BLASTX nr result
ID: Rheum21_contig00032594
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00032594 (330 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EMJ08360.1| hypothetical protein PRUPE_ppa023606mg [Prunus pe... 89 6e-16 ref|XP_002319538.2| hypothetical protein POPTR_0013s02200g [Popu... 88 1e-15 ref|NP_187185.2| pentatricopeptide repeat-containing protein [Ar... 86 7e-15 ref|XP_002884507.1| pentatricopeptide repeat-containing protein ... 86 7e-15 gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thal... 86 7e-15 ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14 ref|XP_006577247.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14 ref|XP_006299192.1| hypothetical protein CARUB_v10015337mg [Caps... 83 3e-14 ref|XP_006472016.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-14 ref|XP_006433326.1| hypothetical protein CICLE_v10000527mg [Citr... 83 4e-14 ref|XP_004304994.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13 ref|XP_006408086.1| hypothetical protein EUTSA_v10020234mg [Eutr... 79 5e-13 gb|ESW19045.1| hypothetical protein PHAVU_006G092000g [Phaseolus... 75 7e-12 gb|EXC40551.1| hypothetical protein L484_000424 [Morus notabilis] 75 1e-11 ref|XP_004494620.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11 ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat... 74 2e-11 ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11 gb|EOY11338.1| Tetratricopeptide repeat-like superfamily protein... 72 6e-11 ref|XP_004230191.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10 ref|XP_003626292.1| Pentatricopeptide repeat-containing protein ... 69 5e-10 >gb|EMJ08360.1| hypothetical protein PRUPE_ppa023606mg [Prunus persica] Length = 646 Score = 89.0 bits (219), Expect = 6e-16 Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 7/107 (6%) Frame = +1 Query: 28 MKSRWVF-------HKLKPSNSSLFSTVQCITPPSLSSLSNRNIPLLSHVDLSGLLSTCG 186 MKSRWVF H L SSL S + + S+ + + +L+HVD+S LLS CG Sbjct: 1 MKSRWVFQFQNLNSHYLSSWASSLISPFKAKVQQNPSAETTSRL-ILNHVDISLLLSLCG 59 Query: 187 REGKLQLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 +EG LGSSLHASIIKN + + P +YR +VVWNSLLS+Y KC Sbjct: 60 KEGNFHLGSSLHASIIKNPEFFYPESQDDYRYVLVVWNSLLSVYLKC 106 >ref|XP_002319538.2| hypothetical protein POPTR_0013s02200g [Populus trichocarpa] gi|550324744|gb|EEE95461.2| hypothetical protein POPTR_0013s02200g [Populus trichocarpa] Length = 670 Score = 87.8 bits (216), Expect = 1e-15 Identities = 52/104 (50%), Positives = 65/104 (62%), Gaps = 5/104 (4%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQCITPPSLSSL-----SNRNIPLLSHVDLSGLLSTCGRE 192 MKS+WV HKL NS + S +T P + S + LL+HVD+ LLS CGRE Sbjct: 1 MKSKWVIHKL---NSHIPSWATSLTSPLKAKTYHTPSSKTSSFLLNHVDIGHLLSICGRE 57 Query: 193 GKLQLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAK 324 G L LGSSLHASIIK ++ ++P +N V+WNSLLSMYAK Sbjct: 58 GYLHLGSSLHASIIKTHEFFNPL----EQNAFVIWNSLLSMYAK 97 >ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g05340 gi|332640702|gb|AEE74223.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 658 Score = 85.5 bits (210), Expect = 7e-15 Identities = 51/103 (49%), Positives = 62/103 (60%), Gaps = 3/103 (2%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQCITPPSLSSLSNRNIP--LLSHVDLSGLLSTCGREGKL 201 M SRWV KL S STV + + N + LL+HVD+S LLS CGREG Sbjct: 1 MNSRWVIQKLTSHLPSCLSTVLSPSKILIRQSPNYQVSTFLLNHVDMSLLLSICGREGWF 60 Query: 202 -QLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 LG LHASIIKN + ++P +RN +VVWNSLLS+YAKC Sbjct: 61 PHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKC 103 >ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297330347|gb|EFH60766.