BLASTX nr result

ID: Rheum21_contig00035136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00035136
         (440 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY29570.1| Reticulon family protein, putative isoform 1 [The...    83   4e-14
ref|XP_002533975.1| hypothetical protein RCOM_0370390 [Ricinus c...    78   1e-12
ref|XP_006279606.1| hypothetical protein CARUB_v10026138mg [Caps...    78   1e-12
ref|XP_006401142.1| hypothetical protein EUTSA_v10013006mg [Eutr...    77   2e-12
ref|XP_006424682.1| hypothetical protein CICLE_v10028046mg [Citr...    77   2e-12
ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [...    77   2e-12
ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [...    77   2e-12
ref|XP_006488206.1| PREDICTED: reticulon-like protein B21-like [...    77   3e-12
gb|EXC26162.1| Reticulon-like protein [Morus notabilis]                76   5e-12
ref|XP_002309341.2| hypothetical protein POPTR_0006s19970g [Popu...    75   1e-11
ref|XP_002324545.2| hypothetical protein POPTR_0018s11750g [Popu...    74   2e-11
gb|ACJ86231.1| unknown [Medicago truncatula]                           72   1e-10
dbj|BAD93974.1| putative protein [Arabidopsis thaliana]                72   1e-10
ref|XP_004514755.1| PREDICTED: reticulon-like protein B21-like [...    71   1e-10
dbj|BAB08870.1| unnamed protein product [Arabidopsis thaliana]         71   2e-10
gb|ESW10408.1| hypothetical protein PHAVU_009G206800g [Phaseolus...    71   2e-10
ref|NP_200608.3| reticulon-like protein B21 [Arabidopsis thalian...    71   2e-10
ref|XP_003525913.2| PREDICTED: reticulon-like protein B21-like [...    70   2e-10
ref|XP_006343731.1| PREDICTED: reticulon-like protein B21-like [...    70   2e-10
ref|XP_006857216.1| hypothetical protein AMTR_s00065p00202980 [A...    70   2e-10

>gb|EOY29570.1| Reticulon family protein, putative isoform 1 [Theobroma cacao]
          Length = 716

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 44/69 (63%), Positives = 48/69 (69%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDGAEKRRT 182
           +HKK VA AIFT+VWNLSSIVARIWAAFMLFVALRYYQQ   I  DD + DE G   + T
Sbjct: 633 THKKAVAVAIFTLVWNLSSIVARIWAAFMLFVALRYYQQKMVI--DDWVEDEAGPGSKET 690

Query: 183 LNDNRPLQR 209
                  QR
Sbjct: 691 FQGPTGTQR 699


>ref|XP_002533975.1| hypothetical protein RCOM_0370390 [Ricinus communis]
           gi|223526038|gb|EEF28406.1| hypothetical protein
           RCOM_0370390 [Ricinus communis]
          Length = 604

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIW--DEDGAEKR 176
           SHKK VA AIFT+VWNLSS+VAR+WA FM++VA+RYYQQS  +  DDE W  ++D A   
Sbjct: 520 SHKKAVALAIFTLVWNLSSMVARVWAVFMMYVAVRYYQQSMEL-VDDEDWVVEDDDAGDD 578

Query: 177 RTL 185
            TL
Sbjct: 579 ETL 581


>ref|XP_006279606.1| hypothetical protein CARUB_v10026138mg [Capsella rubella]
           gi|482548310|gb|EOA12504.1| hypothetical protein
           CARUB_v10026138mg [Capsella rubella]
          Length = 586

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKAD--DEIWDEDGAEKR 176
           +HKK VA A+FT+VWNLSS+ AR+WAAFMLFVALRYYQQ    K D  ++  D++  E+ 
Sbjct: 497 NHKKAVALALFTLVWNLSSVTARVWAAFMLFVALRYYQQKMIWKTDQNEDTDDDENIEED 556

Query: 177 RTLNDNRPLQRPQ 215
               + + +Q P+
Sbjct: 557 EEEEEEKEVQVPK 569


>ref|XP_006401142.1| hypothetical protein EUTSA_v10013006mg [Eutrema salsugineum]
           gi|557102232|gb|ESQ42595.1| hypothetical protein
           EUTSA_v10013006mg [Eutrema salsugineum]
          Length = 608

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 7/78 (8%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQS---STIKADDE----IWDED 161
           +HKK VA A+FT+VWNLSS+VAR+WAAFMLFVALRYYQQ+   +T + DD+    + D+D
Sbjct: 516 THKKAVALALFTLVWNLSSVVARVWAAFMLFVALRYYQQNMIWTTDQDDDDEEHVVEDDD 575

