BLASTX nr result
ID: Rheum21_contig00035171
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00035171
(527 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 88 6e-28
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 90 1e-27
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 89 4e-27
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 88 2e-26
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 86 9e-26
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 82 1e-25
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 82 2e-25
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 82 3e-25
ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668... 91 3e-25
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 80 6e-25
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 78 3e-24
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 85 6e-24
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 86 5e-23
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 77 1e-22
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 77 1e-22
gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana] 77 3e-22
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 76 4e-22
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 76 6e-22
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 76 6e-22
ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261... 80 7e-22
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 87.8 bits (216), Expect(2) = 6e-28
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
EE++ LF++ + K+PG DGY S FFK TW + G D I A Q+FF + +N T++
Sbjct: 753 EEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILA 812
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK ++ +KD+RPISCCN+ Y
Sbjct: 813 LIPKKDEAIEMKDYRPISCCNVLY 836
Score = 62.0 bits (149), Expect(2) = 6e-28
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
KIL +RLK++LP I NQ FV R + N+L+ ++VK Y V+PRC +K+D KA
Sbjct: 841 KILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKA 900
Query: 445 F 447
F
Sbjct: 901 F 901
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 89.7 bits (221), Expect(2) = 1e-27
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
EE+R LF + S K+PG DGY S FFK TW I+G++ A Q+FF + IN T++
Sbjct: 456 EEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILA 515
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK + + +KD+RPISCCN+ Y
Sbjct: 516 LIPKKTEAREMKDYRPISCCNVLY 539
Score = 58.9 bits (141), Expect(2) = 1e-27
Identities = 32/78 (41%), Positives = 46/78 (58%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
KI+ +RLK++LP I+ NQ FV R + N+L+ ++VK Y +S RC IK+D KA
Sbjct: 544 KIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKA 603
Query: 445 FY*VVLYQPHPFHFFTLL 498
F V P + FT+L
Sbjct: 604 FDSV--QWPFLINVFTIL 619
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 88.6 bits (218), Expect(2) = 4e-27
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
EE++ LFS+ + K+PG DG+ S FFKE+W ILG + I A Q+FF + +N T++
Sbjct: 9 EEIKKVLFSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILA 68
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK S +KD+RPISCCN+ Y
Sbjct: 69 LIPKKLESKEMKDYRPISCCNVMY 92
Score = 58.5 bits (140), Expect(2) = 4e-27
Identities = 28/60 (46%), Positives = 38/60 (63%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
KIL +RLK++LP I+ NQ FV R + N+L+ D+VK Y +S RC IK+D KA
Sbjct: 97 KILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSISERCAIKIDISKA 156
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 88.2 bits (217), Expect(2) = 2e-26
Identities = 37/84 (44%), Positives = 56/84 (66%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
EE++ +FS+ K+PG DGY S F+K +W I+G+++I A Q+FF + +N T++
Sbjct: 177 EEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILA 236
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK + IKD+RPISCCN+ Y
