BLASTX nr result

ID: Rheum21_contig00035452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00035452
         (283 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]    49   3e-08

>ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis]
           gi|223542494|gb|EEF44034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -2

Query: 282 CTMFRFTDKEDRVGVGVYDMRLKYDPRRYMLTMGRKQEALFK 157
           CTMFRFTDKEDRV VGVY++ LKYDP RYMLTMGRKQE L K
Sbjct: 390 CTMFRFTDKEDRVRVGVYNVILKYDPGRYMLTMGRKQEPLCK 431


>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 49.3 bits (116), Expect(2) = 3e-08
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +3

Query: 6   PPTDRSTPITLRTVQDSYRLSYGFLTS 86
           PPTDRSTPIT RTVQDSY LSYG+L++
Sbjct: 302 PPTDRSTPITPRTVQDSYHLSYGWLSN 328



 Score = 34.3 bits (77), Expect(2) = 3e-08
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = +2

Query: 74  LSNFTSFSGRSALSIDG*YKRSVTSRNS 157
           LSNFTSFSGRSALSID    R++  R S
Sbjct: 326 LSNFTSFSGRSALSID--VNRNIVHRYS 351


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