BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00035265
         (356 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               87   2e-15
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    87   2e-15
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...    87   2e-15
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    87   3e-15
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    86   5e-15
gb|ABK28199.1| unknown [Arabidopsis thaliana]                          86   5e-15
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali...    86   5e-15
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali...    86   7e-15
gb|AAG12669.1|AC027033_4 hypothetical protein; 81517-79153 [Arab...    84   2e-14
gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]             84   3e-14
gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]               83   3e-14
gb|ABW81036.1| unknown [Arabidopsis lyrata subsp. lyrata]              82   7e-14
gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]                81   2e-13
gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thali...    81   2e-13
ref|XP_006468253.1| PREDICTED: uncharacterized protein LOC102614...    79   5e-13
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    79   8e-13
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A...    77   2e-12
gb|AAD14501.1| Hypothetical protein [Arabidopsis thaliana]             76   4e-12
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    76   4e-12
gb|ABK28138.1| unknown [Arabidopsis thaliana]                          76   4e-12

>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 43/93 (46%), Positives = 58/93 (62%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWGV  GL  AW+    +V LE+DS++ VG LK  +   HP+  LV+   G
Sbjct: 606 GRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHG 665

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
           F  KDW ++   V REA  +A+ L +YAFS+S+
Sbjct: 666 FLQKDWLVRIVHVYREANRLADGLANYAFSLSL 698


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 43/93 (46%), Positives = 58/93 (62%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWGV  GL  AW+    +V LE+DS++ VG LK  +   HP+  LV+   G
Sbjct: 497 GRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHG 556

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
           F  KDW ++   V REA  +A+ L +YAFS+S+
Sbjct: 557 FLQKDWLVRIVHVYREANRLADGLANYAFSLSL 589


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 970

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/93 (44%), Positives = 57/93 (61%)
 Frame = -1

Query: 356  GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
            G+C  P AELWG   GL +AWD  F +V L +DS+L VG L   +   HP+  LV+  QG
Sbjct: 847  GSCDAPLAELWGAYYGLLIAWDKGFRRVELNLDSELVVGFLSTGISKAHPLSFLVRLCQG 906

Query: 176  FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
            FF +DW ++   V REA  +A+ L +YAF + +
Sbjct: 907  FFTRDWLVRVSHVYREANRLADGLANYAFFLPL 939


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/93 (43%), Positives = 59/93 (63%)
 Frame = -1

Query: 356  GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
            G+C+ P AELWG   GL +AWD  F +V L++D +L VG L   +   HP+  LV+  QG
Sbjct: 1108 GSCAAPLAELWGAYYGLLIAWDKGFRRVELDLDCKLVVGFLSTGVSNAHPLSFLVRLCQG 1167

Query: 176  FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
            FF +DW ++   V REA  +A+ L +YAF++ +
Sbjct: 1168 FFTRDWLVRVSHVYREANRLADGLANYAFTLPL 1200


>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 676

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 41/91 (45%), Positives = 57/91 (62%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWGV  GL +AW+  + +V LE+DS L VG L+  +   HP+  LV+   G
Sbjct: 553 GVCSAPLAELWGVYYGLVVAWERGWRRVRLEVDSALVVGFLQSGIGDSHPLAFLVRLCHG 612

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSI 84
           F  KDW ++   V REA  +A+ L +YAF++
Sbjct: 613 FISKDWIVRITHVYREANRLADGLANYAFTL 643


>gb|ABK28199.1| unknown [Arabidopsis thaliana]
          Length = 315

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/93 (41%), Positives = 58/93 (62%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWGV  GL +AW+    ++ +E+DS++ VG LK  +   HP+  LV+    
Sbjct: 191 GVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHD 250

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
           F  +DWR++   V REA  +A+ L +YAFS+ +
Sbjct: 251 FISRDWRVRISHVYREANRLADGLANYAFSLPL 283