Sbjct: 237 LIPKKKEAREIKDYRPISCCNVLY 260
Score = 56.2 bits (134), Expect(2) = 2e-26
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
KIL +RLK ILP I NQ FV R + N+L+ ++VK Y +S RC +K+D KA
Sbjct: 265 KILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKA 324
Query: 445 F 447
F
Sbjct: 325 F 325
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 85.5 bits (210), Expect(2) = 9e-26
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
+E+R ALFS+ + K+PG DGY S F+K W I+G + + A ++FF + +N T++
Sbjct: 871 KEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILA 930
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK + +KD+RPISCCN+ Y
Sbjct: 931 LIPKKLEAKEMKDYRPISCCNVIY 954
Score = 57.0 bits (136), Expect(2) = 9e-26
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
KI+ +RLK +LP+ I+ NQ FV R + N+L+ ++VK Y +S RC IK+D KA
Sbjct: 959 KIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISGRCAIKIDISKA 1018
Query: 445 F 447
F
Sbjct: 1019 F 1019
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 82.0 bits (201), Expect(2) = 1e-25
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
EE++ LFS+ K+PG DGY S F+K TW I+G + Q+FF + IN ++
Sbjct: 103 EEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILA 162
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK ++ ++D+RPISCCN+ Y
Sbjct: 163 LIPKKLAAKEMRDYRPISCCNVLY 186
Score = 60.1 bits (144), Expect(2) = 1e-25
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
KI+ +RLK++LP I++NQ FV R + N+L+ ++VK Y +S RC IK+D KA
Sbjct: 191 KIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKA 250
Query: 445 F 447
F
Sbjct: 251 F 251
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 82.0 bits (201), Expect(2) = 2e-25
Identities = 38/84 (45%), Positives = 52/84 (61%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
EE + LF++ S K PG DGY S FFK TW I G D I A ++FF + +N T++
Sbjct: 29 EENQKVLFAMPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILA 88
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK + ++D+RPISCCN+ Y
Sbjct: 89 LIPKKDEATLMRDYRPISCCNVIY 112
Score = 59.7 bits (143), Expect(2) = 2e-25
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
KI+ +RLK++LP I NQ FV R + N+L+ ++VK Y +SPRC +K+D KA
Sbjct: 117 KIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKA 176
Query: 445 F 447
F
Sbjct: 177 F 177
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 82.4 bits (202), Expect(2) = 3e-25
Identities = 36/84 (42%), Positives = 53/84 (63%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
EE+ +FS+ + K+PG DGY + F+K W I+G + I A Q+FF + IN T++
Sbjct: 344 EEIHKVVFSMPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILA 403
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK + +KD+RPISCCN+ Y
Sbjct: 404 LIPKKKEAKEMKDYRPISCCNVLY 427
Score = 58.5 bits (140), Expect(2) = 3e-25
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
KI+ +RLK++LP I NQ FV R + N+L+ ++VK Y VS RC +K+D KA
Sbjct: 432 KIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKA 491
Query: 445 F 447
F
Sbjct: 492 F 492
>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
Length = 603
Score = 90.5 bits (223), Expect(2) = 3e-25
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
+EV N + +D+ K PG DG+N LFFK+ W I+G+DI +A FF + + L+ +NH +I
Sbjct: 264 QEVWNVISVMDNNKAPGPDGFNVLFFKKAWNIIGDDIFEAVNEFFTTGKILKQLNHAIIA 323
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK + + FRPISCCN+ Y
Sbjct: 324 LIPKHDQASQVNHFRPISCCNLLY 347
Score = 50.4 bits (119), Expect(2) = 3e-25
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
KIL +R+ +L II + Q F+ ++ + NI + Q++++ Y SPRC +K+D KA
Sbjct: 352 KILANRIAPVLETIIGETQTAFIKNKKMMDNIFLIQEILRKYAWKRSSPRCLLKIDLHKA 411
Query: 445 F 447
+
Sbjct: 412 Y 412
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 1412
Score = 80.1 bits (196), Expect(2) = 6e-25
