSLHSHSFSTHKSNPTSWNTTHTYVLSNPLLSLLENCKSFSQLKQIQAQMILTGLILDGF 86 Query: 145 PLSQLLLLSAAIEP---SYSLSVFNQARNPTIFIYNTLISSLCNNNN 14 S+L+ A E Y + + N +NP +F +N +I + N Sbjct: 87 ASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAVIRGCVESEN 133