BLASTX nr result
ID: Rheum21_contig00035023
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00035023
(402 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004511971.1| PREDICTED: upstream activation factor subuni... 79 8e-13
ref|XP_002522329.1| Upstream activation factor subunit UAF30, pu... 78 1e-12
ref|XP_003632462.1| PREDICTED: upstream activation factor subuni... 78 1e-12
ref|XP_003537360.1| PREDICTED: upstream activation factor subuni... 78 1e-12
emb|CBI23284.3| unnamed protein product [Vitis vinifera] 78 1e-12
emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera] 78 1e-12
ref|XP_004148436.1| PREDICTED: upstream activation factor subuni... 77 2e-12
ref|XP_003517282.1| PREDICTED: upstream activation factor subuni... 75 9e-12
gb|ESW28831.1| hypothetical protein PHAVU_002G021500g [Phaseolus... 74 2e-11
gb|ESW28830.1| hypothetical protein PHAVU_002G021500g [Phaseolus... 74 2e-11
ref|XP_002306454.2| hypothetical protein POPTR_0005s14110g [Popu... 72 6e-11
ref|XP_003611801.1| Upstream activation factor subunit spp27 [Me... 72 6e-11
ref|XP_006425831.1| hypothetical protein CICLE_v10026010mg [Citr... 72 1e-10
gb|ABF99032.1| SWIB complex BAF60b domain-containing protein, pu... 71 1e-10
gb|AAL34119.1|AC090713_6 putative parathymosin [Oryza sativa Jap... 71 1e-10
gb|EXB63556.1| Upstream activation factor subunit spp27 [Morus n... 71 2e-10
gb|EOX91318.1| SWIB complex BAF60b domain-containing protein, pu... 70 2e-10
gb|EOX91317.1| SWIB complex BAF60b domain-containing protein, pu... 70 2e-10
ref|XP_006650641.1| PREDICTED: upstream activation factor subuni... 70 4e-10
ref|XP_002313088.2| hypothetical protein POPTR_0009s10990g [Popu... 69 5e-10
>ref|XP_004511971.1| PREDICTED: upstream activation factor subunit spp27-like [Cicer
arietinum]
Length = 352
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/68 (54%), Positives = 55/68 (80%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MVS+++L+G +R+FLRS+DL TT S VRR+LE DFG++LS RK FIR+QV++F+ + VQ
Sbjct: 1 MVSESELIGRLREFLRSSDLNTTTTSTVRRQLESDFGIDLSDRKAFIREQVDLFL-QSVQ 59
Query: 369 EESDDEAE 392
++ D + E
Sbjct: 60 QQQDAQEE 67
>ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis] gi|223538407|gb|EEF40013.1| Upstream
activation factor subunit UAF30, putative [Ricinus
communis]
Length = 322
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/69 (49%), Positives = 53/69 (76%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MVSD++L+ +R+FL+++DL TT IVRR+LE+DFG++LS +K FIR+QV++F+ +
Sbjct: 1 MVSDSELIERLREFLKNSDLNTTTTGIVRRQLEEDFGIDLSDKKAFIREQVDLFLQSQFE 60
Query: 369 EESDDEAEE 395
E +E EE
Sbjct: 61 ENDQNEEEE 69
>ref|XP_003632462.1| PREDICTED: upstream activation factor subunit spp27-like [Vitis
vinifera]
Length = 296
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/68 (50%), Positives = 53/68 (77%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MVSD++LV + +FLRS+DL TT +IVRRKLE+DFG++LS +K FIR+ V++F+ ++
Sbjct: 1 MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQSQLE 60
Query: 369 EESDDEAE 392
+ +DE +
Sbjct: 61 KAEEDEGD 68
>ref|XP_003537360.1| PREDICTED: upstream activation factor subunit spp27-like [Glycine
max]
Length = 346
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/70 (51%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIY-KHV 365
MVS+++L+G +R+FLRS+DL TT + VRR+LE DFG++LS RK FIR+QV++F+ +H
Sbjct: 1 MVSESELIGRLREFLRSSDLNTTTTATVRRQLEADFGIDLSDRKAFIREQVDLFLQTEHN 60
Query: 366 QEESDDEAEE 395
Q + ++E +E
Sbjct: 61 QSQQEEEEKE 70
>emb|CBI23284.3| unnamed protein product [Vitis vinifera]
Length = 303