>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|20197456|gb|AAM15081.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 314

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/93 (41%), Positives = 58/93 (62%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWGV  GL +AW+    ++ +E+DS++ VG LK  +   HP+  LV+    
Sbjct: 191 GVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHD 250

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
           F  +DWR++   V REA  +A+ L +YAFS+ +
Sbjct: 251 FISRDWRVRISHVYREANRLADGLANYAFSLPL 283


>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
          Length = 314

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 39/93 (41%), Positives = 58/93 (62%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWGV  GL +AW+    ++ +E+DS++ VG LK  +   HP+  LV+    
Sbjct: 191 GVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKIXINEVHPLSFLVRLCHD 250

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
           F  +DWR++   V REA  +A+ L +YAFS+ +
Sbjct: 251 FISRDWRVRISHVYREANRLADGLANYAFSLPL 283


>gb|AAG12669.1|AC027033_4 hypothetical protein; 81517-79153 [Arabidopsis thaliana]
          Length = 256

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/93 (43%), Positives = 57/93 (61%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWGV  GL +AW+    +V LE+DS++ VG LK  +   HP+  L +   G
Sbjct: 52  GICSAPQAELWGVYYGLYIAWEKWVTRVELEVDSEIVVGFLKTGIGDSHPLSFLARLCYG 111

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
           F  KDW ++   V REA  +A+ L +YAF++ +
Sbjct: 112 FISKDWIVRISHVYREANRLADGLANYAFTLPL 144


>gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]
          Length = 803

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 42/93 (45%), Positives = 55/93 (59%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWGV  G  LAW     +V LE+DS+L VG LK  +   HP+  LV+   G
Sbjct: 680 GRCSAPLAELWGVYYGFYLAWTKALTRVELEVDSELVVGFLKTGIGDQHPLSFLVRLCHG 739

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
              KDW ++   V REA  +A+ L +YAFS+ +
Sbjct: 740 LLSKDWIVRITHVYREANRLADGLANYAFSLPL 772


>gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]
          Length = 233

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 38/93 (40%), Positives = 56/93 (60%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G C  P AELWGV  GL +AWD    ++ LE+DS++ VG L+  +   HP+  LV+   G
Sbjct: 110 GRCLAPLAELWGVYYGLFMAWDRGITRLELEVDSEMVVGFLRTGIGSSHPLSFLVRMCHG 169

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
           F  +DW ++   V REA  +A+ L +YAF + +
Sbjct: 170 FLSRDWIVRIGHVYREANRLADGLANYAFDLPL 202


>gb|ABW81036.1| unknown [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 39/93 (41%), Positives = 54/93 (58%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWGV  GL  AW+H   ++ LE+DS L VG L   +   HP+  LV+   G
Sbjct: 49  GRCSAPLAELWGVYYGLYTAWEHRVTRLVLEVDSSLVVGFLTTGIGDSHPLSILVRLCYG 108

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
           F  +DW ++   V R+A   A+ L +Y FS+ +
Sbjct: 109 FIARDWIVRVTHVYRKANRFADGLANYVFSLPL 141


>gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]
          Length = 253

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 37/93 (39%), Positives = 55/93 (59%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWG   GL +AW+    ++ +EIDS++ VG L+  +   HP+  LV+   G
Sbjct: 130 GICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHG 189

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
              KDW ++   V REA  +A+ L +YAF + +
Sbjct: 190 LLSKDWSVRISHVYREANRLADGLANYAFFLPL 222


>gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thaliana]
           gi|55978717|gb|AAV68820.1| hypothetical protein
           AT1G17390 [Arabidopsis thaliana]
          Length = 272

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 37/93 (39%), Positives = 55/93 (59%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWG   GL +AW+    ++ +EIDS++ VG L+  +   HP+  LV+   G
Sbjct: 149 GICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHG 208

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
              KDW ++   V REA  +A+ L +YAF + +
Sbjct: 209 LLSKDWSVRISHVYREANRLADGLANYAFFLPL 241


