BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032670
         (419 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006605097.1| PREDICTED: uncharacterized protein LOC100803...   152   4e-35
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]   147   1e-33
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]             145   4e-33
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]             144   1e-32
ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788...   141   8e-32
ref|XP_006603400.1| PREDICTED: uncharacterized protein LOC102659...   141   8e-32
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664...   141   8e-32
ref|XP_006607055.1| PREDICTED: uncharacterized protein LOC100778...   140   1e-31
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624...   140   2e-31
gb|AAD17351.1| contains similarity to retrovirus-related polypro...   137   1e-30
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 134   1e-29
gb|EOX96724.1| Gag-pol polyprotein, putative [Theobroma cacao]        134   1e-29
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   134   1e-29
gb|ABA96215.1| retrotransposon protein, putative, Ty3-gypsy subc...   134   2e-29
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   134   2e-29
ref|XP_004977878.1| PREDICTED: uncharacterized protein LOC101763...   133   2e-29
gb|ABA91262.1| retrotransposon protein, putative, Ty3-gypsy subc...   133   3e-29
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   132   5e-29
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   132   5e-29
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       131   8e-29

>ref|XP_006605097.1| PREDICTED: uncharacterized protein LOC100803456 [Glycine max]
          Length = 732

 Score =  152 bits (384), Expect = 4e-35
 Identities = 69/130 (53%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
 Frame = +1

Query: 28  VTRRILT-VKEATLEDQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDTTP 204
           + RRIL  + + + E QREN+FHT CL++    S+IIDGGSC N+++ ++VK  NL+T P
Sbjct: 227 IVRRILGGIAKKSEESQRENIFHTTCLIQGRVCSLIIDGGSCTNVVSARLVKKMNLETKP 286

Query: 205 HPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRRVL 384
           HP+PY LQW+S      V +Q  I FSIG Y D  LCDV+ M+A+H+LLGRPWQFDR+  
Sbjct: 287 HPRPYKLQWLSEEGELRVDKQVEIQFSIGKYKDKTLCDVVPMEASHVLLGRPWQFDRKAH 346

Query: 385 HDGYLNTYVF 414
           HDG+ N Y+F
Sbjct: 347 HDGHKNKYIF 356


>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
          Length = 818

 Score =  147 bits (371), Expect = 1e-33
 Identities = 68/133 (51%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
 Frame = +1

Query: 22  SLVTRRILTV--KEATLEDQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLD 195
           SLV R  L+   K+  LE QREN+FHTRC +     S+IIDGGSC N+ +  +V++ NL 
Sbjct: 392 SLVARCALSAQAKKDDLEQQRENIFHTRCHINNKVCSMIIDGGSCTNVASTTLVENLNLP 451

Query: 196 TTPHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDR 375
           T  HP+PY LQW++    + V+++ L+ FSIG Y D +LCD++ M A H+LLGRPWQFDR
Sbjct: 452 TLKHPRPYKLQWLNDFGEDKVNKEVLVSFSIGRYKDEVLCDIVPMHAGHILLGRPWQFDR 511

Query: 376 RVLHDGYLNTYVF 414
           +V HDG+ N Y F
Sbjct: 512 KVNHDGFKNRYSF 524


>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score =  145 bits (367), Expect = 4e-33
 Identities = 70/132 (53%), Positives = 91/132 (68%), Gaps = 2/132 (1%)
 Frame = +1

Query: 25  LVTRRIL--TVKEATLEDQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDT 198
           L+ RR+L   +KE     QRENLFHTRC V+    S+IIDGGSC N+ + ++V    L+T
Sbjct: 344 LMVRRMLGSQIKEEDT-GQRENLFHTRCFVQGKVCSLIIDGGSCTNVASTRLVSKLKLET 402

Query: 199 TPHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRR 378
            PHP+PY LQW++ +    V++Q  I F IG Y D +LCDV+ M+A+HLLLGRPWQFDR+
Sbjct: 403 KPHPKPYKLQWLNESVEMLVNKQVEICFKIGKYEDVVLCDVVPMEASHLLLGRPWQFDRK 462

Query: 379 VLHDGYLNTYVF 414
             HDGY N Y F
Sbjct: 463 ANHDGYSNKYSF 474


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score =  144 bits (363), Expect = 1e-32
 Identities = 69/132 (52%), Positives = 90/132 (68%), Gaps = 2/132 (1%)
 Frame = +1