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/68 (50%), Positives = 53/68 (77%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MVSD++LV + +FLRS+DL TT +IVRRKLE+DFG++LS +K FIR+ V++F+ ++
Sbjct: 1 MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQSQLE 60
Query: 369 EESDDEAE 392
+ +DE +
Sbjct: 61 KAEEDEGD 68
>emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
Length = 332
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/68 (50%), Positives = 53/68 (77%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MVSD++LV + +FLRS+DL TT +IVRRKLE+DFG++LS +K FIR+ V++F+ ++
Sbjct: 1 MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQSQLE 60
Query: 369 EESDDEAE 392
+ +DE +
Sbjct: 61 KAEEDEGD 68
>ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 332
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 11/80 (13%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFI----- 353
MVSD++L+ +RDFLR++DL TT +IVRRKLE+DFG++LS +K FIR+QV++F+
Sbjct: 1 MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60
Query: 354 ------YKHVQEESDDEAEE 395
Y H +E ++ +E
Sbjct: 61 KAVQEGYAHCEEVHQEDGDE 80
>ref|XP_003517282.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Glycine max]
Length = 337
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/74 (51%), Positives = 56/74 (75%), Gaps = 5/74 (6%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIY-KHV 365
MVS+++L+G +R+FLRS+DL TT + VRR+LE DFG++LS RK FIR+QV++F+ +H
Sbjct: 1 MVSESELIGRLREFLRSSDLNTTTTATVRRQLEADFGIDLSDRKAFIREQVDLFLQTEHN 60
Query: 366 Q----EESDDEAEE 395
Q E +D+ EE
Sbjct: 61 QPQQEERQNDDVEE 74
>gb|ESW28831.1| hypothetical protein PHAVU_002G021500g [Phaseolus vulgaris]
Length = 340
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/75 (46%), Positives = 56/75 (74%), Gaps = 6/75 (8%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIY---- 356
MVS+++L+G +R+FLR++DL TT + VRR+LE DFG++LS RK FIR+QV++F+
Sbjct: 1 MVSESELIGRLREFLRNSDLNTTTTATVRRQLEADFGIDLSHRKAFIREQVDLFLQTEHN 60
Query: 357 --KHVQEESDDEAEE 395
+ Q+++DD E+
Sbjct: 61 QPQQQQQQNDDVPED 75
>gb|ESW28830.1| hypothetical protein PHAVU_002G021500g [Phaseolus vulgaris]
Length = 341
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/75 (46%), Positives = 56/75 (74%), Gaps = 6/75 (8%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIY---- 356
MVS+++L+G +R+FLR++DL TT + VRR+LE DFG++LS RK FIR+QV++F+
Sbjct: 1 MVSESELIGRLREFLRNSDLNTTTTATVRRQLEADFGIDLSHRKAFIREQVDLFLQTEHN 60
Query: 357 --KHVQEESDDEAEE 395
+ Q+++DD E+
Sbjct: 61 QPQQQQQQNDDVPED 75
>ref|XP_002306454.2| hypothetical protein POPTR_0005s14110g [Populus trichocarpa]
gi|550338891|gb|EEE93450.2| hypothetical protein
POPTR_0005s14110g [Populus trichocarpa]
Length = 316
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/70 (47%), Positives = 50/70 (71%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MVSD++L +++FLR+ADL KTT VRRKLE+DF ++LS +K FIR+QV++F+ +
Sbjct: 1 MVSDSELTERLKEFLRNADLDKTTTGTVRRKLEEDFAIDLSDKKVFIREQVDLFLQNELD 60
Query: 369 EESDDEAEEY 398
+ + EY
Sbjct: 61 DGQKNGDNEY 70
>ref|XP_003611801.1| Upstream activation factor subunit spp27 [Medicago truncatula]
gi|355513136|gb|AES94759.1| Upstream activation factor
subunit spp27 [Medicago truncatula]
Length = 361
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MVS+++L+ +R+FLR++DL TT S VRR+LE DFG++LS RK FIR+QV++F+ Q
Sbjct: 1 MVSESELIDRLREFLRNSDLNTTTTSTVRRQLESDFGIDLSDRKSFIREQVDLFLQTVQQ 60
Query: 369 --EESDDEAEE 395
E +D EE
Sbjct: 61 DDEPQNDAVEE 71
>ref|XP_006425831.1| hypothetical protein CICLE_v10026010mg [Citrus clementina]
gi|568824530|ref|XP_006466650.1| PREDICTED: upstream
activation factor subunit spp27-like [Citrus sinensis]
