BLASTX nr result
ID: Rheum21_contig00033436
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00033436
(467 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY16504.1| Pentatricopeptide repeat (PPR) superfamily protei... 206 3e-51
ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat... 205 4e-51
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera] 205 4e-51
ref|XP_002302206.2| pentatricopeptide repeat-containing family p... 204 7e-51
gb|ESW09499.1| hypothetical protein PHAVU_009G132600g [Phaseolus... 204 1e-50
ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat... 201 6e-50
ref|XP_004502561.1| PREDICTED: putative pentatricopeptide repeat... 201 8e-50
ref|XP_002520265.1| pentatricopeptide repeat-containing protein,... 201 1e-49
ref|XP_004237912.1| PREDICTED: putative pentatricopeptide repeat... 198 5e-49
ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containi... 198 7e-49
ref|XP_006364856.1| PREDICTED: putative pentatricopeptide repeat... 198 7e-49
gb|EMJ25378.1| hypothetical protein PRUPE_ppa016584mg [Prunus pe... 197 9e-49
ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago t... 197 9e-49
ref|XP_006434327.1| hypothetical protein CICLE_v10000495mg [Citr... 197 1e-48
gb|EPS66240.1| hypothetical protein M569_08541 [Genlisea aurea] 191 7e-47
ref|XP_004299926.1| PREDICTED: putative pentatricopeptide repeat... 191 7e-47
gb|EXB42572.1| Putative pentatricopeptide repeat-containing prot... 185 6e-45
ref|XP_006301154.1| hypothetical protein CARUB_v10021551mg [Caps... 183 2e-44
ref|NP_177827.1| pentatricopeptide repeat-containing protein [Ar... 183 2e-44
ref|XP_002887666.1| pentatricopeptide repeat-containing protein ... 181 1e-43
>gb|EOY16504.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 675
Score = 206 bits (524), Expect = 3e-51
Identities = 93/157 (59%), Positives = 118/157 (75%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
++ GEQ F + IGL SD +I T+L+D YCKCG V+ G+++FD+MT D +SWNSML+G
Sbjct: 446 IELGEQVFAKATLIGLESDQVISTSLVDFYCKCGLVEYGKKIFDTMTKSDEISWNSMLMG 505
Query: 287 YATNGHGNEALILFSKMKRV--KPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNGHG EAL LF++M+ +P DITF +LS C HCGL+ E RKWF +M+ + I P
Sbjct: 506 YATNGHGFEALALFNEMRNAGARPTDITFTGVLSACDHCGLLEEGRKWFDSMKWDYHIDP 565
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCMVDLY+RAG LEEAM LIEQMP+K D S+W
Sbjct: 566 GIEHYSCMVDLYARAGCLEEAMNLIEQMPFKEDVSLW 602
Score = 71.6 bits (174), Expect = 1e-10
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 33/179 (18%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVD----------------------- 357
++ G+Q V GL DP++ +ALI+LY KCG +D
Sbjct: 182 IEYGKQIHAHMVVEGLEFDPVLWSALINLYGKCGDLDSASRVLNLMKEPDDFSLSALISG 241
Query: 356 --------LGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKM--KRVKPNDITF 207
RRLFD +++ +V WNS++ G+A N EAL LF+KM K+V+ + +
Sbjct: 242 YASCGRMTYARRLFDKISDPSVVLWNSLISGHALNNEEIEALALFNKMREKKVQEDFSSI 301
Query: 206 MAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQM 30
+LS C ++E K H +K + S ++D YS+ G +A + ++
Sbjct: 302 AVVLSACSSL-CISEHVKQMHGHAHKIGVIHDVIIASTLIDAYSKCGRPNDACKFFSEL 359
Score = 59.3 bits (142), Expect = 5e-07
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Frame = -1
Query: 419 ASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSK 240
A D ++ ++I +Y CG ++ + LF +M L+SWNSM+VG + NG EAL F K
Sbjct: 361 AYDTVLLNSMITVYSSCGRIEDAKYLFKTMPTKSLISWNSMIVGLSQNGCPIEALDTFCK 420
Query: 239 MKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAG 66
M + + + + +++S C + + F + + +VD Y + G
Sbjct: 421 MNKLDLMMDKFSLASVISACASISCIELGEQVF-AKATLIGLESDQVISTSLVDFYCKCG 479
Query: 65 YLEEAMELIEQMPYKPDTSMW 3
+E ++ + M K D W
Sbjct: 480 LVEYGKKIFDTMT-KSDEISW 499
Score = 58.9 bits (141), Expect = 7e-07
Identities = 37/131 (28%), Positives = 65/131 (49%)
Frame = -1
Query: 422 LASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFS 243
L+S I L+ LY +C +LFD M + + SWN+++ GY +G+ ++L LF
Sbjct: 37 LSSTITIGNRLLQLYSRCSTTTETWKLFDEMPHRNCFSWNTVIEGYMKSGNKEKSLELFK 96
Query: 242 KMKRVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGY 63
+ ND ++ ++SG G + AR F M K + ++ M+ Y+R G
Sbjct: 97 LIPH--KNDFSWNLVISGLAKAGELEVARDLFDNMPRKNGVA-----WNSMIHGYARHGN 149
Query: 62 LEEAMELIEQM 30
+A+EL + +
Sbjct: 150 ARKAVELFKDL 160
>ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 205 bits (522), Expect = 4e-51
Identities = 98/157 (62%), Positives = 115/157 (73%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ F R IGL D II T+L+D YCKCG V+ GR+LFD M D V WNSML+G
Sbjct: 453 LELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMG 512
Query: 287 YATNGHGNEALILFSKMKRV--KPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNGHG EAL +F +M+ V +P DITF+ +LS C HCGLV E RKWF+ M+ + I P
Sbjct: 513 YATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINP 572
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCMVDLY+RAG LE+AM LIEQMP K DTSMW
Sbjct: 573 GIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMW 609
Score = 68.6 bits (166), Expect = 8e-10
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D +ALI Y CG ++ RR+F +N +V WNSM+ GY N EAL LF+ M+
Sbjct: 238 DAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMR 297
Query: 233 R--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYL 60
R V+ + TF ++LS C G++ + + H K T S +VD+YS+
Sbjct: 298 RKGVQEDYSTFASVLSACSTLGIIDQGIQ-VHAHVYKVGFTNDIIIDSALVDMYSKCRRP 356
Query: 59 EEAMELIEQM 30
++A +L +
Sbjct: 357 DDACKLFSDL 366
Score = 67.8 bits (164), Expect = 1e-09
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = -1
Query: 419 ASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSK 240
A D I+ ++I +Y CG +D R++FD+M + L+SWNSM+VG++ N EAL LF +
Sbjct: 368 AYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCE 427
Query: 239 MKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHY--SCMVDLYSR 72
M + ++ + + ++S C + + F I F+ + +VD Y +
Sbjct: 428 MNKLGLRMDKFSLAGVISACASISSLELGEQIF---ARATIIGLEFDQIISTSLVDFYCK 484
Query: 71 AGYLEEAMELIEQMPYKPDTSMW 3
G +E +L ++M K D W
Sbjct: 485 CGLVEHGRKLFDRM-MKSDEVPW 506
>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 205 bits (522), Expect = 4e-51
Identities = 98/157 (62%), Positives = 115/157 (73%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ F R IGL D II T+L+D YCKCG V+ GR+LFD M D V WNSML+G