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 676 Score = 85.5 bits (210), Expect = 7e-15 Identities = 54/108 (50%), Positives = 63/108 (58%), Gaps = 8/108 (7%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQCITPPSLSSLSNRNIP-------LLSHVDLSGLLSTCG 186 M SRWV KL S FSTV S S + R P LL+HVD+S LLS CG Sbjct: 1 MNSRWVIQKLTSHLPSCFSTVL-----SPSKILIRQSPSYQVSTFLLNHVDMSLLLSICG 55 Query: 187 REGKLQ-LGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 REG LG LHASI+KN + +DP +RN +VVWNSLLS+Y KC Sbjct: 56 REGWFPYLGPCLHASIVKNPEFFDPVDADIHRNALVVWNSLLSLYVKC 103 >gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thaliana] Length = 770 Score = 85.5 bits (210), Expect = 7e-15 Identities = 51/103 (49%), Positives = 62/103 (60%), Gaps = 3/103 (2%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQCITPPSLSSLSNRNIP--LLSHVDLSGLLSTCGREGKL 201 M SRWV KL S STV + + N + LL+HVD+S LLS CGREG Sbjct: 1 MNSRWVIQKLTSHLPSCLSTVLSPSKILIRQSPNYQVSTFLLNHVDMSLLLSICGREGWF 60 Query: 202 -QLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 LG LHASIIKN + ++P +RN +VVWNSLLS+YAKC Sbjct: 61 PHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKC 103 >ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340 [Vitis vinifera] Length = 656 Score = 84.0 bits (206), Expect = 2e-14 Identities = 51/105 (48%), Positives = 63/105 (60%), Gaps = 5/105 (4%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQCITPPSLSSL-----SNRNIPLLSHVDLSGLLSTCGRE 192 MK +W F KL NS L ++ P + + S + ++ VD+S LLS CGRE Sbjct: 1 MKPKWFFQKL---NSFLPYCTSPVSSPLKTLILQNPYSETSKFAINQVDISFLLSLCGRE 57 Query: 193 GKLQLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 G L LGSSLHASIIKN+ D N RN IVVWNSLLSMY++C Sbjct: 58 GYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRC 102 >ref|XP_006577247.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like [Glycine max] Length = 656 Score = 83.6 bits (205), Expect = 3e-14 Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 2/102 (1%) Frame = +1 Query: 28 MKSRWVFHKLKPS--NSSLFSTVQCITPPSLSSLSNRNIPLLSHVDLSGLLSTCGREGKL 201 MKSRW F+ PS +S + ++ P S + + +L+H DLS LLS CGR+G L Sbjct: 1 MKSRWKFNAHLPSWMDSLIIPSIMKKPPTSQNPFPATSKSVLNHADLSSLLSVCGRDGNL 60 Query: 202 QLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 LGSS+HA IIK S+D + R+ + VWNSLLSMY+KC Sbjct: 61 NLGSSIHARIIKQPPSFD--FDSSPRDALFVWNSLLSMYSKC 100 >ref|XP_006299192.1| hypothetical protein CARUB_v10015337mg [Capsella rubella] gi|482567901|gb|EOA32090.1| hypothetical protein CARUB_v10015337mg [Capsella rubella] Length = 661 Score = 83.2 bits (204), Expect = 3e-14 Identities = 53/108 (49%), Positives = 61/108 (56%), Gaps = 8/108 (7%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQCITPPSLSSLSNRNIP-------LLSHVDLSGLLSTCG 186 M SRWV KL S STV S S + R P LL+HVDLS LLS CG Sbjct: 1 MNSRWVIQKLSSHLPSCLSTVL-----SPSKILIRQSPRYQVSTFLLNHVDLSHLLSICG 55 Query: 187 REGKL-QLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 REG LG LHASI+KN + ++P +RN +VVWNSLLS Y KC Sbjct: 56 REGWFPHLGPCLHASIVKNPEFFEPVDADIHRNALVVWNSLLSQYVKC 103 >ref|XP_006472016.