BLASTX nr result

ID: Rheum21_contig00032790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032790
         (269 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004308229.1| PREDICTED: uncharacterized protein LOC101292...    56   4e-06
ref|XP_002523454.1| RNA binding protein, putative [Ricinus commu...    56   4e-06

>ref|XP_004308229.1| PREDICTED: uncharacterized protein LOC101292263 [Fragaria vesca
           subsp. vesca]
          Length = 260

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KNLLWRSLKGFLPCLSNLKQRRVVFTAICPLCPSKIESELHIFKHCSAARQFWSQFPFFS 182
           K LLWR    FLPCL  LK++++   + C  C S +ES LH+   CS A++ WS+  F S
Sbjct: 31  KVLLWRGCNSFLPCLGELKRQKLYENSKCGGCGSAMESVLHVLWECSFAQKVWSR-TFLS 89

Query: 183 DSIALC-PNSFWDWWCSLNNNLSQTQLEFW 269
           +   +   NSF+D +  +    +   LE++
Sbjct: 90  EVCKVWKENSFFDLFAHVGMVANGDDLEWF 119


>ref|XP_002523454.1| RNA binding protein, putative [Ricinus communis]
           gi|223537282|gb|EEF38913.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 446

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 21/57 (36%), Positives = 32/57 (56%)
 Frame = +3

Query: 3   KNLLWRSLKGFLPCLSNLKQRRVVFTAICPLCPSKIESELHIFKHCSAARQFWSQFP 173
           K+ +WR     LPC+ NLK R++    IC  C   +E++ ++FK C   R FW  +P
Sbjct: 140 KHFMWRLNHNLLPCIENLKNRKIDMGEICSRCGGCVETQTYVFKKCQFVRSFWLTYP 196


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