Sbjct: 453 LELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMG 512
Query: 287 YATNGHGNEALILFSKMKRV--KPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNGHG EAL +F +M+ V +P DITF+ +LS C HCGLV E RKWF+ M+ + I P
Sbjct: 513 YATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINP 572
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCMVDLY+RAG LE+AM LIEQMP K DTSMW
Sbjct: 573 GIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMW 609
Score = 120 bits (301), Expect = 2e-25
Identities = 57/157 (36%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
+ +G Q V GL SD I+ ++L+++Y K G +D + F + DL+SWN+M++G
Sbjct: 1058 VDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMG 1117
Query: 287 YATNGHGNEALILFSKMK--RVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
A NG ++AL +F ++ P++IT +L C GLV E F +M+ ++ + P
Sbjct: 1118 LAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIP 1177
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHY+C+VD+ SR G L+EAM+++E MP++P +W
Sbjct: 1178 AIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIW 1214
Score = 68.6 bits (166), Expect = 8e-10
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D +ALI Y CG ++ RR+F +N +V WNSM+ GY N EAL LF+ M+
Sbjct: 238 DAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMR 297
Query: 233 R--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYL 60
R V+ + TF ++LS C G++ + + H K T S +VD+YS+
Sbjct: 298 RKGVQEDYSTFASVLSACSTLGIIDQGIQ-VHAHVYKVGFTNDIIIDSALVDMYSKCRRP 356
Query: 59 EEAMELIEQM 30
++A +L +
Sbjct: 357 DDACKLFSDL 366
Score = 68.2 bits (165), Expect = 1e-09
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L++GEQ F + +G S+ I+ +A IDL+ KC ++ R+F+ + D V N+M+
Sbjct: 957 LEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISS 1016
Query: 287 YATNGHGNEALILF--SKMKRVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YA +G G AL LF + + ++P + T +LS L + H++ K +
Sbjct: 1017 YAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSIL-LPVDQGSQIHSLVVKSGLES 1075
Query: 113 RFEHYSCMVDLYSRAGYLEEAME 45
S +V++Y++ G ++ AM+
Sbjct: 1076 DVIVASSLVEMYAKFGLIDSAMK 1098
Score = 67.8 bits (164), Expect = 1e-09
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = -1
Query: 419 ASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSK 240
A D I+ ++I +Y CG +D R++FD+M + L+SWNSM+VG++ N EAL LF +
Sbjct: 368 AYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCE 427
Query: 239 MKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHY--SCMVDLYSR 72
M + ++ + + ++S C + + F I F+ + +VD Y +
Sbjct: 428 MNKLGLRMDKFSLAGVISACASISSLELGEQIF---ARATIIGLEFDQIISTSLVDFYCK 484
Query: 71 AGYLEEAMELIEQMPYKPDTSMW 3
G +E +L ++M K D W
Sbjct: 485 CGLVEHGRKLFDRM-MKSDEVPW 506
Score = 56.6 bits (135), Expect = 3e-06
Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Frame = -1
Query: 461 RGEQCFGRTVTIGL-ASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGY 285
RG+Q + G+ S+ ++ +LI +Y K G VD +F +M LD++SWNS++
Sbjct: 857 RGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSC 916
Query: 284 ATNGHGNEALILFSKMKRV--KPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPR 111
+G+ N AL F M+ V P+ T +++ C + + + + F + +
Sbjct: 917 GKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIF-ALCIRVGFLSN 975
Query: 110 FEHYSCMVDLYSRAGYLEEAMELIEQM 30
S +DL+S+ LE+++ + E++
Sbjct: 976 SIVSSASIDLFSKCNRLEDSVRVFEEI 1002
>ref|XP_002302206.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344485|gb|EEE81479.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 681
Score = 204 bits (520), Expect = 7e-51
Identities = 92/157 (58%), Positives = 119/157 (75%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ F R +GL SD +I T+L+D YCKCGF+++GR+LFD+M D +SWNSML+G
Sbjct: 452 LELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMG 511
Query: 287 YATNGHGNEALILFSKMKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNGHG EAL LF++M+ V+P +ITF +LS C HCGLV E +WF+ MQ + I P
Sbjct: 512 YATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDP 571
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCMVDL++RAG LEEAM LI++MP++ D SMW
Sbjct: 572 GIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMW 608
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/129 (27%), Positives = 66/129 (51%)
Frame = -1
Query: 404 ICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKRVK 225
+ L+ +Y +CG + +LFD M + + SWN+M+ GY +G+ ++ LF M
Sbjct: 43 LANRLLQMYTRCGSMTNAHKLFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMMS--N 100
Query: 224 PNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAME 45
ND ++ + SG G + AR+ F+ M N+ + ++ M+ Y+R G EA+
Sbjct: 101 KNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRNGVV-----WNSMIHSYARNGSPREAVR 155
Query: 44 LIEQMPYKP 18
L +++ P
Sbjct: 156 LFKELNLDP 164
Score = 60.5 bits (145), Expect = 2e-07
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 33/187 (17%)
Frame = -1
Query: 464 QRGEQCFGRTVTIGLASDPIICTALIDLYCKCGF-------------------------- 363
Q G+Q +GL D ++ +A ID Y KCG
Sbjct: 321 QHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVY 380
Query: 362 -----VDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKR--VKPNDITFM 204
++ +++F++M + L+SWNSM+VG + NG EAL LF M + ++ N
Sbjct: 381 SNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLT 440
Query: 203 AILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQMPY 24
+++S C + E + + + +VD Y + G++E +L + M
Sbjct: 441 SVISACASISSL-ELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTM-M 498
Query: 23 KPDTSMW 3
K D W
Sbjct: 499 KSDEISW 505
>gb|ESW09499.1| hypothetical protein PHAVU_009G132600g [Phaseolus vulgaris]
Length = 699
Score = 204 bits (518), Expect = 1e-50
Identities = 95/157 (60%), Positives = 118/157 (75%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ FG+ VTIGL SD II T+L+D YCKCGFV +GR++FD M D VSWN+ML+G
Sbjct: 470 LELGEQVFGKAVTIGLDSDQIISTSLVDFYCKCGFVKIGRKVFDGMVKTDEVSWNTMLMG 529
Query: 287 YATNGHGNEALILFSKMK--RVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YA NGHG EAL LFS+M+ VKP+ ITF +LS C HCGLV E R FHTM + + I P
Sbjct: 530 YAANGHGIEALTLFSEMRYCGVKPSAITFTGVLSACDHCGLVEEGRYLFHTMTHNYNINP 589
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCMVDL++RAG EEAM+L+ +MP++ D +MW