gi|557527821|gb|ESR39071.1| hypothetical protein
CICLE_v10026010mg [Citrus clementina]
Length = 338
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/69 (44%), Positives = 51/69 (73%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MVSD++L+ +++FL+++DL TT IVRR+LE DFGV+L+ +K FIR+QV++F+ +
Sbjct: 1 MVSDSELIARLQEFLKNSDLNTTTTGIVRRQLEKDFGVDLTDKKIFIREQVDLFLQSQFE 60
Query: 369 EESDDEAEE 395
+ +D E
Sbjct: 61 NDQNDGGNE 69
>gb|ABF99032.1| SWIB complex BAF60b domain-containing protein, putative, expressed
[Oryza sativa Japonica Group]
gi|218193805|gb|EEC76232.1| hypothetical protein
OsI_13647 [Oryza sativa Indica Group]
gi|222625850|gb|EEE59982.1| hypothetical protein
OsJ_12695 [Oryza sativa Japonica Group]
Length = 334
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/68 (50%), Positives = 52/68 (76%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MVSD++LV +R+ LRS+DL TT +I+RR+LE+DFGV+LS +K FIR+QV++ + +
Sbjct: 1 MVSDSELVERLREVLRSSDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLLSEVAG 60
Query: 369 EESDDEAE 392
+ +EAE
Sbjct: 61 KAEQEEAE 68
>gb|AAL34119.1|AC090713_6 putative parathymosin [Oryza sativa Japonica Group]
Length = 303
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/68 (50%), Positives = 52/68 (76%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MVSD++LV +R+ LRS+DL TT +I+RR+LE+DFGV+LS +K FIR+QV++ + +
Sbjct: 1 MVSDSELVERLREVLRSSDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLLSEVAG 60
Query: 369 EESDDEAE 392
+ +EAE
Sbjct: 61 KAEQEEAE 68
>gb|EXB63556.1| Upstream activation factor subunit spp27 [Morus notabilis]
Length = 463
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MV D L +RD LRS+DL TT VRR+LE DFGV+LS RK FI +Q+++F+ H+
Sbjct: 1 MVPDKKLAERLRDILRSSDLDTTTPGSVRRQLEADFGVDLSDRKAFIGEQIDLFLASHMA 60
Query: 369 EESDDEAEEYG 401
++E EE G
Sbjct: 61 NPQEEEVEEDG 71
>gb|EOX91318.1| SWIB complex BAF60b domain-containing protein, putative isoform 2,
partial [Theobroma cacao]
Length = 241
Score = 70.5 bits (171), Expect = 2e-10
Identities = 29/69 (42%), Positives = 51/69 (73%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MV D++L+ +R+FL+ +DL TT +IVRR+LE+DF ++LS++K FIR+QV++++ +
Sbjct: 1 MVLDSELIARLREFLKESDLNTTTTAIVRRRLEEDFRIDLSEKKKFIREQVDLYLQSQFE 60
Query: 369 EESDDEAEE 395
+ E E+
Sbjct: 61 NAEEQEQEQ 69
>gb|EOX91317.1| SWIB complex BAF60b domain-containing protein, putative isoform 1
[Theobroma cacao]
Length = 322
Score = 70.5 bits (171), Expect = 2e-10
Identities = 29/69 (42%), Positives = 51/69 (73%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MV D++L+ +R+FL+ +DL TT +IVRR+LE+DF ++LS++K FIR+QV++++ +
Sbjct: 1 MVLDSELIARLREFLKESDLNTTTTAIVRRRLEEDFRIDLSEKKKFIREQVDLYLQSQFE 60
Query: 369 EESDDEAEE 395
+ E E+
Sbjct: 61 NAEEQEQEQ 69
>ref|XP_006650641.1| PREDICTED: upstream activation factor subunit spp27-like [Oryza
brachyantha]
Length = 338
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFIYKHVQ 368
MVSD++LV +R+ LR +DL TT +I+RR+LE+DFGV+LS +K FIR+QV++ + +
Sbjct: 1 MVSDSELVERLREVLRESDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLLSEVAG 60
Query: 369 EESDDEAE 392
+ +EAE
Sbjct: 61 KAEQEEAE 68
>ref|XP_002313088.2| hypothetical protein POPTR_0009s10990g [Populus trichocarpa]
gi|550331482|gb|EEE87043.2| hypothetical protein
POPTR_0009s10990g [Populus trichocarpa]
Length = 242
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/55 (56%), Positives = 45/55 (81%)
Frame = +3
Query: 189 MVSDADLVGGIRDFLRSADLKKTTVSIVRRKLEDDFGVNLSQRKPFIRQQVEIFI 353
MVSD+DLV +R+ LRS+DL T S +RR+LE+DFGV+LS++K FIR+Q++ F+
Sbjct: 1 MVSDSDLVARLREILRSSDLDTATASSIRRQLEEDFGVDLSEKKKFIREQIDTFL 55