BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032722
         (537 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
gb|EOX97443.1| Pentatricopeptide repeat (PPR) superfamily protei...   113   3e-23
gb|EOX97442.1| Pentatricopeptide repeat (PPR) superfamily protei...   113   3e-23
ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, part...   109   3e-22
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar...   108   6e-22
ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Popu...   107   2e-21
ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citr...   105   5e-21
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l...   105   6e-21
ref|XP_006409347.1| hypothetical protein EUTSA_v10022542mg [Eutr...   105   8e-21
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...   103   3e-20
gb|EMJ01512.1| hypothetical protein PRUPE_ppa001249mg [Prunus pe...    99   6e-19
ref|XP_006350361.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    97   2e-18
gb|ESW31227.1| hypothetical protein PHAVU_002G220400g [Phaseolus...    96   4e-18
ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containi...    92   7e-17
ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containi...    92   1e-16
ref|XP_004231526.1| PREDICTED: pentatricopeptide repeat-containi...    90   3e-16
ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_006847961.1| hypothetical protein AMTR_s00029p00147240 [A...    85   1e-14

>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
            [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
            protein product [Vitis vinifera]
          Length = 878

 Score =  117 bits (293), Expect = 2e-24
 Identities = 56/96 (58%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDG 359
            GL K G+KH+ADE AERM++MAS G V NKI + +     ++  K S +DWQ I+HRDDG
Sbjct: 781  GLGKRGKKHDADELAERMMDMASEGMVENKITRNESAFNRQKRNKFSGSDWQTIIHRDDG 840

Query: 358  SGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGG 251
            SG+AL++LKRVQ GWGQGS   LQ  KND +DYW G
Sbjct: 841  SGLALKALKRVQKGWGQGSISSLQPQKNDFLDYWEG 876


>gb|EOX97443.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
           [Theobroma cacao]
          Length = 632

 Score =  113 bits (282), Expect = 3e-23
 Identities = 59/97 (60%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = -3

Query: 532 LHKCGRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDGS 356
           L K G KHEADE AE+M+EMAS G V NKI    R   HR+  K   +DWQ I+HRDDGS
Sbjct: 536 LGKRGNKHEADELAEKMMEMASDGRVGNKIYLNAREPIHRKEIKFGGDDWQTIVHRDDGS 595

Query: 355 GIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGGNG 245
           GIAL++LKRVQ GWGQGS   LQ  KN   DYW G+G
Sbjct: 596 GIALKALKRVQKGWGQGSISRLQPHKNKFHDYWEGDG 632


>gb|EOX97442.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
            [Theobroma cacao]
          Length = 872

 Score =  113 bits (282), Expect = 3e-23
 Identities = 59/97 (60%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = -3

Query: 532  LHKCGRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDGS 356
            L K G KHEADE AE+M+EMAS G V NKI    R   HR+  K   +DWQ I+HRDDGS
Sbjct: 776  LGKRGNKHEADELAEKMMEMASDGRVGNKIYLNAREPIHRKEIKFGGDDWQTIVHRDDGS 835

Query: 355  GIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGGNG 245
            GIAL++LKRVQ GWGQGS   LQ  KN   DYW G+G
Sbjct: 836  GIALKALKRVQKGWGQGSISRLQPHKNKFHDYWEGDG 872


>ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, partial [Capsella rubella]
            gi|482565669|gb|EOA29858.1| hypothetical protein
            CARUB_v10012952mg, partial [Capsella rubella]
          Length = 881

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/98 (53%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDG 359
            GL K G K EA+ FAE+M+EMAS G V NK+    R    ++ T+H  N+WQNILHRDDG
Sbjct: 784  GLGKMGNKKEANNFAEKMMEMASVGEVANKVDPNARDLHQKKHTRHGGNNWQNILHRDDG 843

Query: 358  SGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGGNG 245
            SGIAL++L RV+ GWGQG     Q  ++D +DYW  +G
Sbjct: 844  SGIALKTLSRVKKGWGQGDISSFQPQRDDYLDYWEDDG 881