Sbjct: 590 GIEHYSCMVDLFARAGCFEEAMDLMAEMPFQADANMW 626
Score = 63.5 bits (153), Expect = 3e-08
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Frame = -1
Query: 467 LQRGEQCFGRTVT--IGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLD-------- 318
L G+Q R +GL D ++C++LI+LY KCG +D R+ S+ +D
Sbjct: 204 LNCGKQVHARVFVDGLGLDLDRVLCSSLINLYGKCGDLDGAARVISSVREVDDFSFSALI 263
Query: 317 -----------------------LVSWNSMLVGYATNGHGNEALILFSKMKR-VKPNDIT 210
+V WNS++ GY +NG EA+ LFS M R D++
Sbjct: 264 SGYANAGRMREARRVFDIKVDPCVVLWNSIISGYVSNGEEMEAVNLFSAMLRNGVRGDVS 323
Query: 209 FMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQM 30
+A + G C LV E + H K T S ++D YS+ EA +L ++
Sbjct: 324 TVANILSAGSCLLVVELVRQMHAYGFKAGATHDIVVASALLDAYSKCQSPCEACKLFSEL 383
Score = 56.2 bits (134), Expect = 4e-06
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Frame = -1
Query: 419 ASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSK 240
A D I+ +I +Y CG ++ + +F++M L+SWNS+LVG N EAL +F +
Sbjct: 385 AYDTILLNTMISVYSNCGRIEDAKWIFNTMPKKTLISWNSILVGLTQNACPIEALDVFCQ 444
Query: 239 MKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAG 66
M + +K + +F +++S C + + F + + S +VD Y + G
Sbjct: 445 MNKLDLKMDKFSFASVISACASKSSLELGEQVFGKAVTIGLDSDQIISTS-LVDFYCKCG 503
Query: 65 YLEEAMELIEQMPYKPDTSMW 3
+++ ++ + M K D W
Sbjct: 504 FVKIGRKVFDGM-VKTDEVSW 523
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/134 (25%), Positives = 65/134 (48%)
Frame = -1
Query: 404 ICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKRVK 225
+ L+ LY +CGF+ LFD M + + SWN+++ + +GH + A LF+ M
Sbjct: 59 VANRLLQLYTRCGFLRDASHLFDEMPSTNSFSWNTLVQAHLNSGHTHNAFHLFNAMPH-- 116
Query: 224 PNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAME 45
++ ++S G + A F+ M +K + ++ ++ YSR G+ +A+
Sbjct: 117 KTHFSWNMVVSSFAKSGHLQLAYSLFNAMPSKNHLV-----WNSIIHSYSRHGHPGKALF 171
Query: 44 LIEQMPYKPDTSMW 3
L ++M P M+
Sbjct: 172 LFKRMNSDPAQIMY 185
>ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Glycine max]
Length = 678
Score = 201 bits (512), Expect = 6e-50
Identities = 93/157 (59%), Positives = 119/157 (75%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ FG+ +TIGL SD II T+L+D YCKCGFV++GR++FD M D VSWN+ML+G
Sbjct: 449 LELGEQVFGKAITIGLESDQIISTSLVDFYCKCGFVEIGRKVFDGMVKTDEVSWNTMLMG 508
Query: 287 YATNGHGNEALILFSKMK--RVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNG+G EAL LF +M V P+ ITF +LS C H GLV E R FHTM++ + I P
Sbjct: 509 YATNGYGIEALTLFCEMTYGGVWPSAITFTGVLSACDHSGLVEEGRNLFHTMKHSYNINP 568
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EH+SCMVDL++RAGY EEAM+LIE+MP++ D +MW
Sbjct: 569 GIEHFSCMVDLFARAGYFEEAMDLIEEMPFQADANMW 605
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D I+ +I +Y CG ++ + +F++M + L+SWNS+LVG N +EAL +FS+M
Sbjct: 366 DTILLNTMITVYSNCGRIEDAKLIFNTMPSKTLISWNSILVGLTQNACPSEALNIFSQMN 425
Query: 233 R--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYL 60
+ +K + +F +++S C C E + + + +VD Y + G++
Sbjct: 426 KLDLKMDRFSFASVISACA-CRSSLELGEQVFGKAITIGLESDQIISTSLVDFYCKCGFV 484
Query: 59 EEAMELIEQMPYKPDTSMW 3
E ++ + M K D W
Sbjct: 485 EIGRKVFDGM-VKTDEVSW 502
Score = 57.8 bits (138), Expect = 1e-06
Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Frame = -1
Query: 467 LQRGEQCFGRTVT--IGLASDPIICTALIDLYCKCGFVDLGRRL---------------- 342
L G+Q R +GL D ++C++LI+LY KCG +D R+
Sbjct: 183 LNCGKQVHARVFVDGMGLELDRVLCSSLINLYGKCGDLDSAARIVSFVRDVDEFSLSALI 242
Query: 341 ---------------FDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKR-VKPNDIT 210
FDS + V WNS++ GY +NG EA+ LFS M R D +
Sbjct: 243 SGYANAGRMREARSVFDSKVDPCAVLWNSIISGYVSNGEEVEAVNLFSAMLRNGVQGDAS 302
Query: 209 FMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQM 30
+A + LV E K H K +T S ++D YS+ EA +L ++
Sbjct: 303 AVANILSAASGLLVVELVKQMHVYACKAGVTHDIVVASSLLDAYSKCQSPCEACKLFSEL 362
>ref|XP_004502561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Cicer arietinum]
Length = 672
Score = 201 bits (511), Expect = 8e-50
Identities = 91/157 (57%), Positives = 121/157 (77%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ FG+ +T+GL SD II T+L+D YCKCG V++GR++FD M D VSWN+ML+G
Sbjct: 443 LELGEQVFGKAITLGLESDQIISTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMG 502
Query: 287 YATNGHGNEALILFSKMK--RVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNG+G EAL LF++M+ V+P+ ITF +LS C HCGLV E R FHTM++++ I P
Sbjct: 503 YATNGYGIEALRLFNEMRYSGVRPSAITFTGVLSACDHCGLVEEGRNLFHTMKHEYDINP 562
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EH+SCMVDL++RAG EAM LIE+MP++PD +MW
Sbjct: 563 GIEHHSCMVDLFARAGCFGEAMNLIEEMPFQPDANMW 599
Score = 63.5 bits (153), Expect = 3e-08
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D I+ +I +Y CG ++ + +F++M N L+SWNS+LVG N +EAL +F +M
Sbjct: 360 DAILLNTMITVYSSCGRIEDAKWIFNTMPNKTLISWNSILVGLTQNACPSEALDIFCRMN 419
Query: 233 R--VKPNDITFMAILSGCG-----------------------------------HCGLVA 165
+ VK + +F +++S C CGLV
Sbjct: 420 KLDVKMDKFSFASVISACASKSSLELGEQVFGKAITLGLESDQIISTSLVDFYCKCGLVE 479
Query: 164 EARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQMPY 24
RK F M +++ ++ M+ Y+ GY EA+ L +M Y
Sbjct: 480 MGRKVFDGMIKTDEVS-----WNTMLMGYATNGYGIEALRLFNEMRY 521
>ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540484|gb|EEF42051.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 681
Score = 201 bits (510), Expect = 1e-49
Identities = 91/157 (57%), Positives = 117/157 (74%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ F R + GL SD + T+L+D YCKCGF++ GR+LFDSM D VSWNSML+G
Sbjct: 453 LELGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMG 512
Query: 287 YATNGHGNEALILFSKMKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNG+G E L LF++MK+ ++P DITF +LS C HCGLV E RKWF+ M+ + I P
Sbjct: 513 YATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDP 572
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCMVDL++RAG L+EA+ L+E MP++ D SMW
Sbjct: 573 GIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMW 609
Score = 67.0 bits (162), Expect = 2e-09
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Frame = -1
Query: 419 ASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSK 240
A D ++ ++I YC CG + + +F++M + L+SWNS++VG A N + EAL +F K
Sbjct: 368 AYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGK 427