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like [Citrus sinensis] Length = 899 Score = 82.8 bits (203), Expect = 4e-14 Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 5/105 (4%) Frame = +1 Query: 28 MKSRWVFHKLK---PSNSSLFST--VQCITPPSLSSLSNRNIPLLSHVDLSGLLSTCGRE 192 MKS+WVF KL P SSL S + I P+ S+ + L ++VD+S LLS +E Sbjct: 1 MKSKWVFQKLNSNFPFCSSLISPFITKIIQDPTSST---SKLVLDNYVDISRLLSISAKE 57 Query: 193 GKLQLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 G LG SLHAS IK ++S+D + YN N V+WNSLLS Y KC Sbjct: 58 GHFHLGPSLHASFIKTFESFDNQNVYNVPNATVIWNSLLSFYLKC 102 >ref|XP_006433326.1| hypothetical protein CICLE_v10000527mg [Citrus clementina] gi|557535448|gb|ESR46566.1| hypothetical protein CICLE_v10000527mg [Citrus clementina] Length = 659 Score = 82.8 bits (203), Expect = 4e-14 Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 5/105 (4%) Frame = +1 Query: 28 MKSRWVFHKLK---PSNSSLFST--VQCITPPSLSSLSNRNIPLLSHVDLSGLLSTCGRE 192 MKS+WVF KL P SSL S + I P+ S+ + L ++VD+S LLS +E Sbjct: 1 MKSKWVFQKLNSNFPFCSSLISPFITKIIQDPTSST---SKLVLDNYVDISRLLSISAKE 57 Query: 193 GKLQLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 G LG SLHAS IK ++S+D + YN N V+WNSLLS Y KC Sbjct: 58 GHFHLGPSLHASFIKTFESFDNQNVYNVPNATVIWNSLLSFYLKC 102 >ref|XP_004304994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like [Fragaria vesca subsp. vesca] Length = 651 Score = 81.6 bits (200), Expect = 1e-13 Identities = 49/102 (48%), Positives = 64/102 (62%), Gaps = 2/102 (1%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQCITPPSL--SSLSNRNIPLLSHVDLSGLLSTCGREGKL 201 MKS+WVFH S FS + SL + +S + +L+HVD++ LLS CG+ Sbjct: 1 MKSKWVFH-FHNLTSHYFSPSWLSSISSLFKNPISETSPLVLNHVDVTLLLSFCGKNRHF 59 Query: 202 QLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 QLGSSLHASIIKN + ++P RN +V+WNSLLSMY KC Sbjct: 60 QLGSSLHASIIKNPELFEP----ENRNVVVLWNSLLSMYLKC 97 >ref|XP_006408086.1| hypothetical protein EUTSA_v10020234mg [Eutrema salsugineum] gi|567202871|ref|XP_006408087.1| hypothetical protein EUTSA_v10020234mg [Eutrema salsugineum] gi|557109232|gb|ESQ49539.1| hypothetical protein EUTSA_v10020234mg [Eutrema salsugineum] gi|557109233|gb|ESQ49540.1| hypothetical protein EUTSA_v10020234mg [Eutrema salsugineum] Length = 661 Score = 79.3 bits (194), Expect = 5e-13 Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 3/102 (2%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQCITPPSLSSLSNRNIP--LLSHVDLSGLLSTCGREGKL 201 M SRW+ KL S STV C + + N + LL+HVD+S LLS CG+EG Sbjct: 1 MNSRWMIQKLTSHLPSFLSTVLCPSKILIRQSPNCQVSTFLLNHVDISRLLSICGKEGCF 60 Query: 202 -QLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAK 324 LG +HASI+KN + ++P +RN +VVWNSLL++Y + Sbjct: 61 PHLGPCIHASIVKNPEFFEPVDADIHRNALVVWNSLLALYVR 102 >gb|ESW19045.1| hypothetical protein PHAVU_006G092000g [Phaseolus vulgaris] Length = 599 Score = 75.5 bits (184), Expect = 7e-12 Identities = 46/101 (45%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Frame = +1 Query: 28 MKSRWVFHKLKPS-NSSLFSTVQCITPPSLSSLSNRNIPLLSHVDLSGLLSTCGREGKLQ 204 MKSRW F+ PS SL P + + L+H DLS LLS CGR+G L Sbjct: 1 MKSRWNFNAHLPSWLDSLNIPFTMKAPTFQNPFPATSKSALNHADLSSLLSVCGRDGNLN 60 Query: 205 LGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 LGSS+HA +IK YD + RN + VWNSLL MY+KC Sbjct: 61 LGSSIHARVIKQPPFYD--YDGSPRNALFVWNSLLCMYSKC 99 >gb|EXC40551.1| hypothetical protein L484_000424 [Morus notabilis] Length = 656 Score = 74.7 bits (182), Expect = 1e-11 Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 4/104 (3%) Frame = +1 Query: 28 MKSRWVFHKLK---PS-NSSLFSTVQCITPPSLSSLSNRNIPLLSHVDLSGLLSTCGREG 195 MKSRWVF L PS SSL S + + SS ++ + L+HV +S LL CGR+G Sbjct: 1 MKSRWVFLSLSSRLPSWASSLLSPFKARIHENPSSQTSTFV--LNHVAISRLLPHCGRQG 58 Query: 196 KLQLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 +LGSS+ AS+IK Y+ D RN +VVWNSLL MY++C Sbjct: 59 YFRLGSSIQASLIKQYEFLDSENKDIIRNSLVVWNSLLFMYSQC 102 >ref|XP_004494620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like [Cicer arietinum] Length = 661 Score = 74.3 bits (181), Expect = 2e-11 Identities = 46/104 (44%), Positives = 58/104 (55%), Gaps = 4/104 (3%) Frame = +1 Query: 28 MKSRWVFHKLKPS---NSSLFSTVQCITPP-SLSSLSNRNIPLLSHVDLSGLLSTCGREG 195 MKSRW + PS SL + I PP S + + PL +H L+ LLS CGR+ Sbjct: 1 MKSRWKLNTNLPSWLDFDSLNLPLNLINPPTSQYPFPSTSKPLFNHAHLTSLLSLCGRDK 60 Query: 196 KLQLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 LGSS+HA IIK S D + RN + +WNSLLSMY+KC Sbjct: 61 NFTLGSSIHAHIIKQPPSLD--FHSSQRNALFIWNSLLSMYSKC 102 >ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Cucumis sativus] Length = 833 Score = 74.3 bits (181), Expect = 2e-11 Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 6/106 (5%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQCITPPSLSSLSNRNIP------LLSHVDLSGLLSTCGR 189 MK +WVF K +S L S V + P + P +L+H+D S LLS CGR Sbjct: 1 MKLKWVFQK---RSSHLPSWVTSLISPFRNQFHQNPFPETSSTFVLNHLDPSFLLSICGR 57 Query: 190 EGKLQLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 EG L LGSSLHASIIK+++ N+ N +V+ NSL+SMY +C Sbjct: 58 EGNLHLGSSLHASIIKSFE------LSNHYNGVVIMNSLISMYDRC 97 >ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like [Cucumis sativus] Length = 838 Score = 74.3 bits (181), Expect = 2e-11 Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 6/106 (5%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQCITPPSLSSLSNRNIP------LLSHVDLSGLLSTCGR 189 MK +WVF K +S L S V + P + P +L+H+D S LLS CGR Sbjct: 1 MKLKWVFQK---RSSHLPSWVTSLISPFRNQFHQNPFPETSSTFVLNHLDPSFLLSICGR 57 Query: 190 EGKLQLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 EG L LGSSLHASIIK+++ N+ N +V+ NSL+SMY +C Sbjct: 58 EGNLHLGSSLHASIIKSFE------LSNHYNGVVIMNSLISMYDRC 97 >gb|EOY11338.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao] Length = 762 Score = 72.4 bits (176), Expect = 6e-11 Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 9/109 (8%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQC-ITPPSLSSLSNRNIP--LLSHVDLSGLLSTCGREGK 198 MKS W+F KL P S FS++ L + + P L+H+ +S LLS G++G Sbjct: 1 MKSEWIFQKLTPHLPSCFSSILSPFRTQKLYQFPSSDAPKLALNHIGISLLLSISGKQGF 60 Query: 199 LQLGSSLHASIIKNYDSYDPRIC------YNYRNCIVVWNSLLSMYAKC 327 + LGSS+HAS+IKN P IC N N ++VWNSLL M +KC Sbjct: 61 VLLGSSIHASLIKN-----PEICKPAGGFRNSDNALLVWNSLLGMCSKC 104 >ref|XP_004230191.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like [Solanum lycopersicum] Length = 667 Score = 71.2 bits (173), Expect = 1e-10 Identities = 43/100 (43%), Positives = 61/100 (61%) Frame = +1 Query: 28 MKSRWVFHKLKPSNSSLFSTVQCITPPSLSSLSNRNIPLLSHVDLSGLLSTCGREGKLQL 207 M + W+F KP SS S + P SS+ + P+ S +S LLST GREG ++L Sbjct: 1 MNTGWMFLNPKPGFSSYLSCLFFHFRP-FSSIKPPSFPVNSARGISLLLSTSGREGNVRL 59 Query: 208 GSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYAKC 327 GSS+HASI+K+ + Y+ ++ VVWNSLL+MYA+C Sbjct: 60 GSSIHASILKDPELVLLGNQYSTQDAFVVWNSLLTMYARC 99 >ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 650 Score = 69.3 bits (168), Expect = 5e-10 Identities = 34/62 (54%), Positives = 44/62 (70%) Frame = +1 Query: 142 LLSHVDLSGLLSTCGREGKLQLGSSLHASIIKNYDSYDPRICYNYRNCIVVWNSLLSMYA 321 LL+H DL+ LL+ CGR+ L LGSS+HA IIK S+D + RN + +WNSLLSMY+ Sbjct: 31 LLNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFD--FDGSQRNALFIWNSLLSMYS 88 Query: 322 KC 327 KC Sbjct: 89 KC 90