>ref|XP_006468253.1| PREDICTED: uncharacterized protein LOC102614777 [Citrus sinensis]
          Length = 320

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 44/118 (37%), Positives = 64/118 (54%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CSV S ELWG+  GL +AW + F +V +E+DS   + L+    P  +    L+++IQ 
Sbjct: 197 GVCSVTSTELWGLFHGLSIAWQYGFRRVYVEVDSMCVMRLISNPNPPINEHFTLIQEIQA 256

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISIYNFLCS*RTHSCILSLLFK*CYGVA 3
              +DW  +   + REA  VA+FL SY FS S+    C       +LS+L    +GVA
Sbjct: 257 LLRRDWLTKVEHIYREANEVADFLASYNFSFSL-GLHCFQFNPPNMLSILTNDVHGVA 313


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 39/93 (41%), Positives = 55/93 (59%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELWGV  GL +AW     +V LE+DS++ VG L   +   HP+  L++    
Sbjct: 198 GVCSAPLAELWGVYYGLFIAWGRGARRVELEVDSKMVVGFLTTGIADSHPLSFLLRLCYD 257

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
           F  K W ++   V REA  +A+ L +YAFS+S+
Sbjct: 258 FLSKGWIVRISHVYREANRLADGLANYAFSLSL 290


>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 768

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CSV SAELWG+  GL +AW H + +V +E+DS+  + L+  S P  +    L+  IQ 
Sbjct: 645 GFCSVTSAELWGLFHGLSIAWLHGYRRVIVEVDSRCILQLVSNSNPTINEHLSLITAIQE 704

Query: 176 FFCKDWRIQFRDVVREAKYVANFL--FSYAFSISIYNF 69
              +DW IQ   + REA   ++FL  +S AF + ++ F
Sbjct: 705 LIGRDWLIQMNHIYREANAASDFLATYSLAFPVGLHYF 742


>gb|AAD14501.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 158

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 38/91 (41%), Positives = 53/91 (58%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G C+ P AELWGV  GL +AW+    ++ LE+DS+L  G L   +   H +  LV+   G
Sbjct: 35  GRCTAPLAELWGVYYGLVIAWEKGITRLELEVDSKLVAGFLTTGIEDSHLLSFLVRLCYG 94

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSI 84
           F  KDW ++   V REA   A+ L +YAFS+
Sbjct: 95  FSSKDWIVRVSHVYREANRFADELANYAFSL 125


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 37/93 (39%), Positives = 55/93 (59%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G CS P AELW V  GL +AW+    ++ +E+DS+L VG L   +   HP+  LV+   G
Sbjct: 671 GICSAPLAELWRVYYGLYIAWERKITRLEVEVDSELVVGFLTTWISDSHPLSFLVRLCYG 730

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSISI 78
           F  +DW ++   V REA  +A+ L +YA S+ +
Sbjct: 731 FISRDWIVRISHVYREANRLADGLANYASSLPL 763


>gb|ABK28138.1| unknown [Arabidopsis thaliana]
          Length = 163

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 38/91 (41%), Positives = 53/91 (58%)
 Frame = -1

Query: 356 GACSVPSAELWGVLQGLKLAWDHNFIKVCLEIDSQLAVGLLKKSLPLFHPICGLVKKIQG 177
           G C+ P AELWGV  GL +AW+    ++ LE+DS+L  G L   +   H +  LV+   G
Sbjct: 39  GRCTAPLAELWGVYYGLVIAWEKGITRLELEVDSKLVAGFLTTGIEDSHLLSFLVRLCYG 98

Query: 176 FFCKDWRIQFRDVVREAKYVANFLFSYAFSI 84
           F  KDW ++   V REA   A+ L +YAFS+
Sbjct: 99  FSSKDWIVRVSHVYREANRFADELANYAFSL 129