Query: 239 MKR--VKPNDITFMAILSGCG-----HCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDL 81
M + ++ + + +++S C G AR +++ ++ + +VD
Sbjct: 428 MNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQAVS------TSLVDF 481
Query: 80 YSRAGYLEEAMELIEQMPYKPDTSMW 3
Y + G++E +L + M K D W
Sbjct: 482 YCKCGFIENGRKLFDSM-IKTDEVSW 506
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = -1
Query: 404 ICTALIDLYCKCG-FVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKRV 228
+ L+ +Y +CG + LFD M + SWN+M+ GY G +L LF M
Sbjct: 43 LANRLLQMYARCGGTMTDAHNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMP-- 100
Query: 227 KPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAM 48
+ ND ++ ++SG G + A+K F+ M + + ++ M+ Y+R G+ EA+
Sbjct: 101 QKNDYSWNVVISGFAKAGELDVAKKLFNEMPRRNGVA-----WNSMIHGYARNGFAREAV 155
Query: 47 ELIEQMPYKP 18
L +++ P
Sbjct: 156 GLFKELNSNP 165
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Frame = -1
Query: 392 LIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSK-----MKRV 228
+I + K G +D+ ++LF+ M + V+WNSM+ GYA NG EA+ LF + +++
Sbjct: 110 VISGFAKAGELDVAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKS 169
Query: 227 KPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAM 48
+ +++ C G + E K H + S +++LY++ G+L+ A
Sbjct: 170 CGDTFVLASVIGACADLGAI-EYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTAN 228
Query: 47 ELIEQMPYKPDTSM 6
+++ M D S+
Sbjct: 229 YVLKMMDEVDDFSL 242
>ref|XP_004237912.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like isoform 1 [Solanum
lycopersicum] gi|460384427|ref|XP_004237913.1|
PREDICTED: putative pentatricopeptide repeat-containing
protein At1g77010, mitochondrial-like isoform 2 [Solanum
lycopersicum]
Length = 685
Score = 198 bits (504), Expect = 5e-49
Identities = 93/157 (59%), Positives = 117/157 (74%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
++ GEQ F R V IGL D II T+LID YCKCGFV R+LFD M D VSWNSML+G
Sbjct: 456 VELGEQIFARVVIIGLDGDQIITTSLIDFYCKCGFVSDARKLFDQMMKSDEVSWNSMLMG 515
Query: 287 YATNGHGNEALILFSKMKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNG+GNEAL LF +M+ V P +ITF+ +LS C HCGL+ E ++WF++M + I P
Sbjct: 516 YATNGYGNEALNLFHEMRSVGVSPTNITFIGVLSACDHCGLLEEGKRWFYSMNYDYHIDP 575
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCMVDLY+RAG LEEA+ LI++MP++ D+SMW
Sbjct: 576 GIEHYSCMVDLYARAGCLEEAVNLIKKMPFEADSSMW 612
Score = 68.6 bits (166), Expect = 8e-10
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D I+ ++I +Y C ++ R+LF+SM L+SWNSM++G NG EAL LF +M
Sbjct: 373 DTILLNSMITIYFNCNRIEDARQLFESMPYKSLISWNSMIIGLNQNGCPVEALDLFYRMN 432
Query: 233 RV--KPNDITFMAILSGCGHCGLVAEARKWFHT-----MQNKFQITPRFEHYSCMVDLYS 75
R+ + + +F +++S C V + F + IT + ++D Y
Sbjct: 433 RMDFRMDKFSFSSVISACASIASVELGEQIFARVVIIGLDGDQIIT------TSLIDFYC 486
Query: 74 RAGYLEEAMELIEQMPYKPDTSMW 3
+ G++ +A +L +QM K D W
Sbjct: 487 KCGFVSDARKLFDQM-MKSDEVSW 509
Score = 57.0 bits (136), Expect = 3e-06
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 37/168 (22%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D +ALI Y K G +D R++F+ +T+ +V WNSM+ G+ + EAL+LF +M
Sbjct: 241 DNFSLSALISAYSKRGRMDDARKIFNLITDPSIVLWNSMISGFVSCDEVLEALLLFGEMH 300
Query: 233 R--VKPNDITFMAILSGC-----------------------------------GHCGLVA 165
R V + T ++L+ C CG
Sbjct: 301 REGVIGDSSTLASVLNACASAYALKNCLQVHVYGFKLGLLDDLVVASALIDTYAKCGCPD 360
Query: 164 EARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQMPYK 21
EA F+ ++ + I + M+ +Y +E+A +L E MPYK
Sbjct: 361 EASNVFNELKTQDTIL-----LNSMITIYFNCNRIEDARQLFESMPYK 403
>ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
Length = 1390
Score = 198 bits (503), Expect = 7e-49
Identities = 95/157 (60%), Positives = 114/157 (72%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ F R IGL SD II T+L+D YCKCGF+ GR LFD+M D +SWNSML+G
Sbjct: 1161 LELGEQVFARVTIIGLDSDQIISTSLVDFYCKCGFIKNGRILFDAMIKSDEISWNSMLMG 1220
Query: 287 YATNGHGNEALILFSKMKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNG G EAL LF++M+ VKP ITF AILS C HCGLV E +KWF M+ ++ I P
Sbjct: 1221 YATNGQGYEALALFNEMRNTGVKPTIITFTAILSACDHCGLVKEGQKWFDAMKWQYHIDP 1280
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCMVDL++RAG L EA+ LIEQMP++ D MW
Sbjct: 1281 EIEHYSCMVDLFARAGCLNEAVNLIEQMPFEADVGMW 1317
Score = 111 bits (277), Expect = 1e-22
Identities = 55/137 (40%), Positives = 86/137 (62%), Gaps = 3/137 (2%)
Frame = -1
Query: 407 IICT-ALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKR 231
++C AL+++Y KC ++ R+F ++LD+V NSM++G+ N G EAL +F MK+
Sbjct: 525 VVCRGALVEVYTKCRCLEYAIRVFKESSSLDVVICNSMILGFCHNERGREALEVFGLMKK 584
Query: 230 --VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLE 57
+KP+ ITF IL C H G V A ++F +M+ K+ I P+ EHY CM+ LY R GY++
Sbjct: 585 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 644
Query: 56 EAMELIEQMPYKPDTSM 6
E + + +MP+ P M
Sbjct: 645 ELEDFVNRMPFNPTVPM 661
Score = 73.2 bits (178), Expect = 3e-11
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D +ALI Y CG ++ RR+FD T+ V WNSM+ GY +N EAL+LF KM+
Sbjct: 946 DDFCLSALISGYANCGKMNDARRVFDRTTDTSSVLWNSMISGYISNNEDTEALLLFHKMR 1005
Query: 233 R--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYL 60
R V + T ++LS C G + E K H K + S ++D YS+ G
Sbjct: 1006 RNGVLEDASTLASVLSACSSLGFL-EHGKQVHGHACKVGVIDDVIVASALLDTYSKRGMP 1064
Query: 59 EEAMELIEQM 30
+A +L ++
Sbjct: 1065 SDACKLFSEL 1074
Score = 65.5 bits (158), Expect = 7e-09
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = -1
Query: 455 EQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATN 276
+Q G V G + I+ ++L+D Y KC + RR+FD + N + VSWN ++ Y
Sbjct: 176 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 235
Query: 275 GHGNEALILFSKMKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEH 102
G+ EA+++F KM R ++P + TF L C E + H + K
Sbjct: 236 GNVKEAVVVFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVV 294
Query: 101 YSCMVDLYSRAGYLEEAMELIEQ 33
+ ++Y + G LE+A L++Q
Sbjct: 295 LGSLTEMYVKCGRLEDARGLLDQ 317
Score = 63.9 bits (154), Expect = 2e-08
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCK---------------------------- 372
L+ G+Q G +G+ D I+ +AL+D Y K
Sbjct: 1029 LEHGKQVHGHACKVGVIDDVIVASALLDTYSKRGMPSDACKLFSELKVYDTILLNTMITV 1088
Query: 371 ---CGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKR--VKPNDITF 207
CG ++ + +F +M N L+SWNSM+VG + NG EAL LF M + ++ + +
