BLASTX nr result
ID: Rheum21_contig00033438
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00033438
(307 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB55262.1| hypothetical protein L484_017166 [Morus notabilis] 59 5e-07
ref|XP_004485595.1| PREDICTED: splicing factor 3B subunit 1-like... 59 5e-07
ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncat... 59 5e-07
ref|XP_002323970.1| hypothetical protein POPTR_0017s07760g [Popu... 59 9e-07
ref|XP_006476058.1| PREDICTED: splicing factor 3B subunit 1-like... 58 1e-06
gb|ESW20037.1| hypothetical protein PHAVU_006G175600g [Phaseolus... 58 1e-06
ref|XP_006450667.1| hypothetical protein CICLE_v10010658mg [Citr... 58 1e-06
ref|XP_006394172.1| hypothetical protein EUTSA_v10005618mg [Eutr... 58 1e-06
ref|XP_004951909.1| PREDICTED: splicing factor 3B subunit 1-like... 58 1e-06
gb|EOX98735.1| Splicing factor, putative [Theobroma cacao] 58 1e-06
ref|XP_006282032.1| hypothetical protein CARUB_v10028273mg [Caps... 58 1e-06
ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like... 58 1e-06
ref|NP_201232.1| putative splicing factor [Arabidopsis thaliana]... 58 1e-06
gb|AFW70128.1| antigenic determinant of rec-A protein, mRNA isof... 58 1e-06
gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays] g... 58 1e-06
ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like... 58 1e-06
ref|XP_002864893.1| hypothetical protein ARALYDRAFT_496629 [Arab... 58 1e-06
ref|XP_002451534.1| hypothetical protein SORBIDRAFT_04g003370 [S... 58 1e-06
ref|XP_002457124.1| hypothetical protein SORBIDRAFT_03g001680 [S... 58 1e-06
ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like... 58 1e-06
>gb|EXB55262.1| hypothetical protein L484_017166 [Morus notabilis]
Length = 1270
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LGSSDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 837 IEKVVANLGSSDIDARLEELLIDGILYAFQEQTSDD 872
>ref|XP_004485595.1| PREDICTED: splicing factor 3B subunit 1-like [Cicer arietinum]
Length = 1255
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LGSSDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 822 IEKVVTNLGSSDIDARLEELLIDGILYAFQEQTSDD 857
>ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355482272|gb|AES63475.1| Splicing factor 3B subunit
[Medicago truncatula]
Length = 1378
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LGSSDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 831 IEKVVTNLGSSDIDARLEELLIDGILYAFQEQTSDD 866
>ref|XP_002323970.1| hypothetical protein POPTR_0017s07760g [Populus trichocarpa]
gi|222866972|gb|EEF04103.1| hypothetical protein
POPTR_0017s07760g [Populus trichocarpa]
Length = 1267
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + +GSSDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 834 IEKVVTNMGSSDIDARLEELLIDGILYAFQEQTSDD 869
>ref|XP_006476058.1| PREDICTED: splicing factor 3B subunit 1-like [Citrus sinensis]
Length = 1265
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 832 IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDD 867
>gb|ESW20037.1| hypothetical protein PHAVU_006G175600g [Phaseolus vulgaris]
Length = 1261
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 828 IEKVVTNLGASDIDARLEELLIDGILYAFQEQTSDD 863
>ref|XP_006450667.1| hypothetical protein CICLE_v10010658mg [Citrus clementina]
gi|557553893|gb|ESR63907.1| hypothetical protein
CICLE_v10010658mg [Citrus clementina]
Length = 1265
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 832 IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDD 867
>ref|XP_006394172.1| hypothetical protein EUTSA_v10005618mg [Eutrema salsugineum]
gi|557090811|gb|ESQ31458.1| hypothetical protein
EUTSA_v10005618mg [Eutrema salsugineum]
Length = 1260
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 3/39 (7%)
Frame = -2
Query: 231 IESFDSV---LGSSDIDARLEELLIDGILYAFQEQTNDD 124
+E+ D V LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 824 METIDKVITNLGASDIDARLEELLIDGILYAFQEQTSDD 862
>ref|XP_004951909.1| PREDICTED: splicing factor 3B subunit 1-like isoform X1 [Setaria