Query: 25  LVTRRIL--TVKEATLEDQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDT 198
           L+ RR+L   +KE     QRENLFH RC V+    S+IIDGGSC N+ + ++V    L+T
Sbjct: 344 LMVRRMLGSQIKEEDTS-QRENLFHIRCFVQGKVCSLIIDGGSCTNVASTRLVSRLKLET 402

Query: 199 TPHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRR 378
            PHP+PY LQW++ +    V++Q  I F IG Y D +LCDV+ M+A+HLLLGRPWQFDR+
Sbjct: 403 KPHPKPYKLQWLNESVEMLVNKQVEICFKIGKYEDVVLCDVVPMEASHLLLGRPWQFDRK 462

Query: 379 VLHDGYLNTYVF 414
             HDGY N Y F
Sbjct: 463 ANHDGYSNKYSF 474


>ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788838 [Glycine max]
          Length = 519

 Score =  141 bits (356), Expect = 8e-32
 Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = +1

Query: 25  LVTRRILTVKEATLED-QRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDTT 201
           L+ RR+L  +   L+D QREN+FHTRC++     S+I+DGGSC N+ +  +V   NL+T 
Sbjct: 366 LMVRRLLGNQMQPLDDNQRENIFHTRCVINGKLCSLIVDGGSCTNVASSTLVTKLNLETK 425

Query: 202 PHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRRV 381
           PHP+PY LQW+S      V++Q  +  +IG Y+D +LCDV+ M+ATH+LLGRPWQ+D + 
Sbjct: 426 PHPRPYKLQWLSEDEEVKVTQQVEVCLTIGRYNDKVLCDVVPMEATHVLLGRPWQYDTKA 485

Query: 382 LHDGYLNTYVF 414
           +HDG+ N   F
Sbjct: 486 VHDGFTNKISF 496


>ref|XP_006603400.1| PREDICTED: uncharacterized protein LOC102659640 [Glycine max]
          Length = 594

 Score =  141 bits (356), Expect = 8e-32
 Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = +1

Query: 25  LVTRRILTVKEATLED-QRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDTT 201
           L+ RR+L  +   L+D QREN+FHTRC++     S+I+DGGSC N+ +  +V   NL+T 
Sbjct: 366 LMVRRLLGNQMQPLDDNQRENIFHTRCVINGKLCSLIVDGGSCTNVASSTLVTKLNLETK 425

Query: 202 PHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRRV 381
           PHP+PY LQW+S      V++Q  +  +IG Y+D +LCDV+ M+ATH+LLGRPWQ+D + 
Sbjct: 426 PHPRPYKLQWLSEDEEIKVTQQVEVCLTIGRYNDKVLCDVVPMEATHVLLGRPWQYDTKA 485

Query: 382 LHDGYLNTYVF 414
           +HDG+ N   F
Sbjct: 486 VHDGFTNKISF 496


>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
          Length = 1176

 Score =  141 bits (356), Expect = 8e-32
 Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = +1

Query: 25  LVTRRILTVKEATLED-QRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDTT 201
           L+ RR+L  +   L+D QREN+FHTRC++     S+I+DGGSC N+ +  +V   NL+T 
Sbjct: 366 LMVRRLLGNQMQPLDDNQRENIFHTRCVINGKLCSLIVDGGSCTNVASSTLVTKLNLETK 425

Query: 202 PHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRRV 381
           PHP+PY LQW+S      V++Q  +  +IG Y+D +LCDV+ M+ATH+LLGRPWQ+D + 
Sbjct: 426 PHPRPYKLQWLSEDEEVKVTQQVEVCLTIGRYNDKVLCDVVPMEATHVLLGRPWQYDTKA 485

Query: 382 LHDGYLNTYVF 414
           +HDG+ N   F
Sbjct: 486 VHDGFTNKISF 496


>ref|XP_006607055.1| PREDICTED: uncharacterized protein LOC100778333, partial [Glycine
           max]
          Length = 560

 Score =  140 bits (354), Expect = 1e-31
 Identities = 63/131 (48%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
 Frame = +1