Query: 162 GAEKRRTLNDNRPLQRPQ 215
             E+       + +++P+
Sbjct: 576 EEEEEEEEEVKQQVRKPK 593


>ref|XP_006424682.1| hypothetical protein CICLE_v10028046mg [Citrus clementina]
           gi|557526616|gb|ESR37922.1| hypothetical protein
           CICLE_v10028046mg [Citrus clementina]
          Length = 607

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/63 (60%), Positives = 45/63 (71%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDGAEKRRT 182
           SHKK VA  IFT+VWNLSS++ARIWAAFMLFVALRYYQQS       E+ D+D      T
Sbjct: 509 SHKKAVAVGIFTLVWNLSSMIARIWAAFMLFVALRYYQQSMIRDDWVEVEDDDAKGSEET 568

Query: 183 LND 191
            ++
Sbjct: 569 WHE 571


>ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus]
          Length = 555

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDG 164
           SHKK VA AIF +VWNLSS+VAR+WAAFMLFVA RYYQQS       E WD DG
Sbjct: 465 SHKKGVALAIFVLVWNLSSVVARVWAAFMLFVAFRYYQQS----IQTEEWDGDG 514


>ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus]
          Length = 555

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDG 164
           SHKK VA AIF +VWNLSS+VAR+WAAFMLFVA RYYQQS       E WD DG
Sbjct: 465 SHKKGVALAIFVLVWNLSSVVARVWAAFMLFVAFRYYQQS----IQTEEWDGDG 514


>ref|XP_006488206.1| PREDICTED: reticulon-like protein B21-like [Citrus sinensis]
          Length = 606

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/63 (60%), Positives = 45/63 (71%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDGAEKRRT 182
           SHKK VA  IFT+VWNLSS++ARIWAAFMLFVALRYYQQS       E+ D+D      T
Sbjct: 508 SHKKAVAVGIFTLVWNLSSMIARIWAAFMLFVALRYYQQSMIRDDWVEVEDDDANGSEET 567

Query: 183 LND 191
            ++
Sbjct: 568 WHE 570


>gb|EXC26162.1| Reticulon-like protein [Morus notabilis]
          Length = 702

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 46/97 (47%), Positives = 55/97 (56%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDGAEKRRT 182
           SHKK V  A+F +VWNLSSIVARIWA FML+VA RYYQQ  T+  DD  W ED AE   T
Sbjct: 469 SHKKAVTVAVFLLVWNLSSIVARIWAVFMLYVAFRYYQQ--TLVRDD--WVEDDAEGEET 524

Query: 183 LNDNRPLQRPQVISKLRQGRHSTTSQSGTHVDIKGTK 293
            +        + I   RQG  S    + T    + +K
Sbjct: 525 WH--------EPIGGQRQGHGSIVVDNNTKQKKRSSK 553


>ref|XP_002309341.2| hypothetical protein POPTR_0006s19970g [Populus trichocarpa]
           gi|550336688|gb|EEE92864.2| hypothetical protein
           POPTR_0006s19970g [Populus trichocarpa]
          Length = 722

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/69 (57%), Positives = 51/69 (73%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDGAEKRRT 182
           SHKK VA  IF++VWNLSS+VARIWA FM+FVA+RYYQQ  T++ DD + +ED AE   T
Sbjct: 640 SHKKAVALGIFSLVWNLSSMVARIWAVFMMFVAVRYYQQ--TMERDDWVEEED-AEADET 696

Query: 183 LNDNRPLQR 209
            + +   QR
Sbjct: 697 WHGDSGGQR 705


>ref|XP_002324545.2| hypothetical protein POPTR_0018s11750g [Populus trichocarpa]
           gi|550318535|gb|EEF03110.2| hypothetical protein
           POPTR_0018s11750g [Populus trichocarpa]
          Length = 711

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/53 (66%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDED 161
           SHKK VA  IFT+VWNLSS+VARIWA FM+FVA+RYYQQ  T++ DD + +E+
Sbjct: 627 SHKKAVALCIFTLVWNLSSMVARIWAVFMMFVAVRYYQQ--TMERDDWVVEEE 677


>gb|ACJ86231.1| unknown [Medicago truncatula]
          Length = 169

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDGAEKRRT 182
           +HKK VA  IF +VWNLSS+VARIWA F+LFVA RYYQQ   ++ D+ + DE G ++   
Sbjct: 90  THKKAVALGIFGLVWNLSSVVARIWAVFVLFVAFRYYQQHYMVR-DEWVEDEAGCDEAWE 148