Sbjct: 1089 YSSCGRIEDAKHIFRTMPNKSLISWNSMIVGLSQNGSPIEALDLFCNMNKLDLRMDKFSL 1148
Query: 206 MAILSGCGHCGLVAEARKWFHTMQ----NKFQITPRFEHYSCMVDLYSRAGYLEEAMELI 39
+++S C + + + F + + QI + +VD Y + G+++ L
Sbjct: 1149 ASVISACANISSLELGEQVFARVTIIGLDSDQIIS-----TSLVDFYCKCGFIKNGRILF 1203
Query: 38 EQMPYKPDTSMW 3
+ M K D W
Sbjct: 1204 DAM-IKSDEISW 1214
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/125 (29%), Positives = 63/125 (50%)
Frame = -1
Query: 404 ICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKRVK 225
I L+ +Y +CG LFD M + SWN+M+ G+ GH ++L LF+ M +
Sbjct: 752 IANRLLQMYMRCGNPTDALLLFDEMPRRNCFSWNAMIEGFMKLGHKEKSLQLFNVMP--Q 809
Query: 224 PNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAME 45
ND ++ ++SG G + AR F+ M + I ++ M+ Y R G+ EA+
Sbjct: 810 KNDFSWNMLISGFAKAGELKTARTLFNDMPRRNAIA-----WNSMIHCYVRNGFAREAVR 864
Query: 44 LIEQM 30
L +++
Sbjct: 865 LFKEL 869
Score = 62.8 bits (151), Expect = 5e-08
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNL-DLVSWNSMLV 291
++ G++ G +S+ + AL+D+Y KCG + R F M+ D VSWN++L
Sbjct: 405 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 464
Query: 290 GYATNGHGNEALILFSKMK-RVKPNDITFMAILSGCGHCGLVAEARKWFH--TMQNKFQI 120
GYA G EA+ FS+M+ +P+ TF +L+ C + + E K H ++N ++I
Sbjct: 465 GYARRGQREEAMTSFSEMQWETRPSKFTFETLLAACANISSL-EQGKQIHCFMIRNCYEI 523
Query: 119 TPRFEHYSCMVDLYSRAGYLEEAMELIEQ 33
+V++Y++ LE A+ + ++
Sbjct: 524 NVVCR--GALVEVYTKCRCLEYAIRVFKE 550
Score = 58.9 bits (141), Expect = 7e-07
Identities = 42/137 (30%), Positives = 68/137 (49%)
Frame = -1
Query: 458 GEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYAT 279
G Q G + I D ++ +L ++Y KCG ++ R L D +++SW S++ GYA
Sbjct: 276 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIMSGYAI 335
Query: 278 NGHGNEALILFSKMKRVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHY 99
NG EA LF++M + N I++ A+L+G L EA + M+ + T +H
Sbjct: 336 NGRIREARELFNEMP--ERNVISWNAMLAGYTRSLLWKEALDFVFLMR---KTTKDIDHV 390
Query: 98 SCMVDLYSRAGYLEEAM 48
+ + L AG E M
Sbjct: 391 TLGLILNVCAGLSEIKM 407
>ref|XP_006364856.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Solanum tuberosum]
Length = 685
Score = 198 bits (503), Expect = 7e-49
Identities = 93/157 (59%), Positives = 116/157 (73%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
++ GEQ F R V IG+ D II T+LID YCKCGFV R+LFD M D VSWNSML+G
Sbjct: 456 VELGEQIFARAVIIGIDCDQIISTSLIDFYCKCGFVSDARKLFDQMMKSDEVSWNSMLMG 515
Query: 287 YATNGHGNEALILFSKMKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNG+GNEAL LF +M+ V P +ITF+ +LS C HCGL+ E ++WF++M + I P
Sbjct: 516 YATNGYGNEALNLFHEMRSAGVSPTNITFIGVLSACDHCGLLEEGKRWFYSMNYDYHIDP 575
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCMVDLY+RAG LEEA+ LIE+MP+ D+SMW
Sbjct: 576 GIEHYSCMVDLYARAGCLEEAVNLIEKMPFDADSSMW 612
Score = 67.4 bits (163), Expect = 2e-09
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 37/165 (22%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D I+ ++I +Y C ++ R+LF+SM L+SWNSM++G NG EAL LF +M
Sbjct: 373 DTILLNSMITIYFNCNRIEDARQLFESMPYKSLISWNSMIIGLNQNGCPVEALNLFYRMN 432
Query: 233 RV--KPNDITFMAILSGCG-----------------------------------HCGLVA 165
R+ + + +F +++S C CG V+
Sbjct: 433 RMDFRMDKFSFSSVISACASIASVELGEQIFARAVIIGIDCDQIISTSLIDFYCKCGFVS 492
Query: 164 EARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQM 30
+ARK F M +++ ++ M+ Y+ GY EA+ L +M
Sbjct: 493 DARKLFDQMMKSDEVS-----WNSMLMGYATNGYGNEALNLFHEM 532
Score = 62.0 bits (149), Expect = 8e-08
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 37/168 (22%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D +ALI Y KCG +D R++F+ +T+ +V WNSM+ GY + EAL+LF +M
Sbjct: 241 DNFSLSALISAYSKCGRMDDARKIFNLITDPCIVLWNSMISGYVSCYEVLEALLLFEEML 300
Query: 233 R--VKPNDITFMAILSGC-----------------------------------GHCGLVA 165
R V + T ++L+ C CG
Sbjct: 301 REGVIGDSSTLASVLNACASAHALKNCLQVHVYGFKRGLLDDLVVASALIDTYAKCGCPD 360
Query: 164 EARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQMPYK 21
EA K F+ ++ I + M+ +Y +E+A +L E MPYK
Sbjct: 361 EASKVFNELKTHDTIL-----LNSMITIYFNCNRIEDARQLFESMPYK 403
>gb|EMJ25378.1| hypothetical protein PRUPE_ppa016584mg [Prunus persica]
Length = 615
Score = 197 bits (502), Expect = 9e-49
Identities = 91/156 (58%), Positives = 115/156 (73%), Gaps = 2/156 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ F RT IGL + I+C +L+DLYCKCGFV GR LFD M + V+WNSML+G
Sbjct: 386 LEYGEQVFARTTKIGLDCNEIVCNSLVDLYCKCGFVKNGRELFDRMAKSNEVAWNSMLIG 445
Query: 287 YATNGHGNEALILFSKMK--RVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNGHG EAL LF++M+ V+PN+ITF +LS C HCGLV + RKWF M+ + I P
Sbjct: 446 YATNGHGIEALALFNEMRLAGVEPNEITFTGVLSACDHCGLVEDGRKWFSKMKQDYHINP 505
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSM 6
EHY+CM+DL SRAG+LEEA+ L+E MP+K D S+
Sbjct: 506 GIEHYACMIDLLSRAGFLEEAVNLVEVMPFKADASI 541
Score = 67.0 bits (162), Expect = 2e-09
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Frame = -1
Query: 419 ASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSK 240
A D I+ ++I +Y CG V+ +++F +M + L+SWNSM+VG + NG EAL LF +
Sbjct: 301 AFDTILLNSMITVYSNCGRVEDAKQIFKAMPSKSLISWNSMIVGLSQNGCPIEALDLFRQ 360
Query: 239 MKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAG 66
M + + + + ++LS C + + F K + + +VDLY + G
Sbjct: 361 MNKLDLMMDKFSLASVLSSCATTSSLEYGEQVF-ARTTKIGLDCNEIVCNSLVDLYCKCG 419
Query: 65 YLEEAMELIEQM 30
+++ EL ++M
Sbjct: 420 FVKNGRELFDRM 431
Score = 64.7 bits (156), Expect = 1e-08
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D +ALI Y G +D RR+FD+ +N D+ WNS++ GY + AL+LFS+M
Sbjct: 171 DDYSLSALISGYGNSGRMDDARRIFDTKSNPDVALWNSLISGYVNSNENIGALVLFSEML 230
Query: 233 R--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYL 60
+ V+ N T ++L+ G++ +A + HT K + S ++D YS+ G
Sbjct: 231 KNGVQGNSFTLASVLTAISISGILKQAEQ-MHTHACKVGLIGNVIVASAILDAYSKRGSP 289
Query: 59 EEAMELIEQM 30
A L ++
Sbjct: 290 NNACRLFSEL 299
>ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523315|gb|AET03769.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 672
Score = 197 bits (502), Expect = 9e-49
Identities = 91/157 (57%), Positives = 117/157 (74%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ FG+ +T+GL SD IICT+L+D YCKCG V++GR++FD M D VSWN+ML+G
Sbjct: 443 LELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMG 502
