BLASTX nr result
ID: Rheum21_contig00033016
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00033016
(213 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF87890.1|AC012561_23 Similar tp transcription factors [Arab... 89 8e-16
ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis ... 89 8e-16
ref|NP_564568.1| SNF2 and helicase domain-containing protein [Ar... 89 8e-16
gb|AAD50036.1|AC007980_1 Similar to transcription factors [Arabi... 89 8e-16
ref|XP_006306192.1| hypothetical protein CARUB_v10011822mg [Caps... 88 1e-15
ref|NP_001053966.1| Os04g0629300 [Oryza sativa Japonica Group] g... 88 1e-15
emb|CAH68165.1| H0323C08.5 [Oryza sativa Indica Group] gi|116312... 88 1e-15
gb|EMS47838.1| Uncharacterized ATP-dependent helicase C23E6.02 [... 88 1e-15
gb|AFW59554.1| putative SNF2-domain/RING finger domain/helicase ... 87 2e-15
ref|XP_004961680.1| PREDICTED: uncharacterized ATP-dependent hel... 87 3e-15
gb|EXB96365.1| SMARCA3-like protein 2 [Morus notabilis] 86 4e-15
ref|XP_006393155.1| hypothetical protein EUTSA_v10011211mg [Eutr... 86 4e-15
ref|XP_006652864.1| PREDICTED: uncharacterized ATP-dependent hel... 86 5e-15
gb|EPS68824.1| chromatin remodeling complex subunit, partial [Ge... 86 5e-15
ref|XP_006345299.1| PREDICTED: uncharacterized ATP-dependent hel... 86 7e-15
ref|XP_006345296.1| PREDICTED: uncharacterized ATP-dependent hel... 86 7e-15
ref|XP_004976907.1| PREDICTED: uncharacterized ATP-dependent hel... 86 7e-15
ref|XP_004231724.1| PREDICTED: uncharacterized ATP-dependent hel... 86 7e-15
ref|XP_002448580.1| hypothetical protein SORBIDRAFT_06g029476 [S... 85 9e-15
ref|XP_004164769.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 84 1e-14
>gb|AAF87890.1|AC012561_23 Similar tp transcription factors [Arabidopsis thaliana]
Length = 1062
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/46 (86%), Positives = 41/46 (89%)
Frame = +2
Query: 74 DGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
D GTLAKV W RVVLDEAQ IKNHRTQ ARACCGLRAK+RWCLSGT
Sbjct: 543 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGT 588
>ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337416|gb|EFH67833.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 980
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/46 (86%), Positives = 41/46 (89%)
Frame = +2
Query: 74 DGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
D GTLAKV W RVVLDEAQ IKNHRTQ ARACCGLRAK+RWCLSGT
Sbjct: 462 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGT 507
>ref|NP_564568.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
gi|14532630|gb|AAK64043.1| putative DNA-binding protein
[Arabidopsis thaliana] gi|23296945|gb|AAN13207.1|
putative DNA-binding protein [Arabidopsis thaliana]
gi|332194424|gb|AEE32545.1| SNF2 and helicase
domain-containing protein [Arabidopsis thaliana]
Length = 981
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/46 (86%), Positives = 41/46 (89%)
Frame = +2
Query: 74 DGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
D GTLAKV W RVVLDEAQ IKNHRTQ ARACCGLRAK+RWCLSGT
Sbjct: 462 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGT 507
>gb|AAD50036.1|AC007980_1 Similar to transcription factors [Arabidopsis thaliana]
Length = 953
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/46 (86%), Positives = 41/46 (89%)
Frame = +2
Query: 74 DGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
D GTLAKV W RVVLDEAQ IKNHRTQ ARACCGLRAK+RWCLSGT
Sbjct: 543 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGT 588
