BLASTX nr result

ID: Rheum21_contig00032839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032839
         (473 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273534.2| PREDICTED: squamosa promoter-binding-like pr...    59   7e-07

>ref|XP_002273534.2| PREDICTED: squamosa promoter-binding-like protein 6-like [Vitis
           vinifera]
          Length = 611

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
 Frame = -3

Query: 450 VMEFWKCLNEGKSLFLSEELELPVGVAVNTRNKVSGKEPETLYDTSNCPFVSCQEPIRDQ 271
           +ME W    E K    SEE++L       +R  ++G +  T ++  N   V  ++ +   
Sbjct: 86  LMESWSHALEKKMFLYSEEMDLTTDAVGRSRKLLTGWDMRTPFNFENDGLVLDRDAV--- 142

Query: 270 ESVQFGFSDTLGRIRQANYSDPSRNVLSNHLGLDCYTEVASP-NRVSPDVVSQEKQLGSR 94
           ES++F   D+   +R+   S+PS   LS  +G +    + SP N V+ + +   ++  SR
Sbjct: 143 ESMEFMELDSPDLVRKLLPSNPSVGFLSGEIGRNSSKRIVSPTNMVTSNPIFGGEESSSR 202

Query: 93  MPSLFVGSDCLDLATVDLKLGGLVADSMSAR 1
           + S F+ S+  D + +DLKLG L AD + A+
Sbjct: 203 LSSSFMESNSQDSSIIDLKLGRL-ADCIDAK 232


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