Query: 287 YATNGHGNEALILFSKM--KRVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNG+G EAL LF++M V+P+ ITF ILS C HCGLV E R F TM++ + I P
Sbjct: 503 YATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINP 562
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCMVDL++R G EAM LIE+MP++ D +MW
Sbjct: 563 GIEHYSCMVDLFARVGCFGEAMYLIEEMPFQADANMW 599
Score = 68.9 bits (167), Expect = 6e-10
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D I+ +I +YC CG V+ + +F+SM N L+SWNS+LVG N +EAL FS M
Sbjct: 360 DAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMN 419
Query: 233 R--VKPNDITFMAILSGCG-----------------------------------HCGLVA 165
+ VK + +F +++S C CGLV
Sbjct: 420 KLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVE 479
Query: 164 EARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQMPY 24
RK F M +++ ++ M+ Y+ GY EA+ L +M Y
Sbjct: 480 MGRKVFDGMIKTDEVS-----WNTMLMGYATNGYGIEALTLFNEMGY 521
Score = 55.1 bits (131), Expect = 1e-05
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D +AL+ Y G + R++FD+ + V WNS++ GY +NG EAL LF+KM+
Sbjct: 228 DDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMR 287
Query: 233 RVKP-NDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLE 57
R D + +A + L E K H K T S ++D YS+ +
Sbjct: 288 RNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPH 347
Query: 56 EAMELIEQM 30
++ +L ++
Sbjct: 348 DSCKLFHEL 356
>ref|XP_006434327.1| hypothetical protein CICLE_v10000495mg [Citrus clementina]
gi|557536449|gb|ESR47567.1| hypothetical protein
CICLE_v10000495mg [Citrus clementina]
Length = 681
Score = 197 bits (501), Expect = 1e-48
Identities = 94/157 (59%), Positives = 114/157 (72%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ F R IGL SD II T+L+D YCKCGF+ GR LFD+M D +SWNSML+G
Sbjct: 452 LELGEQVFARVTIIGLDSDQIISTSLVDFYCKCGFIKSGRILFDAMIKSDEISWNSMLMG 511
Query: 287 YATNGHGNEALILFSKMKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNG G +AL LF++M+ VKP ITF AILS C HCGLV E +KWF M+ ++ I P
Sbjct: 512 YATNGQGYDALALFNEMRNTGVKPTIITFTAILSACDHCGLVKEGQKWFDAMKWQYHIDP 571
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCMVDL++RAG L EA+ LIEQMP++ D MW
Sbjct: 572 EIEHYSCMVDLFARAGCLNEAVNLIEQMPFEADVGMW 608
Score = 73.9 bits (180), Expect = 2e-11
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D +ALI Y CG ++ RR+FD T+ V WNSM+ GY +N EAL+LF KM+
Sbjct: 237 DDFCLSALISGYANCGKMNDARRVFDRTTDTSSVMWNSMISGYISNNEDTEALLLFHKMR 296
Query: 233 R--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYL 60
R V + T ++LS C G + E K H K + S ++D YS+ G
Sbjct: 297 RNGVLEDASTLASVLSACSSLGFL-EYGKQVHGHACKVGVIDDVIVASALLDTYSKCGMP 355
Query: 59 EEAMELIEQM 30
+A +L ++
Sbjct: 356 SDACKLFSEL 365
Score = 64.3 bits (155), Expect = 2e-08
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGF------------------------- 363
L+ G+Q G +G+ D I+ +AL+D Y KCG
Sbjct: 320 LEYGKQVHGHACKVGVIDDVIVASALLDTYSKCGMPSDACKLFSELKVYDTILLNTMITV 379
Query: 362 ------VDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKR--VKPNDITF 207
++ + +F +M N L+SWNSM+VG + NG EAL LF M + ++ + +
Sbjct: 380 YSSCGRIEDAKHIFRTMPNKSLISWNSMIVGLSQNGSPIEALDLFCNMNKLDLRMDKFSL 439
Query: 206 MAILSGCGHCGLVAEARKWFHTMQ----NKFQITPRFEHYSCMVDLYSRAGYLEEAMELI 39
+++S C + + + F + + QI + +VD Y + G+++ L
Sbjct: 440 ASVISACANISSLELGEQVFARVTIIGLDSDQIIS-----TSLVDFYCKCGFIKSGRILF 494
Query: 38 EQMPYKPDTSMW 3
+ M K D W
Sbjct: 495 DAM-IKSDEISW 505
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/125 (28%), Positives = 62/125 (49%)
Frame = -1
Query: 404 ICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKRVK 225
I L+ +Y +CG LFD M + SWN+M+ G+ GH ++L LF+ M +
Sbjct: 43 IANRLLLMYMRCGNPTDALLLFDEMPLRNCFSWNAMIEGFMKLGHKEKSLQLFNVMP--Q 100
Query: 224 PNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAME 45
ND ++ ++SG G + R F+ M + I ++ M+ Y R G+ EA+
Sbjct: 101 KNDFSWNMLISGFAKAGELKTTRTLFNDMPRRNAIA-----WNSMIHCYVRNGFAREAVR 155
Query: 44 LIEQM 30
L +++
Sbjct: 156 LFKEL 160
>gb|EPS66240.1| hypothetical protein M569_08541 [Genlisea aurea]
Length = 690
Score = 191 bits (486), Expect = 7e-47
Identities = 86/156 (55%), Positives = 118/156 (75%), Gaps = 4/156 (2%)
Frame = -1
Query: 458 GEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNL-DLVSWNSMLVGYA 282
GEQ FGR V IG+ S+ ++ T+LIDLYCKCG V+ GR+LFD + N D VSW++ML+GYA
Sbjct: 464 GEQIFGRAVVIGVTSNQVVATSLIDLYCKCGSVEFGRKLFDRLRNAADSVSWSTMLMGYA 523
Query: 281 TNGHGNEALILFSKMKR---VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPR 111
+NG+G E L LF M R V PN++TF+A+LS C HCGLV E R WF M+N+++I P
Sbjct: 524 SNGYGKETLALFHDMMRLGTVTPNEVTFIAVLSACDHCGLVEEGRHWFSVMRNQYRIDPT 583
Query: 110 FEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EHYSCM+DL SR+G ++EA++LI+++P + D +MW
Sbjct: 584 IEHYSCMIDLMSRSGLIQEAIDLIDEIPLQVDANMW 619
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKM- 237
D ++ +I+++ CG VD +R+F + L+SWNS++VG + NG+ EAL +F M
Sbjct: 378 DTVLLNTMINIFFNCGRVDEAKRVFGGIEFKSLISWNSVIVGLSQNGYPMEALEIFRTMN 437
Query: 236 -KRVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYL 60
+ + + + +S C L + F +T + ++DLY + G +
Sbjct: 438 DNTISMDSFSLASAISACASISLFELGEQIFGRAV-VIGVTSNQVVATSLIDLYCKCGSV 496
Query: 59 EEAMELIEQMPYKPDTSMW 3
E +L +++ D+ W
Sbjct: 497 EFGRKLFDRLRNAADSVSW 515
>ref|XP_004299926.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 682
Score = 191 bits (486), Expect = 7e-47
Identities = 88/156 (56%), Positives = 113/156 (72%), Gaps = 2/156 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ F R IGL D I+ +L+D YCKCG V+ R+LFD M + V WNSML+G
Sbjct: 453 LEYGEQVFARATIIGLDDDEIVSNSLVDFYCKCGLVENARKLFDRMMKSNEVPWNSMLIG 512
Query: 287 YATNGHGNEALILFSKMKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNGHG+EAL LF++M+ VKPN+ITF +LS C HCGLV E RKWF+ M+ + I P
Sbjct: 513 YATNGHGSEALALFNEMRLAGVKPNEITFTGVLSACDHCGLVEEGRKWFYKMKQDYHIDP 572
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSM 6
EHY+CM+DL+SRAG LEEA+ L+E MP++ D S+
Sbjct: 573 YIEHYACMIDLFSRAGCLEEAISLVEAMPFELDASI 608
Score = 66.2 bits (160), Expect = 4e-09
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 34/177 (19%)
Frame = -1
Query: 458 GEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLG------------------------ 351
G+Q R VT G+ D ++ ++L++ Y KCG +D
Sbjct: 191 GKQIHARIVTDGVEFDNVLASSLVNFYGKCGDLDSASQVLNLMNEPDDYSLSAMVSGFAN 250