>ref|XP_006306192.1| hypothetical protein CARUB_v10011822mg [Capsella rubella]
gi|482574903|gb|EOA39090.1| hypothetical protein
CARUB_v10011822mg [Capsella rubella]
Length = 997
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = +2
Query: 62 LFNSDGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
L + D GTLA+V W RVVLDEAQ IKNHRTQ ARACCGLRAK+RWCLSGT
Sbjct: 480 LSDPDSGTLARVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGT 529
>ref|NP_001053966.1| Os04g0629300 [Oryza sativa Japonica Group]
gi|39546244|emb|CAE04253.3| OSJNBa0089N06.14 [Oryza
sativa Japonica Group] gi|113565537|dbj|BAF15880.1|
Os04g0629300 [Oryza sativa Japonica Group]
gi|125549851|gb|EAY95673.1| hypothetical protein
OsI_17539 [Oryza sativa Indica Group]
gi|125591732|gb|EAZ32082.1| hypothetical protein
OsJ_16271 [Oryza sativa Japonica Group]
gi|215717116|dbj|BAG95479.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 1051
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +2
Query: 74 DGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
DGG LA+VRW RVVLDEAQ IKNH TQ ARACCGLRAK+RWCLSGT
Sbjct: 556 DGGPLARVRWFRVVLDEAQTIKNHNTQVARACCGLRAKRRWCLSGT 601
>emb|CAH68165.1| H0323C08.5 [Oryza sativa Indica Group] gi|116312065|emb|CAJ86429.1|
H0303G06.18 [Oryza sativa Indica Group]
Length = 1051
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +2
Query: 74 DGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
DGG LA+VRW RVVLDEAQ IKNH TQ ARACCGLRAK+RWCLSGT
Sbjct: 556 DGGPLARVRWFRVVLDEAQTIKNHNTQVARACCGLRAKRRWCLSGT 601
>gb|EMS47838.1| Uncharacterized ATP-dependent helicase C23E6.02 [Triticum urartu]
Length = 1208
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = +2
Query: 74 DGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
DGG LA+VRW RVVLDEAQ IKNHRT++ARACCGL+AK+RWCLSGT
Sbjct: 504 DGGPLARVRWFRVVLDEAQTIKNHRTKSARACCGLKAKRRWCLSGT 549
>gb|AFW59554.1| putative SNF2-domain/RING finger domain/helicase domain protein
[Zea mays]
Length = 948
Score = 87.4 bits (215), Expect = 2e-15
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +2
Query: 68 NSDGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
NS+GG LA+VRW RVVLDEAQ IKN+RTQ +RACCGLRA++RWCLSGT
Sbjct: 451 NSEGGPLARVRWFRVVLDEAQTIKNYRTQVSRACCGLRAQRRWCLSGT 498
>ref|XP_004961680.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
[Setaria italica]
Length = 1049
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +2
Query: 65 FNSDGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
F+ D G LA+VRW RVVLDEAQ IKNHRT ARACCGLRAK+RWCLSGT
Sbjct: 553 FDLDSGPLARVRWFRVVLDEAQTIKNHRTIVARACCGLRAKRRWCLSGT 601
>gb|EXB96365.1| SMARCA3-like protein 2 [Morus notabilis]
Length = 753
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +2
Query: 56 SGLFNSDGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
S + + D GTLA+V WLRV+LDEAQ IKNHRTQ ARACC LRAK+RWCLSGT
Sbjct: 485 SSVVDYDCGTLARVGWLRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGT 536
>ref|XP_006393155.1| hypothetical protein EUTSA_v10011211mg [Eutrema salsugineum]
gi|557089733|gb|ESQ30441.1| hypothetical protein
EUTSA_v10011211mg [Eutrema salsugineum]
Length = 964
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +2
Query: 74 DGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
D GTLA+V W RVVLDEAQ IKNHRTQ ARACCGLRAK+RWCLSGT
Sbjct: 456 DCGTLARVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGT 501
>ref|XP_006652864.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