>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|330251496|gb|AEC06590.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  108 bits (271), Expect = 6e-22
 Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDG 359
            GL K G K EA+ FA++M+EMAS G V NK+    R    ++  K+  N+WQNILHRDDG
Sbjct: 777  GLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARDIHQKKHNKNGGNNWQNILHRDDG 836

Query: 358  SGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGGNG 245
            SGIALRSL RV+ GWGQG     Q P+ D +DYW  +G
Sbjct: 837  SGIALRSLSRVKKGWGQGDISSFQPPRVDYLDYWEDDG 874


>ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Populus trichocarpa]
            gi|550341611|gb|ERP62640.1| hypothetical protein
            POPTR_0004s21560g [Populus trichocarpa]
          Length = 874

 Score =  107 bits (266), Expect = 2e-21
 Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDG 359
            GL K G KHEADE AE+M+EMAS G V NK+ Q    +   +  K  E++WQ ILHRDDG
Sbjct: 777  GLGKRGNKHEADELAEKMMEMASEGKVKNKVHQNASCSIQGKKNKDGESEWQTILHRDDG 836

Query: 358  SGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGGN 248
            SGIAL++LKRVQ G  QGS   L+  K+D +DYW G+
Sbjct: 837  SGIALKALKRVQRGLDQGSISSLEPQKDDFLDYWEGS 873


>ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Citrus sinensis] gi|568866524|ref|XP_006486605.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g17140-like [Citrus sinensis]
          Length = 889

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
 Frame = -3

Query: 520  GRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDGSGIAL 344
            G+KHEADE AE+M+EM S G V +KI Q       R+  K+  + WQ+ILHR+DGSGIAL
Sbjct: 785  GKKHEADELAEKMMEMTSDGRVAHKISQNAGELVRRKQNKNGGSVWQDILHREDGSGIAL 844

Query: 343  RSLKRVQNGWGQGSTLDLQSPKNDLIDYW 257
            ++LKRVQ GWGQGS   LQ+ K DL+DYW
Sbjct: 845  KTLKRVQKGWGQGSISSLQAQKYDLLDYW 873


>ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citrus clementina]
            gi|557524367|gb|ESR35673.1| hypothetical protein
            CICLE_v10027787mg [Citrus clementina]
          Length = 889

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
 Frame = -3

Query: 520  GRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDGSGIAL 344
            G+KHEADE AE+M+EM S G V +KI Q       R+  K+  + WQ+ILHR+DGSGIAL
Sbjct: 785  GKKHEADELAEKMMEMTSDGRVAHKISQNAGELVRRKQNKNGGSVWQDILHREDGSGIAL 844

Query: 343  RSLKRVQNGWGQGSTLDLQSPKNDLIDYW 257
            ++LKRVQ GWGQGS   LQ+ K DL+DYW
Sbjct: 845  KTLKRVQKGWGQGSISSLQAQKYDLLDYW 873


>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 874

 Score =  105 bits (262), Expect = 6e-21
 Identities = 52/98 (53%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDG 359
            GL K G K EA+ FAE+M+EMAS G V NK+         ++  K+S N+WQNILHRDDG
Sbjct: 777  GLGKMGNKKEANNFAEKMMEMASVGEVANKVDPNATDIHQKKHNKYSGNNWQNILHRDDG 836

Query: 358  SGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGGNG 245
            SGIAL+SL RV+ GWGQG     Q  + D +DYW  +G
Sbjct: 837  SGIALKSLSRVKKGWGQGDISSFQPQRVDYLDYWEDDG 874


>ref|XP_006409347.1| hypothetical protein EUTSA_v10022542mg [Eutrema salsugineum]
            gi|557110509|gb|ESQ50800.1| hypothetical protein
            EUTSA_v10022542mg [Eutrema salsugineum]
          Length = 877

