BLASTX nr result
ID: Rheum21_contig00035058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00035058
(414 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY23398.1| Tetratricopeptide repeat (TPR)-like superfamily p... 82 6e-14
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat... 79 6e-13
gb|EXB72481.1| hypothetical protein L484_011483 [Morus notabilis] 75 9e-12
gb|EXC37464.1| hypothetical protein L484_000761 [Morus notabilis] 75 1e-11
ref|XP_002513610.1| pentatricopeptide repeat-containing protein,... 75 1e-11
ref|XP_006382294.1| hypothetical protein POPTR_0005s00730g, part... 72 1e-10
ref|XP_002330010.1| predicted protein [Populus trichocarpa] 72 1e-10
emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera] 70 3e-10
ref|XP_006422093.1| hypothetical protein CICLE_v10006441mg [Citr... 68 1e-09
ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat... 68 1e-09
ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat... 68 1e-09
gb|EMJ20419.1| hypothetical protein PRUPE_ppa017678mg, partial [... 63 4e-08
ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat... 61 1e-07
ref|XP_006404171.1| hypothetical protein EUTSA_v10010175mg [Eutr... 59 5e-07
ref|XP_006366638.1| PREDICTED: putative pentatricopeptide repeat... 57 3e-06
>gb|EOY23398.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao] gi|508776143|gb|EOY23399.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 677
Score = 82.4 bits (202), Expect = 6e-14
Identities = 45/93 (48%), Positives = 57/93 (61%)
Frame = -1
Query: 279 PCYRHYSTVNQLELETIISRRLPGVKSAHKHNTIFLSEELCGEILDQYPDTKSLKKLHSK 100
PC RH+ST QL+ P + + L+E LCG +LDQYPD K+LKKLHS+
Sbjct: 7 PC-RHFSTAKQLK------DLAPSSPPKPEFPPLILNEHLCGNLLDQYPDVKTLKKLHSR 59
Query: 99 IVTDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
I DQ LR NPS+ IKL+RA+AA G RH+
Sbjct: 60 IFKDQYLRFNPSLRIKLMRAFAACGEPTVTRHI 92
>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 79.0 bits (193), Expect = 6e-13
Identities = 44/93 (47%), Positives = 55/93 (59%)
Frame = -1
Query: 279 PCYRHYSTVNQLELETIISRRLPGVKSAHKHNTIFLSEELCGEILDQYPDTKSLKKLHSK 100
P YRH+ V QL+ T++ L K + L+E LCG+ILD+ PD K LKKLHSK
Sbjct: 6 PLYRHFPAVKQLQ--TLV---LSIQKPKFTQQNVVLTENLCGQILDKNPDIKYLKKLHSK 60
Query: 99 IVTDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
I D L NPS+ IKL+RAYA G RH+
Sbjct: 61 ICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHI 93
>gb|EXB72481.1| hypothetical protein L484_011483 [Morus notabilis]
Length = 678
Score = 75.1 bits (183), Expect = 9e-12
Identities = 42/90 (46%), Positives = 59/90 (65%)
Frame = -1
Query: 270 RHYSTVNQLELETIISRRLPGVKSAHKHNTIFLSEELCGEILDQYPDTKSLKKLHSKIVT 91
RH+ +++E + S R P + S + LSEEL G+ILD YPD K+LKKLHSK++
Sbjct: 9 RHFKPWDKVEA-LVSSIRRPEITS----QSPALSEELVGKILDGYPDIKTLKKLHSKVIV 63
Query: 90 DQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
D+ L NPS++IKL+RA+AA G RH+
Sbjct: 64 DRHLHFNPSLSIKLMRAFAACGESRITRHI 93
>gb|EXC37464.1| hypothetical protein L484_000761 [Morus notabilis]
Length = 815
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/90 (46%), Positives = 59/90 (65%)
Frame = -1
Query: 270 RHYSTVNQLELETIISRRLPGVKSAHKHNTIFLSEELCGEILDQYPDTKSLKKLHSKIVT 91
RH+ +++E + S R P + S + LSEEL G+ILD YPD K+LKKLHSK++
Sbjct: 9 RHFKPWDKVEA-LVSSIRRPEITS----QSPALSEELVGKILDGYPDIKTLKKLHSKVIV 63
Query: 90 DQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
D+ L NPS++IKL+RA+AA G RH+
Sbjct: 64 DRHLHFNPSLSIKLMRAFAACGESRIPRHI 93
>ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547518|gb|EEF49013.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 660
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = -1
Query: 171 SEELCGEILDQYPDTKSLKKLHSKIVTDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
+E+LC ILDQYPD +LKKLH K++ DQ LR NPS+ IKL+R YAA G ARH+
Sbjct: 20 TEDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHI 76