Query: 25  LVTRRILTVKEATLED-QRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDTT 201
           L+ RR+L  +   L+D QREN+FHTRC++     S+I+DGGSC N+ +  +V   NL+T 
Sbjct: 365 LMVRRLLGNQMQPLDDNQRENIFHTRCVINGKLCSLIVDGGSCTNVASSTLVTKLNLETK 424

Query: 202 PHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRRV 381
           PHP PY LQW+S      V++Q  +  +IG Y+D +LCDV+ M+ATH+LLGRPWQ+D + 
Sbjct: 425 PHPTPYKLQWLSEDEEVKVTQQVEVCLTIGRYNDKVLCDVVPMEATHVLLGRPWQYDTKA 484

Query: 382 LHDGYLNTYVF 414
           +HDG+ N   F
Sbjct: 485 VHDGFTNKISF 495


>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
          Length = 1083

 Score =  140 bits (352), Expect = 2e-31
 Identities = 67/131 (51%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
 Frame = +1

Query: 25  LVTRRILTVK-EATLEDQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDTT 201
           +V RR L  + +   E QR+N+FHTRC +K    S+IIDGGSC N+    +V+  NL T 
Sbjct: 211 MVARRALNTQVKEDAEVQRDNIFHTRCHIKDKVCSMIIDGGSCTNVAITSLVEKLNLKTL 270

Query: 202 PHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRRV 381
            H + Y LQW++      V++Q L+ FSIG Y D +LCDV+ M A H+LLGRPWQ+DRRV
Sbjct: 271 KHSRLYKLQWLNDYGEVKVNKQVLVSFSIGRYKDDVLCDVVPMHAGHILLGRPWQYDRRV 330

Query: 382 LHDGYLNTYVF 414
            HDGYLN Y F
Sbjct: 331 THDGYLNRYSF 341


>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
           zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
           E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
           putative polyprotein [Arabidopsis thaliana]
          Length = 1138

 Score =  137 bits (345), Expect = 1e-30
 Identities = 63/123 (51%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
 Frame = +1

Query: 25  LVTRRILTV-KEATLEDQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDTT 201
           LVT R+L+V  +A  + QRENLFHTRCL+K    S+IIDGGSC N+ +E +V+   L+  
Sbjct: 328 LVTMRVLSVLNKAEEQAQRENLFHTRCLIKGKVCSLIIDGGSCTNVASETMVQKLGLEEF 387

Query: 202 PHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRRV 381
           PHP+PY LQW++ +    V+RQ  +P +IG Y D ILCD++ ++A+H+LLGRPWQ DR+ 
Sbjct: 388 PHPKPYKLQWLNESGEMAVTRQVQVPLAIGKYEDEILCDILPLEASHVLLGRPWQSDRKD 447

Query: 382 LHD 390
             D
Sbjct: 448 YQD 450


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  134 bits (338), Expect = 1e-29
 Identities = 65/134 (48%), Positives = 89/134 (66%), Gaps = 2/134 (1%)
 Frame = +1

Query: 19  LSLVTRRILTVKEATLE-DQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLD 195
           LSLVT R++  +   LE DQR+ +F +RC +K    ++IIDGGSC N+ +  +++  +L 
Sbjct: 365 LSLVTWRVMHTQPQPLEMDQRQQIFRSRCTIKGRVCNLIIDGGSCTNVASSTLIEKLSLP 424

Query: 196 TTPHPQPYGLQWISSTSGNTVSRQCLIPFSIGA-YHDTILCDVIAMDATHLLLGRPWQFD 372
           T  HP PY L+W++  +   V +QCL+ FSIG  Y D  LCDV+ MDA HLLLGRPW+FD
Sbjct: 425 TQDHPSPYKLRWLNKGAEVRVDKQCLVTFSIGKNYSDEALCDVLPMDACHLLLGRPWEFD 484

Query: 373 RRVLHDGYLNTYVF 414
           R  +H G  NTY F
Sbjct: 485 RDSVHHGRDNTYTF 498


>gb|EOX96724.1| Gag-pol polyprotein, putative [Theobroma cacao]
          Length = 794

 Score =  134 bits (337), Expect = 1e-29
 Identities = 68/134 (50%), Positives = 84/134 (62%), Gaps = 3/134 (2%)
 Frame = +1