 Score =  105 bits (261), Expect = 8e-21
 Identities = 52/94 (55%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDG 359
            GL K G K EA+ FAE+M+EMAS G V NK+    R     +  K+  N+WQNILHRDDG
Sbjct: 780  GLGKMGNKTEANNFAEKMMEMASVGEVANKVDLNARDLHQTKDNKYGGNNWQNILHRDDG 839

Query: 358  SGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYW 257
            SGIAL+SL RV+ GWGQG     Q P+ D +DYW
Sbjct: 840  SGIALKSLTRVKKGWGQGDISSFQPPRVDYLDYW 873


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score =  103 bits (256), Expect = 3e-20
 Identities = 55/99 (55%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERMLEMASGSVTNKICQYKRVARH--RRLTKHSENDWQNILHRDD 362
            G  K G KH ADE AERM+EMAS S   +   Y  V  H  R   K + NDW  I+HRDD
Sbjct: 777  GFGKMGNKHVADELAERMMEMASES-NKENKAYPNVKGHILRNKNKDAGNDWPIIVHRDD 835

Query: 361  GSGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGGNG 245
            GSGIAL++LKRVQ GWGQGS   LQ  K +  DYW G+G
Sbjct: 836  GSGIALKALKRVQKGWGQGSISSLQPQKLEFFDYWDGSG 874


>gb|EMJ01512.1| hypothetical protein PRUPE_ppa001249mg [Prunus persica]
          Length = 872

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDG 359
            GL K G K EADE AE M++M S G V +K+ + +R     + + +  +DWQ I+HRDDG
Sbjct: 780  GLSKRGNKQEADELAEAMMDMESEGRVGDKVYRIEREIIGGKPSNNGGSDWQTIVHRDDG 839

Query: 358  SGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDY 260
            SGIAL++LKRVQ GWG+GS   LQS KN+ IDY
Sbjct: 840  SGIALKTLKRVQKGWGRGSLTSLQSQKNEFIDY 872


>ref|XP_006350361.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g17140-like [Solanum tuberosum]
          Length = 849

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERMLEMASGS-VTNKICQYKRVARHRRLTKHSENDWQNILHRDDG 359
            GL+K G+KH ADE +ERMLEM S S V NK  Q  R   H + +K+  + WQ I++RDDG
Sbjct: 757  GLNKLGQKHVADELSERMLEMVSESKVGNKAYQNYRELNHMKRSKYGGDGWQAIVYRDDG 816

Query: 358  SGIALRSLKRVQNGWGQGSTLDLQSPKNDLID 263
            S  AL++LKRVQ GWGQGS   LQ+P+  ++D
Sbjct: 817  SAAALKNLKRVQKGWGQGSIXSLQTPRYGILD 848


>gb|ESW31227.1| hypothetical protein PHAVU_002G220400g [Phaseolus vulgaris]
          Length = 886

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 47/98 (47%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERMLEMA-SGSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDG 359
            GL+K G+K +ADE A+RM+E+A      ++ CQ +      +L     +DW++I++RD G
Sbjct: 789  GLNKRGQKQKADELAKRMMELALEDRPVDRTCQNRNRVIPGKLHNDGGSDWKDIVNRDGG 848

Query: 358  SGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGGNG 245
            SGIAL++LKRVQ GWGQGS   LQS  ND +DY+ G+G
Sbjct: 849  SGIALKTLKRVQKGWGQGSITSLQSQPNDFLDYYDGSG 886


>ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            isoform X1 [Glycine max]
          Length = 875

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERM--LEMASGSVTNKICQYKRVARHRRLTKHSENDWQNILHRDD 362
            GL K G K +ADE A+RM  LE+    V       KRV   + L K   +DWQ+I++RD 
Sbjct: 778  GLSKRGNKRQADELAKRMMELELEDRPVDRTYSNRKRVIPGK-LLKDGGSDWQDIINRDA 836

Query: 361  GSGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGGNG 245
            GSGIAL++LKRVQ GWGQGS   LQ  +ND +DY+ G+G
Sbjct: 837  GSGIALKTLKRVQKGWGQGSISSLQPQQNDFLDYYDGSG 875


>ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Cucumis sativus]
          Length = 875

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 48/95 (50%), Positives = 61/95 (64%)
 Frame = -3

Query: 532  LHKCGRKHEADEFAERMLEMASGSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDGSG 353
            L K G KH ADEFAERM+EMAS +  N   +++      RL  + E+DWQ I+HR+DGSG
Sbjct: 783  LGKRGSKHAADEFAERMMEMASETDFN---EHENKNIRGRLNNNDESDWQKIVHRNDGSG 839

Query: 352  IALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGGN 248
            IA ++LKRV  GWGQGS    Q  K    D+W G+
Sbjct: 840  IAQKTLKRVLKGWGQGSIATCQPQKFSTRDHWDGD 874


>ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Cucumis sativus] gi|449472527|ref|XP_004153621.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g17140-like [Cucumis sativus]
          Length = 875

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 48/95 (50%), Positives = 61/95 (64%)
 Frame = -3

Query: 532  LHKCGRKHEADEFAERMLEMASGSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDGSG 353
            L K G KH ADEFAERM+EMAS +  N   +++      RL  + E+DWQ I+HR+DGSG
Sbjct: 783  LGKRGSKHAADEFAERMMEMASETDFN---EHENKNIRGRLNNNDESDWQKIVHRNDGSG 839

Query: 352  IALRSLKRVQNGWGQGSTLDLQSPKNDLIDYWGGN 248
            IA ++LKRV  GWGQGS    Q  K    D+W G+
Sbjct: 840  IAQKTLKRVLKGWGQGSIATSQPQKFSTRDHWDGD 874


>ref|XP_004231526.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Solanum lycopersicum]
          Length = 837

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = -3

Query: 535 GLHKCGRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDG 359
           GL K G+KH ADE  ERMLEM S G V NK  Q  R   H + +K+  + WQ I+HRDDG
Sbjct: 758 GLIKLGQKHVADELTERMLEMVSEGKVGNKTYQNYRELNHMKRSKYGGDGWQAIVHRDDG 817

Query: 358 SGIALRSLKRVQNGWGQGS 302
           S  AL++LKRVQ GWGQGS
Sbjct: 818 SAAALKNLKRVQKGWGQGS 836


>ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Fragaria vesca subsp. vesca]
          Length = 871

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = -3

Query: 535  GLHKCGRKHEADEFAERMLEMAS-GSVTNKICQYKRVARHRRLTKHSENDWQNILHRDDG 359
            GL K G KHEADE AERM+EMAS G + NK+ + +R     +      +DWQ I++RDDG
Sbjct: 780  GLGKKGNKHEADELAERMMEMASEGRIANKVYRSQRDIIGGK-PYSCGSDWQTIVNRDDG 838

Query: 358  SGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDY 260
            SG+ L++LKRVQ GWG+ +   LQ+ K+   DY
Sbjct: 839  SGVILKTLKRVQKGWGRANLTSLQTRKDQFFDY 871


>ref|XP_006847961.1| hypothetical protein AMTR_s00029p00147240 [Amborella trichopoda]
            gi|548851266|gb|ERN09542.1| hypothetical protein
            AMTR_s00029p00147240 [Amborella trichopoda]
          Length = 889

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 14/106 (13%)
 Frame = -3

Query: 532  LHKCGRKHEADEFAERMLEMASGSVTNKICQYKRVARHRR--------LTKHSE------ 395
            L K G KH+AD+ AE M+EMA      K    KR  R R+        +  H +      
Sbjct: 780  LEKNGHKHDADKLAEEMMEMAERYEELKALGLKREKRTRKEGLDGKKSIGNHLKEDGSGG 839

Query: 394  NDWQNILHRDDGSGIALRSLKRVQNGWGQGSTLDLQSPKNDLIDYW 257
            +DWQ++LHRDDGSGIA++ LKR+Q GWGQG+      PK+D+++ W
Sbjct: 840  SDWQSLLHRDDGSGIAMKVLKRIQKGWGQGAIPTSPPPKHDILEDW 885