>ref|XP_006382294.1| hypothetical protein POPTR_0005s00730g, partial [Populus
trichocarpa] gi|550337649|gb|ERP60091.1| hypothetical
protein POPTR_0005s00730g, partial [Populus trichocarpa]
Length = 670
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = -1
Query: 174 LSEELCGEILDQYPDTKSLKKLHSKIVTDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
L+E+LC +ILD PD K+LKKLHSKI+ DQ L NPS+ IKL+RAYAA G RH+
Sbjct: 30 LTEDLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHI 87
>ref|XP_002330010.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = -1
Query: 174 LSEELCGEILDQYPDTKSLKKLHSKIVTDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
L+E+LC +ILD PD K+LKKLHSKI+ DQ L NPS+ IKL+RAYAA G RH+
Sbjct: 36 LTEDLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHI 93
>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/81 (46%), Positives = 49/81 (60%)
Frame = -1
Query: 243 ELETIISRRLPGVKSAHKHNTIFLSEELCGEILDQYPDTKSLKKLHSKIVTDQRLRGNPS 64
+L+T++ L K + L+E LCG+ILD+ PD K LKKLHSKI D L NPS
Sbjct: 1005 QLQTLV---LSIQKPKFTQQXVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPS 1061
Query: 63 IAIKLIRAYAARGGVDCARHV 1
+ IKL+RAYA G RH+
Sbjct: 1062 LGIKLMRAYAVCGEPWSTRHI 1082
>ref|XP_006422093.1| hypothetical protein CICLE_v10006441mg [Citrus clementina]
gi|568874989|ref|XP_006490594.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g49142-like [Citrus sinensis]
gi|557523966|gb|ESR35333.1| hypothetical protein
CICLE_v10006441mg [Citrus clementina]
Length = 553
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = -1
Query: 174 LSEELCGEILDQYPDTKSLKKLHSKIVTDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
LS + C +ILD+YPD K+LKKLH++I+ +Q L NPSI +KL+R Y A G + RHV
Sbjct: 29 LSGDACNDILDKYPDIKTLKKLHAQIIINQHLHSNPSIGLKLMRTYGACGQMVDTRHV 86
>ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = -1
Query: 171 SEELCGEILDQYPDTKSLKKLHSKIVTDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
S+E C ILDQYP K+L KLHSKIV ++ LR +P++AIKL+RAY+A+G AR++
Sbjct: 37 SKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYI 93
>ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = -1
Query: 171 SEELCGEILDQYPDTKSLKKLHSKIVTDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
S+E C ILDQYP K+L KLHSKIV ++ LR +P++AIKL+RAY+A+G AR++
Sbjct: 37 SKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYI 93
>gb|EMJ20419.1| hypothetical protein PRUPE_ppa017678mg, partial [Prunus persica]
Length = 640
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = -1
Query: 165 ELCGEILDQYPDTKSLKKLHSKIVTDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
++ G+ILDQ PD ++LK+LHS IV DQRLR + S+ IKL+RAYAA G RH+
Sbjct: 1 QVFGKILDQDPDIRTLKELHSSIVVDQRLRSDASLGIKLMRAYAACGEPRITRHL 55
>ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = -1
Query: 165 ELCGEILDQYPDTKSLKKLHSKIVTDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
EL G++LDQYPD K+LK +HSK V + NPS+ IKL+RAYAARG AR+V
Sbjct: 36 ELLGKVLDQYPDIKTLKNVHSK-VFNLSFHENPSLGIKLMRAYAARGEPGLARNV 89
>ref|XP_006404171.1| hypothetical protein EUTSA_v10010175mg [Eutrema salsugineum]
gi|557105290|gb|ESQ45624.1| hypothetical protein
EUTSA_v10010175mg [Eutrema salsugineum]
Length = 671
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = -1
Query: 270 RHYSTVNQLELETIISRR-LPGVKSAHKHNTIFLSEELCGEILDQYPDTKSLKKLHSKIV 94
RH+ + + + S P ++ H T + + L G++LD YPD K+L+ +HS+I+
Sbjct: 11 RHFPKFRKFQTRNLASSAPKPELEPKRPHGTSYFHDNLLGQVLDTYPDLKTLRIVHSRII 70
Query: 93 TDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
+ LR + S+ +KL+RAYAA V AR V
Sbjct: 71 LED-LRCDSSLGVKLMRAYAALKDVALARKV 100
>ref|XP_006366638.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Solanum tuberosum]
Length = 677
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -1
Query: 174 LSEELCGEILDQYPDTKSLKKLHSKIVTDQRLRGNPSIAIKLIRAYAARGGVDCARHV 1
+ E ILD+ PD K+LKKLHSKI+ D L N S+AIKL+RAYAA G + R +
Sbjct: 35 VDEVSSSRILDRLPDIKTLKKLHSKIIFDPGLCNNTSLAIKLMRAYAACGQPNVTRQL 92