Query: 22  SLVTRRILTVKEATLEDQ--RENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLD 195
           +LV RR L     T ++   R N+FHTRC  +    +VIID GSC N+I   +VK   L 
Sbjct: 355 ALVVRRNLNTAMLTEDESWLRHNIFHTRCTSQGKVCNVIIDSGSCENVIANYMVKKLKLQ 414

Query: 196 TTPHPQPYGLQWISSTSGNTVSRQCLIPFSIG-AYHDTILCDVIAMDATHLLLGRPWQFD 372
           T  HP PY LQW+   +   V+++C + FSIG  Y D + CDVI MDA HLLLGRPWQ+D
Sbjct: 415 TEVHPHPYKLQWLRKGNEVKVTKRCCVQFSIGNKYEDEVWCDVIPMDACHLLLGRPWQYD 474

Query: 373 RRVLHDGYLNTYVF 414
           RR  HDGY NTY F
Sbjct: 475 RRAHHDGYKNTYSF 488


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1616

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/132 (48%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
 Frame = +1

Query: 22  SLVTRRILTVK-EATLEDQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDT 198
           SLV +R+L+ + E   ++QR  LF T+C++K  S  VIIDGGSC N+ + ++V+   L T
Sbjct: 468 SLVVQRVLSAQMERAEQNQRHTLFQTKCVIKERSCRVIIDGGSCNNLASAEMVEKLALST 527

Query: 199 TPHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRR 378
            PHPQPY +QW++S+    V+R   + F+IG+YHD+I CDV+ M A  +LLGRPWQFD+ 
Sbjct: 528 QPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSMLLGRPWQFDKD 587

Query: 379 VLHDGYLNTYVF 414
            LH G  N Y F
Sbjct: 588 SLHFGKSNQYSF 599


>gb|ABA96215.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 767

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/132 (49%), Positives = 88/132 (66%), Gaps = 1/132 (0%)
 Frame = +1

Query: 22  SLVTRRILTVKEATLE-DQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDT 198
           SL+ +  L+ KE   E +QR NLF ++ LVK  ++ +IID GSC N+ +E++VK   L T
Sbjct: 440 SLIVKLALSAKEKCEEQNQRHNLFQSKVLVKGHTVKMIIDSGSCNNLASEEMVKKLGLTT 499

Query: 199 TPHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRR 378
            PHP PY +QW ++     V+R   IPFSIG+YHD I CDV+ M A  ++LGRPWQ+DR 
Sbjct: 500 HPHPHPYHIQWFNTCGKMKVTRLVKIPFSIGSYHDQIECDVVHMQACSVILGRPWQYDRE 559

Query: 379 VLHDGYLNTYVF 414
           V+ DG  NTY F
Sbjct: 560 VVFDGRTNTYKF 571


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  134 bits (336), Expect = 2e-29
 Identities = 63/128 (49%), Positives = 82/128 (64%)
 Frame = +1

Query: 25  LVTRRILTVKEATLEDQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDTTP 204
           +V + + T+     E+QREN+F+ +C +  A+ S IIDGGSC N+I+E VV    + T  
Sbjct: 384 VVHKALSTLVVLDQEEQRENIFYGKCKIPGATCSFIIDGGSCTNVISEDVVNAMKIPTIQ 443

Query: 205 HPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRRVL 384
           HPQPY LQW++      V +Q LI  SIG Y D +LCDVI M A H+LLGRPWQ+DR  L
Sbjct: 444 HPQPYKLQWLNDDGELKVHKQALISISIGKYQDDVLCDVIPMHACHILLGRPWQYDRDTL 503

Query: 385 HDGYLNTY 408
           H G  N Y
Sbjct: 504 HHGKTNKY 511


>ref|XP_004977878.1| PREDICTED: uncharacterized protein LOC101763064 [Setaria italica]
          Length = 1131

 Score =  133 bits (335), Expect = 2e-29
 Identities = 66/138 (47%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
 Frame = +1

Query: 4   HAGTPLSLVTRRILTVK-EATLEDQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVK 180
           HA    SLV +R+L+ + E   ++QR  LF T+C++K  S  VIIDGGSC N+ + ++V+
Sbjct: 461 HAENYESLVVQRVLSAQMEKAEQNQRHTLFQTKCVIKERSCRVIIDGGSCNNLASAEMVE 520