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +2
Query: 5 EVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIYL 184
EV FSI K+PG DGY FF+ETW ++G ++ A ++FF + +N T++ L
Sbjct: 723 EVMKVFFSIPLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILAL 782
Query: 185 APKSSSSLHIKDFRPISCCNITY 253
PK + + +KD+RPISCCN+ Y
Sbjct: 783 IPKRTYAKEMKDYRPISCCNVLY 805
Score = 59.7 bits (143), Expect(2) = 6e-25
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
K+L +RLK +LP I+ NQ F+ R + N+L+ ++VK Y +SPRC +K+D KA
Sbjct: 810 KLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKA 869
Query: 445 F 447
F
Sbjct: 870 F 870
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 78.2 bits (191), Expect(2) = 3e-24
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
+E+ AL ID K PG DG+NS+FFK++W ++ +I + +FF + + IN T +
Sbjct: 444 QEIDQALADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVT 503
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK + H KD+RPI+CC+ Y
Sbjct: 504 LIPKIDEAKHAKDYRPIACCSTLY 527
Score = 59.3 bits (142), Expect(2) = 3e-24
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
KIL RL+ ++ ++ Q F+P R I NIL+ ++++ Y HVSPRC IKVD RKA
Sbjct: 532 KILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKA 591
Query: 445 F 447
+
Sbjct: 592 Y 592
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 84.7 bits (208), Expect(2) = 6e-24
Identities = 36/84 (42%), Positives = 53/84 (63%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
++V N + + + K PG DG+N LFFK+ W I+G+DI A FF + + L+ +NH +I
Sbjct: 812 QKVWNIISVMANNKAPGPDGFNVLFFKKAWNIVGDDIFAAVNEFFTTGKILKQLNHAIIV 871
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK + + FRPISCCN+ Y
Sbjct: 872 LIPKHDQASQVNHFRPISCCNLLY 895
Score = 51.6 bits (122), Expect(2) = 6e-24
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
KIL +R+ +L II + Q F+ +R + NI + Q++++ Y SPRC +K+D KA
Sbjct: 900 KILANRIAPVLETIIGETQTAFIKNRKMMDNIFLVQEILRKYARKRPSPRCLLKIDLHKA 959
Query: 445 F 447
+
Sbjct: 960 Y 960
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 85.5 bits (210), Expect(2) = 5e-23
Identities = 38/83 (45%), Positives = 53/83 (63%)
Frame = +2
Query: 5 EVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIYL 184
++++ F++ S K+PG DGY S FFK+TW I+G +I A Q FF S R L N T + +
Sbjct: 450 DIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTM 509
Query: 185 APKSSSSLHIKDFRPISCCNITY 253
PK ++ I +FRPISCCN Y
Sbjct: 510 VPKKPNADRITEFRPISCCNAIY 532
Score = 47.8 bits (112), Expect(2) = 5e-23
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
K+L RL+ ILP IS +Q FV R + N+L+ ++V+ + ++S R +KVD RKA
Sbjct: 537 KLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKA 596
Query: 445 F 447
F
Sbjct: 597 F 597
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 77.0 bits (188), Expect(2) = 1e-22
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
+E++ A S+ KT G DGY+ FF++TW I+G +++ A FF S + L+ N T +
Sbjct: 310 DEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLV 369
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK+S++ I +FRPISC N Y
Sbjct: 370 LIPKTSNACTISEFRPISCLNTLY 393
Score = 55.1 bits (131), Expect(2) = 1e-22
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
K+L RL+ +L +I +Q F+P RS+ N+L+ ++V Y L++SPR +KVD +KA
Sbjct: 398 KLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKA 457
Query: 445 F 447
F
Sbjct: 458 F 458
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 77.0 bits (188), Expect(2) = 1e-22
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
+E++ A S+ KT G DGY+ FF++TW I+G +++ A FF S + L+ N T +
Sbjct: 310 DEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLV 369
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK+S++ I +FRPISC N Y
Sbjct: 370 LIPKTSNACTISEFRPISCLNTLY 393
Score = 55.1 bits (131), Expect(2) = 1e-22
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
