BLASTX nr result
ID: Rheum21_contig00035149
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00035149
(292 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [A... 110 2e-22
gb|EMJ09572.1| hypothetical protein PRUPE_ppa000881mg [Prunus pe... 104 1e-20
gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo] 100 2e-19
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co... 100 3e-19
gb|EXB39214.1| 5'-3' exoribonuclease 4 [Morus notabilis] 99 6e-19
ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fra... 99 8e-19
gb|EPS72691.1| hypothetical protein M569_02065, partial [Genlise... 98 1e-18
gb|ESW16799.1| hypothetical protein PHAVU_007G185300g [Phaseolus... 97 2e-18
ref|XP_006606481.1| PREDICTED: 5'-3' exoribonuclease 4-like isof... 96 7e-18
ref|XP_006606479.1| PREDICTED: 5'-3' exoribonuclease 4-like isof... 96 7e-18
ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populu... 96 7e-18
ref|XP_006606480.1| PREDICTED: 5'-3' exoribonuclease 4-like isof... 96 7e-18
ref|XP_002328516.1| predicted protein [Populus trichocarpa] 96 7e-18
ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, par... 95 9e-18
ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cuc... 95 9e-18
ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana] ... 94 2e-17
gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidops... 94 2e-17
ref|XP_006433057.1| hypothetical protein CICLE_v10000168mg [Citr... 92 6e-17
ref|XP_006301240.1| hypothetical protein CARUB_v10021640mg [Caps... 92 6e-17
ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit... 91 1e-16
>ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [Amborella trichopoda]
gi|548830590|gb|ERM93513.1| hypothetical protein
AMTR_s00004p00046450 [Amborella trichopoda]
Length = 936
Score = 110 bits (276), Expect = 2e-22
Identities = 49/57 (85%), Positives = 54/57 (94%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPLCI++VIEEEP EGDNGVLL +DVS+PNPN TEFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLCIVDVIEEEPVEGDNGVLLPVDVSKPNPNNTEFDNLYLDMN 57
>gb|EMJ09572.1| hypothetical protein PRUPE_ppa000881mg [Prunus persica]
Length = 972
Score = 104 bits (259), Expect = 1e-20
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPL I++V+EE+PREG NGV L IDVSRPNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEQPREGPNGVPLPIDVSRPNPNGYEFDNLYLDMN 57
>gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
Length = 934
Score = 100 bits (249), Expect = 2e-19
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYP I +V+EEEP +G NGVLL IDVS+PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPLDGPNGVLLPIDVSKPNPNGMEFDNLYLDMN 57
>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 964
Score = 100 bits (248), Expect = 3e-19
Identities = 43/57 (75%), Positives = 51/57 (89%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPL I++V+EEEP+E NGV+ ID+S+PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMN 57
>gb|EXB39214.1| 5'-3' exoribonuclease 4 [Morus notabilis]
Length = 957
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPL I +V+EEEP+E NG+ + IDVS+PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSISDVVEEEPKEDSNGIPMPIDVSKPNPNGLEFDNLYLDMN 57
>ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fragaria vesca subsp.
vesca]
Length = 971
Score = 98.6 bits (244), Expect = 8e-19
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPL I++V+EE PRE NGV IDVSRPNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEHPREDPNGVPRPIDVSRPNPNGFEFDNLYLDMN 57
>gb|EPS72691.1| hypothetical protein M569_02065, partial [Genlisea aurea]
Length = 955
Score = 98.2 bits (243), Expect = 1e-18
Identities = 42/57 (73%), Positives = 50/57 (87%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPLCI++V+EEEPR + G+ + ID+S PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLCIVDVVEEEPRRNEFGMEIPIDISGPNPNGIEFDNLYLDMN 57
>gb|ESW16799.1| hypothetical protein PHAVU_007G185300g [Phaseolus vulgaris]
Length = 932
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPLCI +VIE+EP GD+GV L ID S+PN NG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLCIADVIEDEPAVGDDGVPLPIDASKPNLNGMEFDNLYLDMN 57
>ref|XP_006606481.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X3 [Glycine max]
Length = 907
Score = 95.5 bits (236), Expect = 7e-18
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPL I +V+EE+P GD+GV ID S+PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMN 57
>ref|XP_006606479.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X1 [Glycine max]
Length = 932
Score = 95.5 bits (236), Expect = 7e-18
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPL I +V+EE+P GD+GV ID S+PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMN 57
>ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populus trichocarpa]
gi|550338119|gb|ERP60549.1| 5'-3' exoribonuclease family
protein [Populus trichocarpa]
Length = 948
Score = 95.5 bits (236), Expect = 7e-18
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPL I++VIEEEP+E NG IDVS+PNPNG E+DNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMN 57
>ref|XP_006606480.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X2 [Glycine max]
Length = 931
Score = 95.5 bits (236), Expect = 7e-18
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPL I +V+EE+P GD+GV ID S+PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMN 57
>ref|XP_002328516.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 95.5 bits (236), Expect = 7e-18
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPL I++VIEEEP+E NG IDVS+PNPNG E+DNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMN 57
>ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 254
Score = 95.1 bits (235), Expect = 9e-18
Identities = 43/57 (75%), Positives = 48/57 (84%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYP I +V+EEEP G +GVL IDVS+PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMN 57
>ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 95.1 bits (235), Expect = 9e-18
Identities = 43/57 (75%), Positives = 48/57 (84%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYP I +V+EEEP G +GVL IDVS+PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMN 57
>ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3'
exoribonuclease 4; AltName: Full=Protein ACC INSENSITIVE
1; AltName: Full=Protein ETHYLENE INSENSITIVE 5;
AltName: Full=Protein EXORIBONUCLEASE 4
gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis
thaliana] gi|17381112|gb|AAL36368.1| putative
exonuclease [Arabidopsis thaliana]
gi|20259665|gb|AAM14350.1| putative exonuclease
[Arabidopsis thaliana] gi|109627646|gb|ABG34298.1|
At1g54490 [Arabidopsis thaliana]
gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4
[Arabidopsis thaliana]
Length = 947
Score = 93.6 bits (231), Expect = 2e-17
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYP I +V+EEEP +G G L+ +D++RPNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMN 57
>gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
Length = 965
Score = 93.6 bits (231), Expect = 2e-17
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYP I +V+EEEP +G G L+ +D++RPNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMN 57
>ref|XP_006433057.1| hypothetical protein CICLE_v10000168mg [Citrus clementina]
gi|568835355|ref|XP_006471738.1| PREDICTED: 5'-3'
exoribonuclease 4-like [Citrus sinensis]
gi|557535179|gb|ESR46297.1| hypothetical protein
CICLE_v10000168mg [Citrus clementina]
Length = 959
Score = 92.4 bits (228), Expect = 6e-17
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPL I++V+EE+P+ GV +DVS+PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMN 57
>ref|XP_006301240.1| hypothetical protein CARUB_v10021640mg [Capsella rubella]
gi|482569950|gb|EOA34138.1| hypothetical protein
CARUB_v10021640mg [Capsella rubella]
Length = 948
Score = 92.4 bits (228), Expect = 6e-17
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYP I +V+EEEP +G G L+ +D+++PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITKPNPNGFEFDNLYLDMN 57
>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 950
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/57 (73%), Positives = 47/57 (82%)
Frame = +1
Query: 121 MGVPAFYKWLADRYPLCILNVIEEEPREGDNGVLLTIDVSRPNPNGTEFDNLYLDMN 291
MGVPAFY+WLADRYPL +++V+EEEP EG IDVSRPNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEPSEGG----AEIDVSRPNPNGMEFDNLYLDMN 53