Query: 181 HFNLDTTPHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRP 360
              L T PHPQPY +QW++S+    V+R   + F+IG+YHD+I CDV+ M A  +LLGRP
Sbjct: 521 KLALCTQPHPQPYYIQWLNSSGKVKVTRLVRVNFAIGSYHDSIDCDVVPMQACSMLLGRP 580

Query: 361 WQFDRRVLHDGYLNTYVF 414
           WQFD   LH G  N Y F
Sbjct: 581 WQFDIDSLHHGKTNQYSF 598


>gb|ABA91262.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 767

 Score =  133 bits (334), Expect = 3e-29
 Identities = 65/132 (49%), Positives = 87/132 (65%), Gaps = 1/132 (0%)
 Frame = +1

Query: 22  SLVTRRILTVKEATLE-DQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDT 198
           SL+ +  L+ KE   E +QR NLF ++ LVK  ++ +IID GSC N+ +E++VK   L T
Sbjct: 440 SLIVKLALSAKEKCEEQNQRHNLFQSKVLVKGHTVKMIIDSGSCNNLASEEMVKKLGLTT 499

Query: 199 TPHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRR 378
            PHP PY +QW  +     V+R   IPFSIG+YHD I CDV+ M A  ++LGRPWQ+DR 
Sbjct: 500 HPHPHPYHIQWFHTCGKMKVTRLVKIPFSIGSYHDQIECDVVHMQACSVILGRPWQYDRE 559

Query: 379 VLHDGYLNTYVF 414
           V+ DG  NTY F
Sbjct: 560 VVFDGRTNTYKF 571


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  132 bits (332), Expect = 5e-29
 Identities = 60/128 (46%), Positives = 84/128 (65%), Gaps = 1/128 (0%)
 Frame = +1

Query: 28  VTRRILTVKEATLED-QRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDTTP 204
           V RRI+T+   ++++ QRENLFHTRC +K  + S+IIDGGSC N+++  +V    +    
Sbjct: 402 VVRRIMTINLGSVDEGQRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIACMK 461

Query: 205 HPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRRVL 384
              PY LQW++      V++QC+I F++G Y D ILCDV+ M A H+LLGRPWQ+DR   
Sbjct: 462 RSTPYRLQWLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTT 521

Query: 385 HDGYLNTY 408
           H G  N Y
Sbjct: 522 HHGRKNRY 529


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  132 bits (332), Expect = 5e-29
 Identities = 60/128 (46%), Positives = 84/128 (65%), Gaps = 1/128 (0%)
 Frame = +1

Query: 28  VTRRILTVKEATLED-QRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDTTP 204
           V RRI+T+   ++++ QRENLFHTRC +K  + S+IIDGGSC N+++  +V    +    
Sbjct: 402 VVRRIMTINLGSVDEGQRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIACMK 461

Query: 205 HPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRRVL 384
              PY LQW++      V++QC+I F++G Y D ILCDV+ M A H+LLGRPWQ+DR   
Sbjct: 462 RSTPYRLQWLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTT 521

Query: 385 HDGYLNTY 408
           H G  N Y
Sbjct: 522 HHGRKNRY 529


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  131 bits (330), Expect = 8e-29
 Identities = 63/132 (47%), Positives = 89/132 (67%), Gaps = 1/132 (0%)
 Frame = +1

Query: 22  SLVTRRILTVK-EATLEDQRENLFHTRCLVKTASLSVIIDGGSCCNIINEKVVKHFNLDT 198
           SLV +R+L+ + E   ++Q   LF T+C++K  S  VIIDGGSC N+ + ++V+   L T
Sbjct: 468 SLVVQRVLSAQMERAEQNQLHTLFQTKCVIKERSCHVIIDGGSCNNLASAEMVEKLALST 527

Query: 199 TPHPQPYGLQWISSTSGNTVSRQCLIPFSIGAYHDTILCDVIAMDATHLLLGRPWQFDRR 378
            PHPQPY +QW++S+    V+R   + F+IG+YHD+I CDV+ M A  +LLGRPWQFD+ 
Sbjct: 528 QPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSMLLGRPWQFDKD 587

Query: 379 VLHDGYLNTYVF 414
            LH G  N Y F
Sbjct: 588 SLHFGKSNQYSF 599