[Oryza brachyantha]
Length = 1066
Score = 85.9 bits (211), Expect = 5e-15
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = +2
Query: 74 DGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
DGG LA+VRW RVVLDEAQ IKN+RTQ ARACCGL AK+RWCLSGT
Sbjct: 570 DGGPLARVRWFRVVLDEAQTIKNYRTQVARACCGLEAKRRWCLSGT 615
>gb|EPS68824.1| chromatin remodeling complex subunit, partial [Genlisea aurea]
Length = 570
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/49 (75%), Positives = 44/49 (89%)
Frame = +2
Query: 65 FNSDGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
F+S GTLA+V+W RV+LDE+Q+IKNHRTQ ARACC LRAK+RWCLSGT
Sbjct: 460 FDSSCGTLARVKWSRVILDESQMIKNHRTQVARACCSLRAKRRWCLSGT 508
>ref|XP_006345299.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
isoform X4 [Solanum tuberosum]
Length = 959
Score = 85.5 bits (210), Expect = 7e-15
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +2
Query: 65 FNSDGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
F+ + GTLAKV W RV+LDEAQ IKNHRTQ ARACC LRAK+RWCLSGT
Sbjct: 450 FDPNCGTLAKVSWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGT 498
>ref|XP_006345296.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
isoform X1 [Solanum tuberosum]
gi|565356898|ref|XP_006345297.1| PREDICTED:
uncharacterized ATP-dependent helicase C23E6.02-like
isoform X2 [Solanum tuberosum]
gi|565356900|ref|XP_006345298.1| PREDICTED:
uncharacterized ATP-dependent helicase C23E6.02-like
isoform X3 [Solanum tuberosum]
Length = 997
Score = 85.5 bits (210), Expect = 7e-15
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +2
Query: 65 FNSDGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
F+ + GTLAKV W RV+LDEAQ IKNHRTQ ARACC LRAK+RWCLSGT
Sbjct: 488 FDPNCGTLAKVSWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGT 536
>ref|XP_004976907.1| PREDICTED: uncharacterized ATP-dependent helicase C17A2.12-like
[Setaria italica]
Length = 1033
Score = 85.5 bits (210), Expect = 7e-15
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +2
Query: 68 NSDGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
NSDGG LA+V+W RVVLDEAQ IKN+RTQ +RACCGL A++RWCLSGT
Sbjct: 541 NSDGGPLARVKWFRVVLDEAQTIKNYRTQVSRACCGLMAERRWCLSGT 588
>ref|XP_004231724.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
[Solanum lycopersicum]
Length = 997
Score = 85.5 bits (210), Expect = 7e-15
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +2
Query: 65 FNSDGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
F+ + GTLAKV W RV+LDEAQ IKNHRTQ ARACC LRAK+RWCLSGT
Sbjct: 488 FDPNCGTLAKVSWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGT 536
>ref|XP_002448580.1| hypothetical protein SORBIDRAFT_06g029476 [Sorghum bicolor]
gi|241939763|gb|EES12908.1| hypothetical protein
SORBIDRAFT_06g029476 [Sorghum bicolor]
Length = 864
Score = 85.1 bits (209), Expect = 9e-15
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +2
Query: 68 NSDGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
N +GG LA+VRW RVVLDEAQ IKN+RTQ +RACCGLRA++RWCLSGT
Sbjct: 369 NLEGGPLARVRWFRVVLDEAQTIKNYRTQVSRACCGLRAERRWCLSGT 416
>ref|XP_004164769.1| PREDICTED: LOW QUALITY PROTEIN: transcription termination factor
2-like, partial [Cucumis sativus]
Length = 411
Score = 84.3 bits (207), Expect = 1e-14
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = +2
Query: 65 FNSDGGTLAKVRWLRVVLDEAQIIKNHRTQAARACCGLRAKKRWCLSGT 211
F D G LA+V W RV+LDEAQ IKNHRTQ ARACC LRAK+RWCLSGT
Sbjct: 260 FECDSGPLARVGWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGT 308