Query: 183 LNDNRPLQRPQV-ISKLRQG 239
               R  QR  V  +K+++G
Sbjct: 149 EEPVRQKQRNFVATNKIKKG 168


>dbj|BAD93974.1| putative protein [Arabidopsis thaliana]
          Length = 487

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQS---STIKADDEIWDEDGAEK 173
           +HKK VA A+FT+VWNLSS+ AR+WAAFML VA RYYQ     +T +ADD+  D++G E+
Sbjct: 400 NHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYYQHKMIWTTDQADDD-EDDNGEEE 458

Query: 174 RRTLNDNRP 200
                +  P
Sbjct: 459 AEEEKEQVP 467


>ref|XP_004514755.1| PREDICTED: reticulon-like protein B21-like [Cicer arietinum]
          Length = 567

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 8/66 (12%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKAD--------DEIWDE 158
           +HKK VA  IF +VWNLSS+VARIWA F+LFVA RYYQQ   ++ +        DE W+E
Sbjct: 489 THKKAVALGIFGLVWNLSSVVARIWAVFVLFVAFRYYQQHYMVREEWVEDETGYDETWEE 548

Query: 159 DGAEKR 176
              +K+
Sbjct: 549 PVRQKQ 554


>dbj|BAB08870.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1065

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/57 (57%), Positives = 39/57 (68%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDGAEK 173
           +HKK VA A+FT+VWNLSS+ AR+WAAFML VA RYYQ       D    DED  E+
Sbjct: 502 NHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYYQHKMIWTTDQADDDEDDNEE 558


>gb|ESW10408.1| hypothetical protein PHAVU_009G206800g [Phaseolus vulgaris]
          Length = 668

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 8/60 (13%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKAD--------DEIWDE 158
           SHKK VA  IF +VWNLSS+VARIWA F+LFVA RYYQQ   ++ +        DE W+E
Sbjct: 585 SHKKAVALGIFGLVWNLSSVVARIWAVFVLFVAFRYYQQHYLVRDEWGEEEGGCDETWEE 644


>ref|NP_200608.3| reticulon-like protein B21 [Arabidopsis thaliana]
           gi|332278149|sp|Q56X72.2|RTNLS_ARATH RecName:
           Full=Reticulon-like protein B21; Short=AtRTNLB21
           gi|332009600|gb|AED96983.1| reticulon-like protein B21
           [Arabidopsis thaliana]
          Length = 487

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/57 (57%), Positives = 39/57 (68%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDGAEK 173
           +HKK VA A+FT+VWNLSS+ AR+WAAFML VA RYYQ       D    DED  E+
Sbjct: 400 NHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYYQHKMIWTTDQADDDEDDNEE 456


>ref|XP_003525913.2| PREDICTED: reticulon-like protein B21-like [Glycine max]
          Length = 664

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/73 (52%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDGAEKRRT 182
           +HKK VA  IF +VWNLSS+VARIWA F+LF A RYYQQ   ++ +   W ED A    T
Sbjct: 581 THKKAVALGIFGLVWNLSSVVARIWAVFVLFAAFRYYQQHYLVRDE---WGEDEAGCDET 637

Query: 183 LNDN---RPLQRP 212
             D    RP Q P
Sbjct: 638 WQDPVGVRPKQGP 650


>ref|XP_006343731.1| PREDICTED: reticulon-like protein B21-like [Solanum tuberosum]
          Length = 746

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 42/87 (48%), Positives = 55/87 (63%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQSSTIKADDEIWDEDGAEKRRT 182
           +HKK VAFAIFT++WNLSSI ARIWA FML+V  RYYQQ    K   E W     E+  T
Sbjct: 665 THKKAVAFAIFTLIWNLSSISARIWAVFMLYVGFRYYQQ----KMMKEGWI---GEEEIT 717

Query: 183 LNDNRPLQRPQVISKLRQGRHSTTSQS 263
           ++++   +R +     R GR ST+ +S
Sbjct: 718 ISEDYWQERQR-----RIGRKSTSMES 739


>ref|XP_006857216.1| hypothetical protein AMTR_s00065p00202980 [Amborella trichopoda]
           gi|548861299|gb|ERN18683.1| hypothetical protein
           AMTR_s00065p00202980 [Amborella trichopoda]
          Length = 596

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   SHKKVVAFAIFTIVWNLSSIVARIWAAFMLFVALRYYQQS-STIKADDEIWDEDGAEKRR 179
           SHKK VA A F ++WNLSS+VARIWAAF+L VA+RYYQQS  T+      WDE      R
Sbjct: 505 SHKKAVAIAAFMVIWNLSSVVARIWAAFILIVAVRYYQQSLITVN-----WDEVEVRVCR 559

Query: 180 TLNDNRPLQRPQVISKLRQ 236
            +   +P   P  IS +R+
Sbjct: 560 PIPSQKP--GPLKISPIRK 576


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