K+L RL+ +L +I +Q F+P RS+ N+L+ ++V Y L++SPR +KVD +KA
Sbjct: 398 KLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKA 457
Query: 445 F 447
F
Sbjct: 458 F 458
>gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana]
Length = 458
Score = 77.0 bits (188), Expect(2) = 3e-22
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
EE++ LF++ K+ G D Y F+K TW I+G + I A ++FF + IN T++
Sbjct: 197 EEIKRVLFAMPKDKSLGPDSYTMEFYKSTWDIIGKEFILAIKSFFVKGFLPKAINSTILA 256
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK +++ +KD+RPISCCN+ +
Sbjct: 257 LIPKKATTNEMKDYRPISCCNVIF 280
Score = 53.5 bits (127), Expect(2) = 3e-22
Identities = 26/62 (41%), Positives = 37/62 (59%)
Frame = +1
Query: 262 LKILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRK 441
LKI+ + LK +LP+ + NQ FV R + N+L+ ++VK Y VS C IK+D K
Sbjct: 284 LKIIANPLKRVLPNFVVGNQSAFVQDRLLIENVLLATELVKDYHKESVSTGCAIKIDISK 343
Query: 442 AF 447
AF
Sbjct: 344 AF 345
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 75.9 bits (185), Expect(2) = 4e-22
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
E+++NA FS+ K G DG++ FF WPI+G ++ +A FF S + L+ N T +
Sbjct: 347 EQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLV 406
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK +++ + DFRPISC N Y
Sbjct: 407 LIPKITNASSMSDFRPISCLNTVY 430
Score = 54.3 bits (129), Expect(2) = 4e-22
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
K+L DRLK LP IS +Q F+P R N+L+ ++V Y +++P +KVD RKA
Sbjct: 435 KLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKA 494
Query: 445 F 447
F
Sbjct: 495 F 495
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 76.3 bits (186), Expect(2) = 6e-22
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +2
Query: 5 EVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIYL 184
+++ A FS+ K G DGY+S FFK W ++G ++ +A Q FF S + L+ N T + L
Sbjct: 452 DIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVL 511
Query: 185 APKSSSSLHIKDFRPISCCNITY 253
PK ++S + DFRPISC N Y
Sbjct: 512 IPKITNSSKMTDFRPISCLNTLY 534
Score = 53.5 bits (127), Expect(2) = 6e-22
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
K+L RLK +L +IS +Q F+P R + N+L+ ++V Y ++S R +KVD RKA
Sbjct: 539 KLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKA 598
Query: 445 F 447
F
Sbjct: 599 F 599
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 76.3 bits (186), Expect(2) = 6e-22
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +2
Query: 5 EVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIYL 184
+++ A FS+ K G DGY+S FFK W ++G ++ +A Q FF S + L+ N T + L
Sbjct: 452 DIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVL 511
Query: 185 APKSSSSLHIKDFRPISCCNITY 253
PK ++S + DFRPISC N Y
Sbjct: 512 IPKITNSSKMTDFRPISCLNTLY 534
Score = 53.5 bits (127), Expect(2) = 6e-22
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
K+L RLK +L +IS +Q F+P R + N+L+ ++V Y ++S R +KVD RKA
Sbjct: 539 KLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKA 598
Query: 445 F 447
F
Sbjct: 599 F 599
>ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261795 [Solanum
lycopersicum]
Length = 413
Score = 80.1 bits (196), Expect(2) = 7e-22
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +2
Query: 2 EEVRNALFSIDSIKTPGSDGYNSLFFKETWPILGNDIIKATQNFFHSSRTLRYINHTVIY 181
+E+ + L S + K PG DGYN+LFFK TW I+ D+I+A +NFF + + + N T++
Sbjct: 242 QEIYSTLQSYGNDKAPGIDGYNALFFKHTWKIIKKDVIEAVKNFFTTGKLFKPFNCTLVS 301
Query: 182 LAPKSSSSLHIKDFRPISCCNITY 253
L PK +K++ PI+CC + Y
Sbjct: 302 LIPKVQCPKTVKEYTPIACCTVLY 325
Score = 49.3 bits (116), Expect(2) = 7e-22
Identities = 20/61 (32%), Positives = 38/61 (62%)
Frame = +1
Query: 265 KILVDRLKIILPHIISDNQGVFVPHRSIQHNILICQDVVKHYEMLHVSPRCNIKVDFRKA 444
K++ R+ ++ +I ++Q F+P R I NI++ ++VK Y ++SPR +K+D KA
Sbjct: 330 KVITRRMHDVIHDVICESQAGFIPGRKIADNIILAHELVKTYTRKNISPRIILKIDLHKA 389
Query: 445 F 447
+
Sbjct: 390 Y 390