BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032850
         (269 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rume...    89   5e-16
ref|YP_008592640.1| photosystem I assembly protein ycf3 (chlorop...    89   6e-16
gb|AFB70727.1| photosystem I assembly protein Ycf3, partial (chl...    89   6e-16
gb|AAZ03964.1| Ycf3 [Ranunculus macranthus]                            89   8e-16
ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrom...    89   8e-16
gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast)...    88   1e-15
gb|ADD30856.1| putative RF3 protein [Dillenia indica]                  88   1e-15
ref|YP_778493.1| photosystem I assembly protein Ycf3 [Jasminum n...    88   1e-15
ref|YP_008082582.1| hypothetical chloroplast RF34 (chloroplast) ...    88   1e-15
ref|YP_007353916.1| photosystem I assembly protein Ycf3 (chlorop...    88   1e-15
ref|YP_001936518.2| photosystem I assembly protein ycf3 [Fagopyr...    88   1e-15
ref|YP_001718438.1| photosystem I assembly protein Ycf3 [Manihot...    88   1e-15
ref|YP_008999936.1| hypothetical chloroplast RF34 (chloroplast) ...    87   2e-15
ref|YP_008993263.1| hypothetical chloroplast RF34 (chloroplast) ...    87   2e-15
ref|YP_008994480.1| hypothetical chloroplast RF34 (chloroplast) ...    87   2e-15
ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) ...    87   2e-15
gb|AFK81300.1| hypothetical chloroplast RF34 [Camellia sinensis ...    87   2e-15
ref|YP_008963606.1| photosystem I assembly protein Ycf3 (chlorop...    87   2e-15
ref|YP_008814857.1| hypothetical chloroplast RF21 (chloroplast) ...    87   2e-15
gb|AGW96677.1| hypothetical chloroplast RF34 (chloroplast) [Argy...    87   2e-15

>gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rumex acetosa]
          Length = 169

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVI 50
           MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1   MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVM 44


>ref|YP_008592640.1| photosystem I assembly protein ycf3 (chloroplast) [Berberis bealei]
           gi|536462681|gb|AGU37046.1| photosystem I assembly
           protein ycf3 (chloroplast) [Berberis bealei]
          Length = 169

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/44 (95%), Positives = 44/44 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVI 50
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44


>gb|AFB70727.1| photosystem I assembly protein Ycf3, partial (chloroplast) [Mollugo
           verticillata]
          Length = 217

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/44 (95%), Positives = 44/44 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVI 50
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44


>gb|AAZ03964.1| Ycf3 [Ranunculus macranthus]
          Length = 170

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 42/44 (95%), Positives = 43/44 (97%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVI 50
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG I
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 44


>ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrometrica]
           gi|340549408|gb|AEK53230.1| hypothetical chloroplast
           RF34 (chloroplast) [Boea hygrometrica]
          Length = 171

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 42/44 (95%), Positives = 44/44 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVI 50
           MPRSRINGNFIDKTFS+VANILL+IIPTTSGEKEAFTYYRDGVI
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKEAFTYYRDGVI 44


>gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast) [Solanum
           carolinense]
          Length = 44

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 41/44 (93%), Positives = 43/44 (97%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVI 50
           MPRSRINGNFIDKTFS+VANILLR+IPTTSGEKEAFTYYRDG I
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDGAI 44


>gb|ADD30856.1| putative RF3 protein [Dillenia indica]
          Length = 168

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 41/44 (93%), Positives = 44/44 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVI 50
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG++
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGML 44


>ref|YP_778493.1| photosystem I assembly protein Ycf3 [Jasminum nudiflorum]
           gi|122164970|sp|Q06RC8.1|YCF3_JASNU RecName:
           Full=Photosystem I assembly protein Ycf3
           gi|110456226|gb|ABG74631.1| YCF3 protein [Jasminum
           nudiflorum]
          Length = 168

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGV 53
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGI 43


