BLASTX nr result
ID: Rheum21_contig00033364
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00033364
(296 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35069.3| unnamed protein product [Vitis vinifera] 129 5e-28
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s... 129 5e-28
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put... 129 5e-28
ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III s... 127 1e-27
gb|EXB83245.1| DNA-directed RNA polymerase III subunit RPC2 [Mor... 126 3e-27
gb|EOY19615.1| DNA-directed RNA polymerase isoform 7 [Theobroma ... 126 3e-27
gb|EOY19614.1| DNA-directed RNA polymerase isoform 6 [Theobroma ... 126 3e-27
gb|EOY19612.1| DNA-directed RNA polymerase isoform 4 [Theobroma ... 126 3e-27
gb|EOY19610.1| DNA-directed RNA polymerase isoform 2 [Theobroma ... 126 3e-27
gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 126 3e-27
ref|XP_006583558.1| PREDICTED: DNA-directed RNA polymerase III s... 125 6e-27
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s... 125 6e-27
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s... 125 6e-27
ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, par... 125 6e-27
ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, par... 125 6e-27
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s... 125 6e-27
ref|XP_006572933.1| PREDICTED: DNA-directed RNA polymerase III s... 125 8e-27
ref|XP_006572932.1| PREDICTED: DNA-directed RNA polymerase III s... 125 8e-27
gb|ESW24958.1| hypothetical protein PHAVU_004G175000g [Phaseolus... 125 8e-27
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s... 125 8e-27
>emb|CBI35069.3| unnamed protein product [Vitis vinifera]
Length = 1309
Score = 129 bits (323), Expect = 5e-28
Identities = 64/97 (65%), Positives = 73/97 (75%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLY KD++ELARLGECPLDPGGYFVVKGTEKVIL+QEQLS NRII D
Sbjct: 150 GRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDT 209
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ V+EKEKI++Q+NQF
Sbjct: 210 DKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQF 246
>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
vinifera]
Length = 1142
Score = 129 bits (323), Expect = 5e-28
Identities = 64/97 (65%), Positives = 73/97 (75%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLY KD++ELARLGECPLDPGGYFVVKGTEKVIL+QEQLS NRII D
Sbjct: 132 GRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDT 191
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ V+EKEKI++Q+NQF
Sbjct: 192 DKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQF 228
>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus
communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA
polymerase III subunit, putative [Ricinus communis]
Length = 1139
Score = 129 bits (323), Expect = 5e-28
Identities = 63/97 (64%), Positives = 73/97 (75%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS SCVLYGKD++ELARLGECPLDPGGYFV+KGTEKVIL+QEQLS NRII D
Sbjct: 148 GRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDT 207
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ +EKEK+Y+ +NQF
Sbjct: 208 DKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQF 244
>ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
isoform X1 [Setaria italica]
Length = 1154
Score = 127 bits (320), Expect = 1e-27
Identities = 61/97 (62%), Positives = 73/97 (75%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS +C+L+GKD++ELARLGECPLDPGGYF+VKGTEKVIL+QEQLS NRII D
Sbjct: 144 GYMPIMLRSYACILHGKDEAELARLGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDT 203
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
D KG +I L+KEKIY+Q+NQF
Sbjct: 204 DSKGRVIASVTSSTHEIKSKTVITLDKEKIYLQLNQF 240
>gb|EXB83245.1| DNA-directed RNA polymerase III subunit RPC2 [Morus notabilis]
Length = 786
Score = 126 bits (317), Expect = 3e-27
Identities = 60/97 (61%), Positives = 72/97 (74%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLYGKD++ELA+LGECPLDPGGYF+VKGTEKV+L+QEQLS NRII D
Sbjct: 193 GRMPIMLRSCCCVLYGKDEAELAKLGECPLDPGGYFIVKGTEKVLLIQEQLSKNRIIIDT 252
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ +EKEK+Y+ +NQF
Sbjct: 253 DKKGNINASVTSSSEAIKSKTVIQMEKEKLYLMLNQF 289
>gb|EOY19615.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
Length = 1082
Score = 126 bits (317), Expect = 3e-27
Identities = 62/97 (63%), Positives = 71/97 (73%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLYGKD++ELARLGECPLDPGGYFV+KG EKVIL+QEQLS NRII D
Sbjct: 51 GRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDA 110
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ +EKEKIY+ +NQF
Sbjct: 111 DKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQF 147
>gb|EOY19614.1| DNA-directed RNA polymerase isoform 6 [Theobroma cacao]
Length = 1034
Score = 126 bits (317), Expect = 3e-27
Identities = 62/97 (63%), Positives = 71/97 (73%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLYGKD++ELARLGECPLDPGGYFV+KG EKVIL+QEQLS NRII D
Sbjct: 150 GRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDA 209
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ +EKEKIY+ +NQF
Sbjct: 210 DKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQF 246
>gb|EOY19612.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao]
Length = 1034
Score = 126 bits (317), Expect = 3e-27
Identities = 62/97 (63%), Positives = 71/97 (73%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLYGKD++ELARLGECPLDPGGYFV+KG EKVIL+QEQLS NRII D
Sbjct: 150 GRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDA 209
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ +EKEKIY+ +NQF
Sbjct: 210 DKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQF 246
>gb|EOY19610.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
Length = 1011
Score = 126 bits (317), Expect = 3e-27
Identities = 62/97 (63%), Positives = 71/97 (73%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLYGKD++ELARLGECPLDPGGYFV+KG EKVIL+QEQLS NRII D
Sbjct: 150 GRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDA 209
