BLASTX nr result
ID: Rheum21_contig00032874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00032874
(278 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 91 2e-16
ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein A... 74 2e-11
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 72 1e-10
gb|EMJ28392.1| hypothetical protein PRUPE_ppa019361mg, partial [... 69 5e-10
gb|EMJ12193.1| hypothetical protein PRUPE_ppa021032mg [Prunus pe... 69 5e-10
gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [... 67 2e-09
ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein A... 67 3e-09
gb|EEC81099.1| hypothetical protein OsI_23948 [Oryza sativa Indi... 66 4e-09
gb|EAZ37852.1| hypothetical protein OsJ_22198 [Oryza sativa Japo... 66 4e-09
emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulga... 66 5e-09
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 66 5e-09
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ... 66 5e-09
gb|EMJ08808.1| hypothetical protein PRUPE_ppa018907mg, partial [... 63 4e-08
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 63 4e-08
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 63 5e-08
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 63 5e-08
gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [... 62 8e-08
gb|EMJ12186.1| hypothetical protein PRUPE_ppa021345mg [Prunus pe... 62 8e-08
gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus pe... 62 8e-08
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise... 62 1e-07
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/87 (49%), Positives = 58/87 (66%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L IL +E+LA++ +A P K IG + TRIPFL F DD MI++K
Sbjct: 647 GIRQGDPLSPYLFILCAELLAREFSKACHEPGKLIGVPIGRTRTRIPFLTFADDTMIFAK 706
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNFH 6
A +C I+ I+D YC +SGQ VN+H
Sbjct: 707 ATEASCHKIRQILDKYCLMSGQLVNYH 733
>ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 727
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLS ++ IL E L ++ + +PR +G +G RI L F DD +I++K
Sbjct: 62 GIRQGDPLSSYIFILCMEPLIREFNKLAEKPRNQVGIVSAPRGPRISNLVFADDCLIFAK 121
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNFH 6
A P +NI + D+ SGQK+NFH
Sbjct: 122 ATPRGARNILKTLSDFATASGQKINFH 148
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP L IL +E+L+ A R R+ G +V G R+ L F DD M +SK
Sbjct: 527 GLRQGDPLSPCLFILCTEVLSGLCTRAQ-RLRQLPGVRVSINGPRVNHLLFADDTMFFSK 585
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNFH 6
++PE+C + I+ Y K SGQ +NFH
Sbjct: 586 SDPESCNKLSEILSRYGKASGQSINFH 612
>gb|EMJ28392.1| hypothetical protein PRUPE_ppa019361mg, partial [Prunus persica]
Length = 954
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/87 (34%), Positives = 50/87 (57%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP++ IL E+ + P+ +GF G RI L F DD +I+++
Sbjct: 418 GIRQGDPLSPYIFILCMELFIRHFNSLAQNPKTHVGFLSSQGGDRISNLVFADDCLIFAR 477
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNFH 6
+ +NI ++D++ K+SGQ++N H
Sbjct: 478 STAMAARNINCLLDNFAKVSGQRINLH 504
>gb|EMJ12193.1| hypothetical protein PRUPE_ppa021032mg [Prunus persica]
Length = 781
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/86 (36%), Positives = 54/86 (62%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L ++ SE+L+ +++A G + G + L F DD + + +
Sbjct: 404 GIRQGDPLSPYLFLIVSEVLSLMIKKACEANHLQ-GLKFGRSGPTLSHLLFADDALFFIR 462
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNF 9
AN +NC+N++ ++D YC+ SGQ++NF
Sbjct: 463 ANTQNCRNMRLLLDGYCRASGQQINF 488
>gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
Length = 1146
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/87 (37%), Positives = 52/87 (59%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L +L SE+L+ + +T G ++ G + L F DD + + +
Sbjct: 543 GLRQGDPLSPYLFLLVSEVLSLNIINSTDTGMLR-GIKLSRGGPELSHLFFADDSLFFLQ 601
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNFH 6
A P NC +K+I++ YC SGQ+VNF+
Sbjct: 602 ATPPNCSALKSIIECYCSASGQEVNFN 628
>ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 813
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Frame = -1
Query: 269 WGCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYS 90
WG + DPLSP+L +LG+E+ + L + ++ G +C I L F DD +++
Sbjct: 132 WGLRQSDPLSPYLFLLGAEVFSALLNQKASQGLLK-GISICDSAPVIHHLLFADDSLLFG 190
Query: 89 KANPENCKNIKNIVDDYCKISGQKVNF 9
AN C +IK ++ DY K SGQ VNF
Sbjct: 191 VANHAECGHIKAVLADYEKASGQLVNF 217
>gb|EEC81099.1| hypothetical protein OsI_23948 [Oryza sativa Indica Group]
Length = 502
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L +L +E L+ LQ A R +G +VC + I L F DD +I +
Sbjct: 45 GLRQGDPLSPYLFLLVAEGLSSMLQGAENRGDL-VGIRVCREAPMISHLLFADDSLILMQ 103
Query: 86 ANPENCKNIKNIVDDYCKISGQKVN 12
A+ N ++K I+D YC+ SGQK++