>ref|YP_008082582.1| hypothetical chloroplast RF34 (chloroplast) [Utricularia gibba]
           gi|498921855|gb|AGL61076.1| hypothetical chloroplast
           RF34 (chloroplast) [Utricularia gibba]
          Length = 169

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/44 (93%), Positives = 44/44 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVI 50
           MPRSRINGNFIDKTFS+VANILL+IIPTTSGEKEAFTYYRDGV+
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLKIIPTTSGEKEAFTYYRDGVM 44


>ref|YP_007353916.1| photosystem I assembly protein Ycf3 (chloroplast) [Tectona grandis]
           gi|438687605|emb|CCP47131.1| photosystem I assembly
           protein Ycf3 (chloroplast) [Tectona grandis]
           gi|438688289|emb|CCP47220.1| photosystem I assembly
           protein Ycf3 (chloroplast) [Tectona grandis]
           gi|438688413|emb|CCP47309.1| photosystem I assembly
           protein Ycf3 (chloroplast) [Tectona grandis]
          Length = 169

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/44 (95%), Positives = 44/44 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVI 50
           MPRSRINGNFIDKTFSVVANILL+IIPTTSGEKEAFTYYRDGV+
Sbjct: 1   MPRSRINGNFIDKTFSVVANILLQIIPTTSGEKEAFTYYRDGVM 44


>ref|YP_001936518.2| photosystem I assembly protein ycf3 [Fagopyrum esculentum subsp.
           ancestrale]
          Length = 168

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/43 (97%), Positives = 43/43 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGV 53
           MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1   MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGM 43


>ref|YP_001718438.1| photosystem I assembly protein Ycf3 [Manihot esculenta]
           gi|157695886|gb|ABV66155.1| photosystem I assembly
           protein ycf3 [Manihot esculenta]
          Length = 168

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/43 (97%), Positives = 43/43 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGV 53
           MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1   MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGM 43


>ref|YP_008999936.1| hypothetical chloroplast RF34 (chloroplast) [Agrostemma githago]
           gi|576312302|ref|YP_009000186.1| hypothetical
           chloroplast RF34 (chloroplast) [Silene paradoxa]
           gi|555944022|gb|AGZ17926.1| hypothetical chloroplast
           RF34 (chloroplast) [Agrostemma githago]
           gi|555944275|gb|AGZ18176.1| hypothetical chloroplast
           RF34 (chloroplast) [Silene paradoxa]
          Length = 168

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGV 53
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43


>ref|YP_008993263.1| hypothetical chloroplast RF34 (chloroplast) [Magnolia dealbata]
          Length = 168

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGV 53
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43


>ref|YP_008994480.1| hypothetical chloroplast RF34 (chloroplast) [Hypseocharis bilobata]
           gi|540067559|gb|AGV02910.1| hypothetical chloroplast
           RF34 (chloroplast) [Hypseocharis bilobata]
          Length = 168

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGV 53
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43


>ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) [Penthorum chinense]
           gi|403226782|gb|AFR25661.1| hypothetical chloroplast
           RF34 (chloroplast) [Penthorum chinense]
          Length = 169

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/44 (93%), Positives = 43/44 (97%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVI 50
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAM 44


>gb|AFK81300.1| hypothetical chloroplast RF34 [Camellia sinensis var. assamica]
          Length = 168

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGV 53
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43


>ref|YP_008963606.1| photosystem I assembly protein Ycf3 (chloroplast) [Lupinus luteus]
           gi|485474317|gb|AGK82919.1| photosystem I assembly
           protein Ycf3 (chloroplast) [Lupinus luteus]
          Length = 168

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGV 53
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43


>ref|YP_008814857.1| hypothetical chloroplast RF21 (chloroplast) [Aralia undulata]
           gi|458599091|gb|AGG38957.1| hypothetical chloroplast
           RF21 (chloroplast) [Aralia undulata]
          Length = 168

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGV 53
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43


>gb|AGW96677.1| hypothetical chloroplast RF34 (chloroplast) [Argyreia nervosa]
          Length = 168

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -2

Query: 181 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGV 53
           MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1   MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGL 43