BLASTX nr result

ID: Rheum21_contig00033266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00033266
         (259 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006394582.1| hypothetical protein EUTSA_v10004843mg [Eutr...    57   2e-06
ref|XP_004148570.1| PREDICTED: ATP-dependent Clp protease proteo...    57   2e-06
ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteo...    57   2e-06
gb|EOX99127.1| Nuclear-encoded CLP protease P7 [Theobroma cacao]       55   9e-06
ref|NP_568427.1| nuclear-encoded CLP protease P7 [Arabidopsis th...    55   9e-06

>ref|XP_006394582.1| hypothetical protein EUTSA_v10004843mg [Eutrema salsugineum]
           gi|557091221|gb|ESQ31868.1| hypothetical protein
           EUTSA_v10004843mg [Eutrema salsugineum]
          Length = 240

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/53 (64%), Positives = 36/53 (67%)
 Frame = +3

Query: 99  MRSLAFSAIARSSSALANLTGGSFTAPHRRSYSLIPMVIEHSSRGERAYDIFS 257
           MR L   A   S+ +L   T    TA  RRSYSLIPMVIEHSSRGERAYDIFS
Sbjct: 2   MRGLVSGAKRLSAPSLMATT----TASTRRSYSLIPMVIEHSSRGERAYDIFS 50


>ref|XP_004148570.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Cucumis sativus]
           gi|449522109|ref|XP_004168070.1| PREDICTED:
           ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Cucumis sativus]
          Length = 243

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +3

Query: 102 RSLAFSAIARSSSALANLTGGSFTAPHRRSYSLIPMVIEHSSRGERAYDIFS 257
           RSLA +++  ++ + A+  G +     RR YSL+PMVIEH+SRGERAYDIFS
Sbjct: 4   RSLASTSMLLAAKSTASACGRTAMRDFRRPYSLVPMVIEHTSRGERAYDIFS 55


>ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Brachypodium distachyon]
          Length = 300

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
 Frame = +3

Query: 3   TTEGQKHLLLP-PRYSPQ*FHPSSRHFPSIAVTM-RSLAFSAIARSSSALANLTGGSFTA 176
           T   + HL  P P+  P   +P+    PS A  M R LA +A  R+  + +   G  +TA
Sbjct: 16  TIPSRSHLAAPGPKPKPNPLNPAPN--PSAAAAMLRRLASAAAPRAFFSSSPPAG--YTA 71

Query: 177 PHRRSYSLIPMVIEHSSRGERAYDIFS 257
             RR Y L+PMVIEH+SRGERAYDIFS
Sbjct: 72  --RREYGLVPMVIEHTSRGERAYDIFS 96


>gb|EOX99127.1| Nuclear-encoded CLP protease P7 [Theobroma cacao]
          Length = 247

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 27/46 (58%), Positives = 34/46 (73%)
 Frame = +3

Query: 120 AIARSSSALANLTGGSFTAPHRRSYSLIPMVIEHSSRGERAYDIFS 257
           A+  S+  L + T  + +  + R+YSLIPMVIEHSSRGERAYDIFS
Sbjct: 3   ALISSTKRLISTTTTALSRSNHRNYSLIPMVIEHSSRGERAYDIFS 48


>ref|NP_568427.1| nuclear-encoded CLP protease P7 [Arabidopsis thaliana]
           gi|75309225|sp|Q9FN42.1|CLPP2_ARATH RecName:
           Full=ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial; AltName: Full=Endopeptidase ClpP2;
           AltName: Full=nClpP7; Flags: Precursor
           gi|9759372|dbj|BAB09831.1| ATP-dependent protease
           proteolytic subunit ClpP-like protein [Arabidopsis
           thaliana] gi|26452073|dbj|BAC43126.1| putative
           ATP-dependent protease proteolytic subunit ClpP
           [Arabidopsis thaliana] gi|28950803|gb|AAO63325.1|
           At5g23140 [Arabidopsis thaliana]
           gi|332005743|gb|AED93126.1| nuclear-encoded CLP protease
           P7 [Arabidopsis thaliana]
          Length = 241

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 33/53 (62%), Positives = 35/53 (66%)
 Frame = +3

Query: 99  MRSLAFSAIARSSSALANLTGGSFTAPHRRSYSLIPMVIEHSSRGERAYDIFS 257
           MR L   A   SS+  +  T     A  RRSYSLIPMVIEHSSRGERAYDIFS
Sbjct: 2   MRGLVSGAKMLSSTPSSMATS---IATGRRSYSLIPMVIEHSSRGERAYDIFS 51


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