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ +EKEKIY+ +NQF
Sbjct: 210 DKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQF 246
>gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 1158
Score = 126 bits (317), Expect = 3e-27
Identities = 62/97 (63%), Positives = 71/97 (73%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLYGKD++ELARLGECPLDPGGYFV+KG EKVIL+QEQLS NRII D
Sbjct: 150 GRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDA 209
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ +EKEKIY+ +NQF
Sbjct: 210 DKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQF 246
>ref|XP_006583558.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
isoform X2 [Glycine max]
Length = 1021
Score = 125 bits (314), Expect = 6e-27
Identities = 59/97 (60%), Positives = 74/97 (76%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVL+G+D++ELA+LGECPLDPGGYFV+KGTEKVIL+QEQLS NRII D
Sbjct: 157 GRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDT 216
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ V+EKEK+++Q+N+F
Sbjct: 217 DKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKF 253
>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
isoform X1 [Glycine max]
Length = 1165
Score = 125 bits (314), Expect = 6e-27
Identities = 59/97 (60%), Positives = 74/97 (76%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVL+G+D++ELA+LGECPLDPGGYFV+KGTEKVIL+QEQLS NRII D
Sbjct: 157 GRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDT 216
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ V+EKEK+++Q+N+F
Sbjct: 217 DKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKF 253
>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
isoform X1 [Solanum tuberosum]
gi|565393087|ref|XP_006362215.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC2-like isoform X2 [Solanum
tuberosum]
Length = 1153
Score = 125 bits (314), Expect = 6e-27
Identities = 60/98 (61%), Positives = 72/98 (73%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLYGKD+ ELARLGECPLDPGGYFV+KGTEKVIL+QEQLS NRII D
Sbjct: 144 GRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDT 203
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQFQ 296
DKKG++ +EKEK+Y+++N F+
Sbjct: 204 DKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFK 241
>ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, partial [Populus
trichocarpa] gi|550321670|gb|EEF05483.2| hypothetical
protein POPTR_0015s005302g, partial [Populus
trichocarpa]
Length = 1034
Score = 125 bits (314), Expect = 6e-27
Identities = 62/97 (63%), Positives = 73/97 (75%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLYGK+++ELARLGECPLDPGGYFVVKGTEKVIL+QEQLS NRII D
Sbjct: 146 GRMPIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDN 205
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ ++EKEK+Y+ +NQF
Sbjct: 206 DKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQF 242
>ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, partial [Populus
trichocarpa] gi|550321669|gb|EEF05487.2| hypothetical
protein POPTR_0015s005302g, partial [Populus
trichocarpa]
Length = 1035
Score = 125 bits (314), Expect = 6e-27
Identities = 62/97 (63%), Positives = 73/97 (75%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLYGK+++ELARLGECPLDPGGYFVVKGTEKVIL+QEQLS NRII D
Sbjct: 146 GRMPIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDN 205
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ ++EKEK+Y+ +NQF
Sbjct: 206 DKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQF 242
>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
[Solanum lycopersicum]
Length = 1183
Score = 125 bits (314), Expect = 6e-27
Identities = 60/98 (61%), Positives = 72/98 (73%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLYGKD+ ELARLGECPLDPGGYFV+KGTEKVIL+QEQLS NRII D
Sbjct: 174 GRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDT 233
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQFQ 296
DKKG++ +EKEK+Y+++N F+
Sbjct: 234 DKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFK 271
>ref|XP_006572933.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
isoform X4 [Glycine max]
Length = 1036
Score = 125 bits (313), Expect = 8e-27
Identities = 59/97 (60%), Positives = 73/97 (75%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVL+GKD++ELA+LGECPLDPGGYFV+KGTEKVIL+QEQLS NRII D
Sbjct: 28 GRMPIMLRSCCCVLHGKDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDT 87
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ V+E EK+++Q+N+F
Sbjct: 88 DKKGNITASVTSSTEKIKTKTVIVMENEKLWLQLNKF 124
>ref|XP_006572932.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
isoform X3 [Glycine max]
Length = 1085
Score = 125 bits (313), Expect = 8e-27
Identities = 59/97 (60%), Positives = 73/97 (75%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVL+GKD++ELA+LGECPLDPGGYFV+KGTEKVIL+QEQLS NRII D
Sbjct: 158 GRMPIMLRSCCCVLHGKDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDT 217
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ V+E EK+++Q+N+F
Sbjct: 218 DKKGNITASVTSSTEKIKTKTVIVMENEKLWLQLNKF 254
>gb|ESW24958.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
Length = 1161
Score = 125 bits (313), Expect = 8e-27
Identities = 60/97 (61%), Positives = 71/97 (73%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVLYG+D +ELA+LGECPLDPGGYFVVKGTEKVIL+QEQLS NRII D
Sbjct: 153 GRMPIMLRSCCCVLYGRDQAELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDT 212
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ V+E EK+++ +NQF
Sbjct: 213 DKKGNIAASVTSSTEKIKTKTIIVMENEKLWLHLNQF 249
>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
isoform X1 [Glycine max]
Length = 1166
Score = 125 bits (313), Expect = 8e-27
Identities = 59/97 (60%), Positives = 73/97 (75%)
Frame = +3
Query: 3 GSMPVMLRS*SCVLYGKDDSELARLGECPLDPGGYFVVKGTEKVILMQEQLSNNRIITDV 182
G MP+MLRS CVL+GKD++ELA+LGECPLDPGGYFV+KGTEKVIL+QEQLS NRII D
Sbjct: 158 GRMPIMLRSCCCVLHGKDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDT 217
Query: 183 DKKGNLIXXXXXXXXXXXXXXXFVLEKEKIYVQINQF 293
DKKGN+ V+E EK+++Q+N+F
Sbjct: 218 DKKGNITASVTSSTEKIKTKTVIVMENEKLWLQLNKF 254