italica] gi|514709941|ref|XP_004951910.1| PREDICTED:
splicing factor 3B subunit 1-like isoform X2 [Setaria
italica] gi|514709948|ref|XP_004951911.1| PREDICTED:
splicing factor 3B subunit 1-like isoform X3 [Setaria
italica]
Length = 1278
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 845 IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDD 880
>gb|EOX98735.1| Splicing factor, putative [Theobroma cacao]
Length = 1266
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 833 IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDD 868
>ref|XP_006282032.1| hypothetical protein CARUB_v10028273mg [Capsella rubella]
gi|482550736|gb|EOA14930.1| hypothetical protein
CARUB_v10028273mg [Capsella rubella]
Length = 1269
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 3/39 (7%)
Frame = -2
Query: 231 IESFDSV---LGSSDIDARLEELLIDGILYAFQEQTNDD 124
+E+ D V LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 833 METIDKVVTNLGASDIDARLEELLIDGILYAFQEQTSDD 871
>ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus]
gi|449523197|ref|XP_004168610.1| PREDICTED: splicing
factor 3B subunit 1-like [Cucumis sativus]
Length = 1262
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 829 IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDD 864
>ref|NP_201232.1| putative splicing factor [Arabidopsis thaliana]
gi|9759403|dbj|BAB09858.1| nuclear protein-like
[Arabidopsis thaliana] gi|332010481|gb|AED97864.1|
putative splicing factor [Arabidopsis thaliana]
Length = 1269
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 3/39 (7%)
Frame = -2
Query: 231 IESFDSV---LGSSDIDARLEELLIDGILYAFQEQTNDD 124
+E+ D V LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 833 METIDKVVTNLGASDIDARLEELLIDGILYAFQEQTSDD 871
>gb|AFW70128.1| antigenic determinant of rec-A protein, mRNA isoform 1 [Zea mays]
gi|413935578|gb|AFW70129.1| antigenic determinant of
rec-A protein, mRNA isoform 2 [Zea mays]
gi|413935579|gb|AFW70130.1| antigenic determinant of
rec-A protein, mRNA isoform 3 [Zea mays]
gi|413935580|gb|AFW70131.1| antigenic determinant of
rec-A protein, mRNA isoform 4 [Zea mays]
Length = 1280
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 847 IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDD 882
>gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays]
gi|413926603|gb|AFW66535.1| hypothetical protein
ZEAMMB73_641784 [Zea mays]
Length = 1280
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 847 IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDD 882
>ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like [Glycine max]
Length = 1172
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 739 IEKVVTNLGASDIDARLEELLIDGILYAFQEQTSDD 774
>ref|XP_002864893.1| hypothetical protein ARALYDRAFT_496629 [Arabidopsis lyrata subsp.
lyrata] gi|297310728|gb|EFH41152.1| hypothetical protein
ARALYDRAFT_496629 [Arabidopsis lyrata subsp. lyrata]
Length = 1264
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 3/39 (7%)
Frame = -2
Query: 231 IESFDSV---LGSSDIDARLEELLIDGILYAFQEQTNDD 124
+E+ D V LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 828 METIDKVVTNLGASDIDARLEELLIDGILYAFQEQTSDD 866
>ref|XP_002451534.1| hypothetical protein SORBIDRAFT_04g003370 [Sorghum bicolor]
gi|241931365|gb|EES04510.1| hypothetical protein
SORBIDRAFT_04g003370 [Sorghum bicolor]
Length = 1280
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 847 IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDD 882
>ref|XP_002457124.1| hypothetical protein SORBIDRAFT_03g001680 [Sorghum bicolor]
gi|241929099|gb|EES02244.1| hypothetical protein
SORBIDRAFT_03g001680 [Sorghum bicolor]
Length = 1287
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 854 IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDD 889
>ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like [Vitis vinifera]
Length = 1271
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -2
Query: 231 IESFDSVLGSSDIDARLEELLIDGILYAFQEQTNDD 124
IE + LG+SDIDARLEELLIDGILYAFQEQT+DD
Sbjct: 838 IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDD 873