Query: 350 -------RRLFDSMTNLDLVSWNSMLVGYA-TNGHGNEALILFSKM--KRVKPNDITFMA 201
RR+FD+ +N D+V WNS++ GY +N AL+LF +M V N +T +
Sbjct: 251 GGRMNDARRVFDTKSNPDVVLWNSLISGYVISNETIGGALLLFKEMLINGVHGNSVTLAS 310
Query: 200 ILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQM 30
+L G++ A++ HT+ K + + M+D YS+ G ++A L ++
Sbjct: 311 VLGAISISGILKHAQQ-LHTLACKLGLLGNVIAATAMLDAYSKCGSPDDACRLFSEL 366
Score = 65.5 bits (158), Expect = 7e-09
Identities = 43/140 (30%), Positives = 68/140 (48%)
Frame = -1
Query: 437 TVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEA 258
TVTIG L+ +Y KCG +D LFD M + + SWN++L GY +G A
Sbjct: 40 TVTIG--------NRLLQMYVKCGTMDDALNLFDEMAHRNGFSWNTLLEGYIKSGDQERA 91
Query: 257 LILFSKMKRVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLY 78
L LF M +D T+ ++SG G + AR F M + + ++ M++ Y
Sbjct: 92 LNLFDSM--ACKDDFTWSLVVSGFVKAGKLEVARALFDDMPRRNWVV-----WNSMINGY 144
Query: 77 SRAGYLEEAMELIEQMPYKP 18
++ G +A+ L + + KP
Sbjct: 145 AKHGRSRDALRLFKDLSLKP 164
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/130 (25%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D I+ +I +Y CG ++ +++F +M + ++SWNSM+VG++ NG EA+ LF ++
Sbjct: 370 DTILLNLMITVYSNCGRIEDAKQIFMAMPSKSIISWNSMMVGFSQNGCPIEAVDLFRQIN 429
Query: 233 --RVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYL 60
++ + + ++LS C + + F + + +VD Y + G +
Sbjct: 430 VLDLRMDKFSLASVLSSCASISSLEYGEQVF-ARATIIGLDDDEIVSNSLVDFYCKCGLV 488
Query: 59 EEAMELIEQM 30
E A +L ++M
Sbjct: 489 ENARKLFDRM 498
>gb|EXB42572.1| Putative pentatricopeptide repeat-containing protein [Morus
notabilis]
Length = 951
Score = 185 bits (469), Expect = 6e-45
Identities = 88/156 (56%), Positives = 111/156 (71%), Gaps = 2/156 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ F R V IGL D II +L+D YCKCG V+ G+++FD M D V WN+ML G
Sbjct: 488 LEFGEQIFARAVIIGLEHDEIISNSLLDFYCKCGLVENGQKIFDRMMRCDEVPWNAMLTG 547
Query: 287 YATNGHGNEALILFSKMKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNGHG EAL LF++M + V PN ITF +L C HCGLV E R+WF++M+ + I P
Sbjct: 548 YATNGHGLEALALFNEMLQAGVLPNGITFTGVLCACDHCGLVEEGRRWFYSMKCDYNIDP 607
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSM 6
EHY+ M+DL+SRAG LEEAM +IE+MP+K D SM
Sbjct: 608 SIEHYAGMIDLFSRAGCLEEAMNMIEKMPFKADVSM 643
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D +ALI Y G + R+ F++ +N + W+SM+ GY N AL LF+ M+
Sbjct: 273 DDYSISALIVSYANFGRMSDARKFFNAKSNPSVALWSSMISGYVCNNDNIGALNLFNDMR 332
Query: 233 R--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYL 60
V+ + +T +++LS C G++ A K FH K + +VD YS+ G L
Sbjct: 333 ASGVQGDSLTIVSVLSACSILGILVHA-KQFHAHACKVGMIDNIVVTGALVDAYSKCGSL 391
Query: 59 EEAMELIEQM 30
++A +L ++
Sbjct: 392 DDACKLFSEL 401
Score = 62.0 bits (149), Expect = 8e-08
Identities = 38/131 (29%), Positives = 66/131 (50%)
Frame = -1
Query: 422 LASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFS 243
L SD I L+ +Y +CG LF+ M + + SWN+M+ GY +G +L LF
Sbjct: 73 LGSDVTIGNRLLQMYLRCGSTSDAHALFEEMPHRNCFSWNTMIEGYMKSGDCKRSLELFK 132
Query: 242 KMKRVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGY 63
M + ND ++ ++SG GL+ A+ F M K + ++ M+ Y+R G
Sbjct: 133 IMP--EKNDFSWNTVISGFSKKGLLDTAQSLFDEMPWKSCVA-----WTAMIHGYARNGQ 185
Query: 62 LEEAMELIEQM 30
++A+ L +++
Sbjct: 186 PKDALRLFKRL 196
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Frame = -1
Query: 419 ASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSK 240
A D I+ +I +Y C ++ + +F +M L+SWNSM++G NG +AL LF +
Sbjct: 403 AFDTILLNCMISVYSSCSRIEEAKHIFKTMPRRSLISWNSMMIGLCQNGCPMDALDLFQE 462
Query: 239 MKR--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEH----YSCMVDLY 78
M +K + + + +S C + + F + EH + ++D Y
Sbjct: 463 MNNLGLKMDKFSVASAISACAGISSLEFGEQIFAR-----AVIIGLEHDEIISNSLLDFY 517
Query: 77 SRAGYLEEAMELIEQM 30
+ G +E ++ ++M
Sbjct: 518 CKCGLVENGQKIFDRM 533
>ref|XP_006301154.1| hypothetical protein CARUB_v10021551mg [Capsella rubella]
gi|482569864|gb|EOA34052.1| hypothetical protein
CARUB_v10021551mg [Capsella rubella]
Length = 696
Score = 183 bits (465), Expect = 2e-44
Identities = 86/157 (54%), Positives = 111/157 (70%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ F R +GL SD ++ ++LIDLYCKCGFV+ GRR+FD+M D V WNSM+ G
Sbjct: 467 LELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISG 526
Query: 287 YATNGHGNEALILFSKMK--RVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNG G EA+ LF KM +KP ITFM +L+ C +CGLV E R +F M+ P
Sbjct: 527 YATNGRGFEAIDLFKKMNVAGIKPTRITFMVVLTACNYCGLVEEGRNFFEAMKLDNGFVP 586
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EH+SCMVDL +RAGY+EEA++L+E+MP+ D SMW
Sbjct: 587 DKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMW 623
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Frame = -1
Query: 398 TALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKRVKPN 219
+ALI Y CG VD R +FD +N ++ WNSM+ GY N EAL+LF++M+
Sbjct: 258 SALISGYANCGRVDESRGIFDRKSNRCVILWNSMISGYVANDMKFEALVLFNEMRNETQE 317
Query: 218 DI-TFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMEL 42
D T A+++ C G + E K H KF + S ++D+YS+ G EA +L
Sbjct: 318 DSRTLAAVINACIGLGFL-ETGKQMHCHACKFGLIEDIVVASTLLDMYSKCGNPMEACKL 376
Query: 41 IEQM 30
++
Sbjct: 377 FSEV 380
Score = 67.0 bits (162), Expect = 2e-09
Identities = 39/136 (28%), Positives = 67/136 (49%)
Frame = -1
Query: 422 LASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFS 243
+ S I+ L+ +Y +CG + R LFD M + SWN+M+ GY +G AL F
Sbjct: 59 IGSIVIVANHLLQIYSRCGNMGTARDLFDEMPERNYFSWNTMIEGYMNSGEKGTALRFFD 118
Query: 242 KMKRVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGY 63
M + + ++ ++SG G + AR+ F+ M K +T + ++ Y GY
Sbjct: 119 MMP--ERDGYSWNLVVSGFAKAGELGVARRLFNAMPEKDAVT-----VNSLLHGYILDGY 171
Query: 62 LEEAMELIEQMPYKPD 15
EEA+ L +++ + D
Sbjct: 172 AEEALRLFKELKFSAD 187
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D I+ +I +Y CG D +R+F+ + N L+SWNSM+ G++ NG E L F +M
Sbjct: 384 DTILLNNMIKVYFSCGRFDDAKRVFERIENKSLISWNSMINGFSQNGCSVETLEYFRRMH 443
Query: 233 R--VKPNDITFMAILSGCG-----HCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYS 75
+ + ++++ +++S C G AR + + ++ S ++DLY
Sbjct: 444 KLDLPTDEVSLSSVISACATISSLELGEQVFARATIVGLDSDQVVS------SSLIDLYC 497
Query: 74 RAGYLEEAMELIEQMPYKPDTSMW 3
+ G++E + + M K D W
Sbjct: 498 KCGFVEHGRRVFDTM-VKSDEVPW 520
>ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein
[Arabidopsis thaliana] gi|332197804|gb|AEE35925.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 695
Score = 183 bits (464), Expect = 2e-44
Identities = 86/157 (54%), Positives = 111/157 (70%), Gaps = 2/157 (1%)
Frame = -1
Query: 467 LQRGEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVG 288
L+ GEQ F R +GL SD ++ ++LIDLYCKCGFV+ GRR+FD+M D V WNSM+ G
Sbjct: 466 LELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISG 525
Query: 287 YATNGHGNEALILFSKMK--RVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITP 114
YATNG G EA+ LF KM ++P ITFM +L+ C +CGLV E RK F +M+ P
Sbjct: 526 YATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVP 585
Query: 113 RFEHYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
EH+SCMVDL +RAGY+EEA+ L+E+MP+ D SMW
Sbjct: 586 DKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMW 622
Score = 70.5 bits (171), Expect = 2e-10
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = -1
Query: 398 TALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK-RVKP 222
+ALI Y CG V+ R LFD +N ++ WNSM+ GY N EAL+LF++M+ +
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE 316
Query: 221 NDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMEL 42
+ T A+++ C G + E K H KF + S ++D+YS+ G EA +L
Sbjct: 317 DSRTLAAVINACIGLGFL-ETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 41 IEQM 30
++
Sbjct: 376 FSEV 379
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/136 (27%), Positives = 70/136 (51%)
Frame = -1
Query: 422 LASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFS 243
L+S I+ L+ +Y + G + + R LFD M + + SWN+M+ GY +G +L F
Sbjct: 58 LSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFD 117
Query: 242 KMKRVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGY 63
M + + ++ ++SG G ++ AR+ F+ M K +T + ++ Y GY
Sbjct: 118 MMP--ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVT-----LNSLLHGYILNGY 170
Query: 62 LEEAMELIEQMPYKPD 15
EEA+ L +++ + D
Sbjct: 171 AEEALRLFKELNFSAD 186
Score = 61.6 bits (148), Expect = 1e-07
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D I+ ++I +Y CG +D +R+F+ + N L+SWNSM G++ NG E L F +M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 233 R--VKPNDITFMAILSGCG-----HCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYS 75
+ + ++++ +++S C G AR + + ++ S ++DLY
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVS------SSLIDLYC 496
Query: 74 RAGYLEEAMELIEQMPYKPDTSMW 3
+ G++E + + M K D W
Sbjct: 497 KCGFVEHGRRVFDTM-VKSDEVPW 519
Score = 57.0 bits (136), Expect = 3e-06
Identities = 37/125 (29%), Positives = 63/125 (50%)
Frame = -1
Query: 380 YCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKRVKPNDITFMA 201
+ K G + + RRLF++M D+V+ NS+L GY NG+ EAL LF ++ + IT
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL-NFSADAITLTT 192
Query: 200 ILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQMPYK 21
+L C + + K H + + S +V++Y++ G L A ++EQ+
Sbjct: 193 VLKACAELEAL-KCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP 251
Query: 20 PDTSM 6
D S+
Sbjct: 252 DDHSL 256
>ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297333507|gb|EFH63925.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 675
Score = 181 bits (458), Expect = 1e-43
Identities = 85/154 (55%), Positives = 108/154 (70%), Gaps = 2/154 (1%)
Frame = -1
Query: 458 GEQCFGRTVTIGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYAT 279
GEQ F R +GL SD I+ ++LIDLYCKCG V+ GRR+FD+M D V WNSM+ GYAT
Sbjct: 449 GEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYAT 508
Query: 278 NGHGNEALILFSKMK--RVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFE 105
NGHG EA+ LF KM ++P ITFM +L+ C +CGLV E R F M+ P E
Sbjct: 509 NGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFVPDKE 568
Query: 104 HYSCMVDLYSRAGYLEEAMELIEQMPYKPDTSMW 3
H+SCMVDL +RAGY+EEA++L+E+MP+ D SMW
Sbjct: 569 HFSCMVDLLARAGYVEEAIDLVEEMPFDADASMW 602
Score = 71.2 bits (173), Expect = 1e-10
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Frame = -1
Query: 428 IGLASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALIL 249
IG D + T LI Y CG V+ RRLFD +N ++ WNSM+ GY N EAL+L
Sbjct: 228 IGEPDDHSLST-LISGYANCGRVNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVL 286
Query: 248 FSKMKRVKPNDI-TFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSR 72
F++M+ D T A+++ C G + E K H KF + S ++D+YS+
Sbjct: 287 FNEMRNETWEDSRTLAAVINACIGLGFL-ETGKQMHCHACKFGLVDDIVVASTLLDMYSK 345
Query: 71 AGYLEEAMELIEQM 30
G EA +L ++
Sbjct: 346 CGSPMEACKLFSEV 359
Score = 63.5 bits (153), Expect = 3e-08
Identities = 37/136 (27%), Positives = 68/136 (50%)
Frame = -1
Query: 422 LASDPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFS 243
++S I+ L+ +Y + G + + R LFD M + SWN+M+ GY +G +L F
Sbjct: 38 ISSIVIVANHLLQIYSRSGKMGIARNLFDEMPERNYFSWNTMIEGYMNSGDKGTSLRFFD 97
Query: 242 KMKRVKPNDITFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGY 63
M + + ++ ++SG G ++ AR+ F M K +T + ++ Y GY
Sbjct: 98 MMP--ERDGYSWNVVISGFAKAGELSVARRLFDAMPEKDVVT-----LNSLLHGYILNGY 150
Query: 62 LEEAMELIEQMPYKPD 15
EEA+ L +++ + D
Sbjct: 151 SEEALRLFKELKFSAD 166
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Frame = -1
Query: 413 DPIICTALIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMK 234
D I+ ++I +Y CG +D +R+F+ + N L+SWNSM G++ NG E L FS+M
Sbjct: 363 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMH 422
Query: 233 R--VKPNDITFMAILSGCGHCGLVAEARKWFHTMQ----NKFQITPRFEHYSCMVDLYSR 72
+ + ++++ +++S C + + F + QI S ++DLY +
Sbjct: 423 KLDLPTDEVSLSSVISACASISSLGLGEQVFARATIVGLDSDQIVS-----SSLIDLYCK 477
Query: 71 AGYLEEAMELIEQMPYKPDTSMW 3
G +E + + M K D W
Sbjct: 478 CGSVENGRRVFDTM-VKSDEVPW 499
Score = 61.2 bits (147), Expect = 1e-07
Identities = 40/129 (31%), Positives = 65/129 (50%)
Frame = -1
Query: 392 LIDLYCKCGFVDLGRRLFDSMTNLDLVSWNSMLVGYATNGHGNEALILFSKMKRVKPNDI 213
+I + K G + + RRLFD+M D+V+ NS+L GY NG+ EAL LF ++K + I
Sbjct: 110 VISGFAKAGELSVARRLFDAMPEKDVVTLNSLLHGYILNGYSEEALRLFKELK-FSADAI 168
Query: 212 TFMAILSGCGHCGLVAEARKWFHTMQNKFQITPRFEHYSCMVDLYSRAGYLEEAMELIEQ 33
T +L C + K H + + S +V++Y++ G L A ++EQ
Sbjct: 169 TLTTVLKACAELEALKRG-KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ 227
Query: 32 MPYKPDTSM 6
+ D S+
Sbjct: 228 IGEPDDHSL 236