Sbjct: 104 ADRNNADHLKAILDTYCQNSGQKIS 128
>gb|EAZ37852.1| hypothetical protein OsJ_22198 [Oryza sativa Japonica Group]
Length = 446
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L +L +E L+ LQ A R +G +VC + I L F DD +I +
Sbjct: 45 GLRQGDPLSPYLFLLVAEGLSSMLQGAENRGDL-VGIRVCREAPMISHLLFADDSLILMQ 103
Query: 86 ANPENCKNIKNIVDDYCKISGQKVN 12
A+ N ++K I+D YC+ SGQK++
Sbjct: 104 ADRNNADHLKAILDTYCQNSGQKIS 128
>emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1383
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/87 (37%), Positives = 54/87 (62%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSPFL +L E+L++ + +AT+ G CS+G+ I L + DD +++ +
Sbjct: 630 GLRQGDPLSPFLFVLVGEVLSQMISKATSLQLWR-GIPACSRGSEITHLQYADDTLMFCE 688
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNFH 6
AN + KNI+ + + +SG +VNFH
Sbjct: 689 ANTNSLKNIQKTLIIFQLVSGLQVNFH 715
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 65.9 bits (159), Expect = 5e-09
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L +L +E L+ LQ A R +G +VC + I L F DD +I +
Sbjct: 450 GLRQGDPLSPYLFLLVAEGLSSMLQGAENRGDL-VGIRVCREAPMISHLLFADDSLILMQ 508
Query: 86 ANPENCKNIKNIVDDYCKISGQKVN 12
A+ N ++K I+D YC+ SGQK++
Sbjct: 509 ADKNNADHLKAILDIYCQNSGQKIS 533
>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1185
Score = 65.9 bits (159), Expect = 5e-09
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L +L +E L+ LQ A R +G +VC + I L F DD +I +
Sbjct: 450 GLRQGDPLSPYLFLLVAEGLSSMLQGAENRGDL-VGIRVCREAPMISHLLFADDSLILMQ 508
Query: 86 ANPENCKNIKNIVDDYCKISGQKVN 12
A+ N ++K I+D YC+ SGQK++
Sbjct: 509 ADKNNADHLKAILDIYCQNSGQKIS 533
>gb|EMJ08808.1| hypothetical protein PRUPE_ppa018907mg, partial [Prunus persica]
Length = 1566
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G ++GDPLSP++ IL E + P+ +G G RI F DD +I+++
Sbjct: 1025 GIFQGDPLSPYIFILCMEPFIRHFNLLAQNPKTHVGLLSSQGGDRISNPVFADDCLIFAR 1084
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNFH 6
+ +NI ++D++ K+SGQ++N H
Sbjct: 1085 STAMAARNINCLLDNFAKVSGQRINLH 1111
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/86 (38%), Positives = 49/86 (56%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L IL +E+L +++A R G +V + + L F DD + + K
Sbjct: 416 GLRQGDPLSPYLFILCTEVLIANIRKAE-RQNLITGIKVATPSPAVSHLLFADDSLFFCK 474
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNF 9
AN E C I I+ Y +SGQ++NF
Sbjct: 475 ANKEQCGIILEILKQYESVSGQQINF 500
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/85 (35%), Positives = 50/85 (58%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L ++ SE+L+ +L A + + +G ++C +G + + F DD + + K
Sbjct: 71 GLRQGDPLSPYLFLIISEVLSVRLTRAV-QDKSLLGIKLCRRGPTLSHMFFADDALFFLK 129
Query: 86 ANPENCKNIKNIVDDYCKISGQKVN 12
A N + I +YCK SGQ +N
Sbjct: 130 ATLGNVCRLMEIFKEYCKASGQLIN 154
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/86 (39%), Positives = 48/86 (55%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L ++ +E+L K LQ A + + G +V I L F DD M Y K
Sbjct: 632 GLRQGDPLSPYLFVICTEMLVKMLQSAEQK-NQITGLKVARGAPPISHLLFADDSMFYCK 690
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNF 9
N E I I+++Y SGQ+VN+
Sbjct: 691 VNDEALGQIIRIIEEYSLASGQRVNY 716
>gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
Length = 851
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L +L SE+L+ + +T G ++ G + L F DD + + +
Sbjct: 239 GLRQGDPLSPYLFLLVSEVLSLNIINSTDTGMLR-GIKLSRGGPELSHLFFADDSLFFLQ 297
Query: 86 ANPENCKNIKNIVDDYCKISGQKV 15
A P NC +K+I++ YC SGQ+V
Sbjct: 298 ATPPNCSALKSIIECYCSASGQEV 321
>gb|EMJ12186.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
Length = 759
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDP+SP+L + SE+L+ ++ A G ++ S G + L F DD +I+ K
Sbjct: 26 GIRQGDPISPYLFLFISEVLSLLIKNACETDLLQ-GIKLNSGGPTLSHLLFADDTLIFLK 84
Query: 86 ANPENCKNIKNIVDDYCKISGQKVN 12
A +NC+NI ++ YC SGQ+V+
Sbjct: 85 ATTQNCQNISRLLQAYCAASGQQVS 109
>gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus persica]
Length = 1171
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/87 (33%), Positives = 47/87 (54%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP++ IL E + + +G G RI L F DD +I++K
Sbjct: 643 GIRQGDPLSPYIFILCMEPFIRHFNLLAQNSKTHVGLLSSQGGDRISNLVFADDCLIFAK 702
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNFH 6
+ +NI ++D++ K+SGQ++N H
Sbjct: 703 STAMAARNINCLLDNFAKVSGQRINLH 729
>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
Length = 1503
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = -1
Query: 266 GCYKGDPLSPFLVILGSEILAKKLQEATTRPRKPIGFQVCSQGTRIPFLAFVDDIMIYSK 87
G +GDPLSP+L + +E L+ L+ A + + GF+V +G I L F DD MI+ +
Sbjct: 971 GLRQGDPLSPYLFLFCAEGLSSALR-AAEQSQSITGFRVTRRGPSISHLFFADDAMIFCE 1029
Query: 86 ANPENCKNIKNIVDDYCKISGQKVNFH 6
A+ + +I+ DY + SGQKVN H
Sbjct: 1030 ASCAALSRVSDILQDYERASGQKVNTH 1056